RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
SNX20-205ENST00000610485 LRP6O75581 1613 aa18.89■□□□□ 0.62
SNX20-205ENST00000610485 WAPLQ7Z5K2 1190 aa18.89■□□□□ 0.61
SNX20-205ENST00000610485 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
SNX20-205ENST00000610485 DDX17Q92841 729 aaKnown RBP18.87■□□□□ 0.61
SNX20-205ENST00000610485 STAC3Q96MF2 364 aa18.87■□□□□ 0.61
SNX20-205ENST00000610485 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
SNX20-205ENST00000610485 ADGRB1O14514 1584 aa18.86■□□□□ 0.61
SNX20-205ENST00000610485 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
SNX20-205ENST00000610485 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
SNX20-205ENST00000610485 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
SNX20-205ENST00000610485 PNPLA6Q8IY17 1366 aa18.83■□□□□ 0.61
SNX20-205ENST00000610485 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.61
SNX20-205ENST00000610485 POTEAQ6S8J7 498 aa18.82■□□□□ 0.6
SNX20-205ENST00000610485 KDM2AQ9Y2K7 1162 aa18.82■□□□□ 0.6
SNX20-205ENST00000610485 FMN2Q9NZ56 1722 aa18.81■□□□□ 0.6
SNX20-205ENST00000610485 ESCO1Q5FWF5 840 aa18.8■□□□□ 0.6
SNX20-205ENST00000610485 PRAM1Q96QH2 718 aa18.8■□□□□ 0.6
SNX20-205ENST00000610485 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
SNX20-205ENST00000610485 NPHP3Q7Z494 1330 aa18.78■□□□□ 0.6
SNX20-205ENST00000610485 PXDNQ92626 1479 aa18.77■□□□□ 0.6
SNX20-205ENST00000610485 NUTM2FA1L443 756 aa18.77■□□□□ 0.6
SNX20-205ENST00000610485 NUTM2BA6NNL0 878 aaPredicted RBP18.77■□□□□ 0.6
SNX20-205ENST00000610485 NUTM2EB1AL46 878 aaPredicted RBP18.77■□□□□ 0.6
SNX20-205ENST00000610485 NUTM2AQ8IVF1 878 aaPredicted RBP18.77■□□□□ 0.6
SNX20-205ENST00000610485 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
SNX20-205ENST00000610485 POGKQ9P215 609 aa18.75■□□□□ 0.59
SNX20-205ENST00000610485 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
SNX20-205ENST00000610485 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
SNX20-205ENST00000610485 FOXO3O43524 673 aa18.74■□□□□ 0.59
SNX20-205ENST00000610485 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX20-205ENST00000610485 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
SNX20-205ENST00000610485 COL22A1Q8NFW1 1626 aaPredicted RBP18.74■□□□□ 0.59
SNX20-205ENST00000610485 ANKARQ7Z5J8 1434 aa18.72■□□□□ 0.59
SNX20-205ENST00000610485 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
SNX20-205ENST00000610485 AFF2P51816 1311 aa18.7■□□□□ 0.58
SNX20-205ENST00000610485 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
SNX20-205ENST00000610485 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
SNX20-205ENST00000610485 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
SNX20-205ENST00000610485 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
SNX20-205ENST00000610485 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
SNX20-205ENST00000610485 MINK1Q8N4C8 1332 aaPredicted RBP18.68■□□□□ 0.58
SNX20-205ENST00000610485 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
SNX20-205ENST00000610485 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
SNX20-205ENST00000610485 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
SNX20-205ENST00000610485 ADAMTS2O95450 1211 aa18.66■□□□□ 0.58
SNX20-205ENST00000610485 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
SNX20-205ENST00000610485 WASLO00401 505 aaPredicted RBP18.65■□□□□ 0.58
SNX20-205ENST00000610485 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
SNX20-205ENST00000610485 RGPD8O14715 1765 aaPredicted RBP18.65■□□□□ 0.58
SNX20-205ENST00000610485 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
SNX20-205ENST00000610485 PRR36Q9H6K5 1346 aa18.64■□□□□ 0.57
SNX20-205ENST00000610485 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
SNX20-205ENST00000610485 L3MBTL2Q969R5 705 aa18.63■□□□□ 0.57
SNX20-205ENST00000610485 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
SNX20-205ENST00000610485 TNS3Q68CZ2 1445 aa18.63■□□□□ 0.57
SNX20-205ENST00000610485 CDK12Q9NYV4 1490 aaPredicted RBP18.63■□□□□ 0.57
SNX20-205ENST00000610485 RXRBP28702 533 aa18.62■□□□□ 0.57
SNX20-205ENST00000610485 PSME1Q06323 249 aa18.62■□□□□ 0.57
SNX20-205ENST00000610485 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
SNX20-205ENST00000610485 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
SNX20-205ENST00000610485 PMFBP1Q8TBY8 1022 aa18.6■□□□□ 0.57
SNX20-205ENST00000610485 ATP7BP35670 1465 aa18.59■□□□□ 0.57
SNX20-205ENST00000610485 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
SNX20-205ENST00000610485 QTRT2Q9H974 415 aaKnown RBP18.58■□□□□ 0.56
SNX20-205ENST00000610485 ARHGEF10O15013 1369 aa18.57■□□□□ 0.56
SNX20-205ENST00000610485 RBM6P78332 1123 aaKnown RBP18.57■□□□□ 0.56
SNX20-205ENST00000610485 NEUROD1Q13562 356 aa18.57■□□□□ 0.56
SNX20-205ENST00000610485 USP21Q9UK80 565 aa18.57■□□□□ 0.56
SNX20-205ENST00000610485 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
SNX20-205ENST00000610485 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
SNX20-205ENST00000610485 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
SNX20-205ENST00000610485 GPRASP1Q5JY77 1395 aa18.55■□□□□ 0.56
SNX20-205ENST00000610485 BCL9LQ86UU0 1499 aa18.55■□□□□ 0.56
SNX20-205ENST00000610485 NUDT16Q96DE0 195 aaKnown RBP18.55■□□□□ 0.56
SNX20-205ENST00000610485 RGS12O14924 1447 aa18.55■□□□□ 0.56
SNX20-205ENST00000610485 ATRNO75882 1429 aa18.55■□□□□ 0.56
SNX20-205ENST00000610485 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
SNX20-205ENST00000610485 CDK19Q9BWU1 502 aa18.54■□□□□ 0.56
SNX20-205ENST00000610485 TRPC5Q9UL62 973 aaPredicted RBP18.54■□□□□ 0.56
SNX20-205ENST00000610485 ITSN1Q15811 1721 aa18.54■□□□□ 0.56
SNX20-205ENST00000610485 TOPAZ1Q8N9V7 1692 aa18.53■□□□□ 0.56
SNX20-205ENST00000610485 SLIT2O94813 1529 aa18.53■□□□□ 0.56
SNX20-205ENST00000610485 ABCA3Q99758 1704 aa18.52■□□□□ 0.56
SNX20-205ENST00000610485 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
SNX20-205ENST00000610485 ALS2Q96Q42 1657 aa18.52■□□□□ 0.56
SNX20-205ENST00000610485 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
SNX20-205ENST00000610485 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
SNX20-205ENST00000610485 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
SNX20-205ENST00000610485 POLR3AO14802 1390 aaPredicted RBP18.5■□□□□ 0.55
SNX20-205ENST00000610485 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
SNX20-205ENST00000610485 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
SNX20-205ENST00000610485 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
SNX20-205ENST00000610485 QRICH2Q9H0J4 1663 aa18.49■□□□□ 0.55
SNX20-205ENST00000610485 PLEKHG3A1L390 1219 aa18.48■□□□□ 0.55
SNX20-205ENST00000610485 NBPF8Q3BBV2 869 aa18.47■□□□□ 0.55
SNX20-205ENST00000610485 UNC5CLQ8IV45 518 aa18.47■□□□□ 0.55
SNX20-205ENST00000610485 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX20-205ENST00000610485 ACEP12821 1306 aa18.46■□□□□ 0.55
SNX20-205ENST00000610485 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms