RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
FAM228B-207ENST00000611917 SOCS7O14512 581 aa17.97■□□□□ 0.47
FAM228B-207ENST00000611917 DDX17Q92841 729 aaKnown RBP17.96■□□□□ 0.47
FAM228B-207ENST00000611917 NUTM2BA6NNL0 878 aaPredicted RBP17.95■□□□□ 0.46
FAM228B-207ENST00000611917 NUTM2EB1AL46 878 aaPredicted RBP17.95■□□□□ 0.46
FAM228B-207ENST00000611917 NUTM2AQ8IVF1 878 aaPredicted RBP17.95■□□□□ 0.46
FAM228B-207ENST00000611917 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
FAM228B-207ENST00000611917 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
FAM228B-207ENST00000611917 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
FAM228B-207ENST00000611917 FOXO3O43524 673 aa17.94■□□□□ 0.46
FAM228B-207ENST00000611917 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
FAM228B-207ENST00000611917 PHLPP1O60346 1717 aa17.93■□□□□ 0.46
FAM228B-207ENST00000611917 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
FAM228B-207ENST00000611917 PSME1Q06323 249 aa17.92■□□□□ 0.46
FAM228B-207ENST00000611917 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
FAM228B-207ENST00000611917 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
FAM228B-207ENST00000611917 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
FAM228B-207ENST00000611917 RGS17Q9UGC6 210 aaPredicted RBP17.91■□□□□ 0.46
FAM228B-207ENST00000611917 IFT172Q9UG01 1749 aa17.91■□□□□ 0.46
FAM228B-207ENST00000611917 ASXL1Q8IXJ9 1541 aa17.91■□□□□ 0.46
FAM228B-207ENST00000611917 PHF8Q9UPP1 1060 aa17.9■□□□□ 0.46
FAM228B-207ENST00000611917 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
FAM228B-207ENST00000611917 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
FAM228B-207ENST00000611917 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
FAM228B-207ENST00000611917 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
FAM228B-207ENST00000611917 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
FAM228B-207ENST00000611917 NBPF1Q3BBV0 1214 aa17.87■□□□□ 0.45
FAM228B-207ENST00000611917 LAMC1P11047 1609 aa17.86■□□□□ 0.45
FAM228B-207ENST00000611917 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
FAM228B-207ENST00000611917 NGLY1Q96IV0 654 aa17.85■□□□□ 0.45
FAM228B-207ENST00000611917 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
FAM228B-207ENST00000611917 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
FAM228B-207ENST00000611917 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
FAM228B-207ENST00000611917 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
FAM228B-207ENST00000611917 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
FAM228B-207ENST00000611917 ADAMTS2O95450 1211 aa17.83■□□□□ 0.44
FAM228B-207ENST00000611917 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
FAM228B-207ENST00000611917 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
FAM228B-207ENST00000611917 NGDNQ8NEJ9 315 aaKnown RBP17.82■□□□□ 0.44
FAM228B-207ENST00000611917 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
FAM228B-207ENST00000611917 CDK19Q9BWU1 502 aa17.82■□□□□ 0.44
FAM228B-207ENST00000611917 CDC42BPGQ6DT37 1551 aa17.82■□□□□ 0.44
FAM228B-207ENST00000611917 LMOD2Q6P5Q4 547 aa17.81■□□□□ 0.44
FAM228B-207ENST00000611917 ADGRB1O14514 1584 aa17.8■□□□□ 0.44
FAM228B-207ENST00000611917 RXRBP28702 533 aa17.8■□□□□ 0.44
FAM228B-207ENST00000611917 NUDT16Q96DE0 195 aaKnown RBP17.8■□□□□ 0.44
FAM228B-207ENST00000611917 QTRT2Q9H974 415 aaKnown RBP17.8■□□□□ 0.44
FAM228B-207ENST00000611917 SPATA31A3Q5VYP0 1347 aa17.79■□□□□ 0.44
FAM228B-207ENST00000611917 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
FAM228B-207ENST00000611917 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
FAM228B-207ENST00000611917 AFF2P51816 1311 aa17.78■□□□□ 0.44
FAM228B-207ENST00000611917 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
FAM228B-207ENST00000611917 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
FAM228B-207ENST00000611917 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
FAM228B-207ENST00000611917 CENPJQ9HC77 1338 aaPredicted RBP17.77■□□□□ 0.44
FAM228B-207ENST00000611917 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
FAM228B-207ENST00000611917 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
FAM228B-207ENST00000611917 SRPK2P78362 688 aaKnown RBP17.75■□□□□ 0.43
FAM228B-207ENST00000611917 USP21Q9UK80 565 aa17.75■□□□□ 0.43
FAM228B-207ENST00000611917 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
FAM228B-207ENST00000611917 LRP6O75581 1613 aa17.74■□□□□ 0.43
FAM228B-207ENST00000611917 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
FAM228B-207ENST00000611917 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
FAM228B-207ENST00000611917 RBM6P78332 1123 aaKnown RBP17.73■□□□□ 0.43
FAM228B-207ENST00000611917 FNBP4Q8N3X1 1017 aaPredicted RBP17.73■□□□□ 0.43
FAM228B-207ENST00000611917 ROCK2O75116 1388 aaKnown RBP17.73■□□□□ 0.43
FAM228B-207ENST00000611917 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
FAM228B-207ENST00000611917 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
FAM228B-207ENST00000611917 NBPF8Q3BBV2 869 aa17.72■□□□□ 0.43
FAM228B-207ENST00000611917 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
FAM228B-207ENST00000611917 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
FAM228B-207ENST00000611917 PXDNQ92626 1479 aa17.71■□□□□ 0.43
FAM228B-207ENST00000611917 ARHGEF10O15013 1369 aa17.71■□□□□ 0.43
FAM228B-207ENST00000611917 CARD11Q9BXL7 1154 aa17.71■□□□□ 0.43
FAM228B-207ENST00000611917 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
FAM228B-207ENST00000611917 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
FAM228B-207ENST00000611917 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
FAM228B-207ENST00000611917 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
FAM228B-207ENST00000611917 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
FAM228B-207ENST00000611917 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
FAM228B-207ENST00000611917 CABLES1Q8TDN4 633 aa17.68■□□□□ 0.42
FAM228B-207ENST00000611917 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
FAM228B-207ENST00000611917 ACEP12821 1306 aa17.67■□□□□ 0.42
FAM228B-207ENST00000611917 KIF1AQ12756 1690 aa17.66■□□□□ 0.42
FAM228B-207ENST00000611917 TULP4Q9NRJ4 1543 aa17.66■□□□□ 0.42
FAM228B-207ENST00000611917 TNS3Q68CZ2 1445 aa17.65■□□□□ 0.42
FAM228B-207ENST00000611917 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
FAM228B-207ENST00000611917 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
FAM228B-207ENST00000611917 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
FAM228B-207ENST00000611917 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
FAM228B-207ENST00000611917 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
FAM228B-207ENST00000611917 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
FAM228B-207ENST00000611917 FAM83GA6ND36 823 aa17.61■□□□□ 0.41
FAM228B-207ENST00000611917 NLRP13Q86W25 1043 aa17.61■□□□□ 0.41
FAM228B-207ENST00000611917 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
FAM228B-207ENST00000611917 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
FAM228B-207ENST00000611917 BRD4O60885 1362 aaPredicted RBP17.59■□□□□ 0.41
FAM228B-207ENST00000611917 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
FAM228B-207ENST00000611917 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
FAM228B-207ENST00000611917 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms