RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
CDC42EP3-206ENST00000611976 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
CDC42EP3-206ENST00000611976 ARID3AQ99856 593 aa13.36□□□□□ -0.27
CDC42EP3-206ENST00000611976 MCTP1Q6DN14 999 aa13.36□□□□□ -0.27
CDC42EP3-206ENST00000611976 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
CDC42EP3-206ENST00000611976 NASPP49321 788 aaPredicted RBP13.35□□□□□ -0.27
CDC42EP3-206ENST00000611976 RUFY2Q8WXA3 655 aa13.35□□□□□ -0.27
CDC42EP3-206ENST00000611976 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
CDC42EP3-206ENST00000611976 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
CDC42EP3-206ENST00000611976 RABEP1Q15276 862 aa13.34□□□□□ -0.27
CDC42EP3-206ENST00000611976 DIAPH3Q9NSV4 1193 aa13.33□□□□□ -0.27
CDC42EP3-206ENST00000611976 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 PLB1Q6P1J6 1458 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 LRPPRCP42704 1394 aaKnown RBP13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 HMOX1P09601 288 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
CDC42EP3-206ENST00000611976 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
CDC42EP3-206ENST00000611976 CHMP4CQ96CF2 233 aa13.32□□□□□ -0.28
CDC42EP3-206ENST00000611976 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
CDC42EP3-206ENST00000611976 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
CDC42EP3-206ENST00000611976 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
CDC42EP3-206ENST00000611976 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
CDC42EP3-206ENST00000611976 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
CDC42EP3-206ENST00000611976 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
CDC42EP3-206ENST00000611976 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42EP3-206ENST00000611976 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
CDC42EP3-206ENST00000611976 MCM4P33991 863 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 DUSP27Q5VZP5 1158 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 MBD3O95983 291 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 MCM2P49736 904 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
CDC42EP3-206ENST00000611976 TPM2P07951 284 aa13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 FKBP5Q13451 457 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 H3BQV1 296 aa13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
CDC42EP3-206ENST00000611976 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 TWISTNBQ3B726 338 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 CCDC34Q96HJ3 373 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 GRPEL1Q9HAV7 217 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 CWC22Q9HCG8 908 aaKnown RBP13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
CDC42EP3-206ENST00000611976 PARD3Q8TEW0 1356 aa13.27□□□□□ -0.28
CDC42EP3-206ENST00000611976 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.28
CDC42EP3-206ENST00000611976 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.29
CDC42EP3-206ENST00000611976 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 MTERF4Q7Z6M4 381 aaKnown RBP13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 TEFQ10587 303 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 ATAD2Q6PL18 1390 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 RNF20Q5VTR2 975 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
CDC42EP3-206ENST00000611976 GNAI3P08754 354 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 IFIT2P09913 472 aaKnown RBP13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 ERC2O15083 957 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 BECN2A8MW95 431 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 NUP160Q12769 1436 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 C1orf141Q5JVX7 400 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
CDC42EP3-206ENST00000611976 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
CDC42EP3-206ENST00000611976 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
CDC42EP3-206ENST00000611976 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
CDC42EP3-206ENST00000611976 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
CDC42EP3-206ENST00000611976 FCHSD2O94868 740 aa13.23□□□□□ -0.29
CDC42EP3-206ENST00000611976 TPM3P06753 285 aa13.23□□□□□ -0.29
CDC42EP3-206ENST00000611976 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
CDC42EP3-206ENST00000611976 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
CDC42EP3-206ENST00000611976 DHX29Q7Z478 1369 aaKnown RBP13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 NEK4P51957 841 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms