RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ADGRB1O14514 1584 aa15.17■□□□□ 0.02
LINC01001-203ENST00000607448 C1orf167Q5SNV9 1468 aa15.17■□□□□ 0.02
LINC01001-203ENST00000607448 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
LINC01001-203ENST00000607448 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
LINC01001-203ENST00000607448 DDX17Q92841 729 aaKnown RBP15.16■□□□□ 0.02
LINC01001-203ENST00000607448 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
LINC01001-203ENST00000607448 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
LINC01001-203ENST00000607448 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
LINC01001-203ENST00000607448 LRP6O75581 1613 aa15.15■□□□□ 0.02
LINC01001-203ENST00000607448 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
LINC01001-203ENST00000607448 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
LINC01001-203ENST00000607448 JCADQ9P266 1359 aa15.14■□□□□ 0.01
LINC01001-203ENST00000607448 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
LINC01001-203ENST00000607448 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
LINC01001-203ENST00000607448 RGS17Q9UGC6 210 aaPredicted RBP15.13■□□□□ 0.01
LINC01001-203ENST00000607448 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
LINC01001-203ENST00000607448 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
LINC01001-203ENST00000607448 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
LINC01001-203ENST00000607448 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
LINC01001-203ENST00000607448 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
LINC01001-203ENST00000607448 KIAA1210Q9ULL0 1709 aa15.08■□□□□ 0
LINC01001-203ENST00000607448 SAFB2Q14151 953 aaKnown RBP eCLIP15.07■□□□□ 0
LINC01001-203ENST00000607448 ADGRB2O60241 1585 aa15.07■□□□□ 0
LINC01001-203ENST00000607448 PRAM1Q96QH2 718 aa15.07■□□□□ 0
LINC01001-203ENST00000607448 KIF1AQ12756 1690 aa15.05■□□□□ 0
LINC01001-203ENST00000607448 PXDNQ92626 1479 aa15.05■□□□□ 0
LINC01001-203ENST00000607448 SPATA31A6Q5VVP1 1343 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 SOCS7O14512 581 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 ESCO1Q5FWF5 840 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 SIRT1Q96EB6 747 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
LINC01001-203ENST00000607448 PNPLA6Q8IY17 1366 aa15.04■□□□□ -0
LINC01001-203ENST00000607448 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
LINC01001-203ENST00000607448 SOS2Q07890 1332 aaPredicted RBP15.03■□□□□ -0
LINC01001-203ENST00000607448 POTEAQ6S8J7 498 aa15.03■□□□□ -0
LINC01001-203ENST00000607448 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
LINC01001-203ENST00000607448 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
LINC01001-203ENST00000607448 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
LINC01001-203ENST00000607448 LRRC59Q96AG4 307 aaKnown RBP15.02■□□□□ -0
LINC01001-203ENST00000607448 XPCQ01831 940 aaPredicted RBP15.02□□□□□ -0.01
LINC01001-203ENST00000607448 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
LINC01001-203ENST00000607448 FOXO3O43524 673 aa15.01□□□□□ -0.01
LINC01001-203ENST00000607448 STAC3Q96MF2 364 aa15.01□□□□□ -0.01
LINC01001-203ENST00000607448 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
LINC01001-203ENST00000607448 MARF1Q9Y4F3 1742 aaKnown RBP15.01□□□□□ -0.01
LINC01001-203ENST00000607448 POGKQ9P215 609 aa15□□□□□ -0.01
LINC01001-203ENST00000607448 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
LINC01001-203ENST00000607448 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
LINC01001-203ENST00000607448 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
LINC01001-203ENST00000607448 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
LINC01001-203ENST00000607448 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
LINC01001-203ENST00000607448 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
LINC01001-203ENST00000607448 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
LINC01001-203ENST00000607448 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
LINC01001-203ENST00000607448 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
LINC01001-203ENST00000607448 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
LINC01001-203ENST00000607448 ITSN1Q15811 1721 aa14.96□□□□□ -0.01
LINC01001-203ENST00000607448 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.01
LINC01001-203ENST00000607448 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.02
LINC01001-203ENST00000607448 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.02
LINC01001-203ENST00000607448 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
LINC01001-203ENST00000607448 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
LINC01001-203ENST00000607448 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
LINC01001-203ENST00000607448 ATP7BP35670 1465 aa14.93□□□□□ -0.02
LINC01001-203ENST00000607448 ALS2Q96Q42 1657 aa14.93□□□□□ -0.02
LINC01001-203ENST00000607448 ADAMTS2O95450 1211 aa14.93□□□□□ -0.02
LINC01001-203ENST00000607448 C8orf37Q96NL8 207 aa14.93□□□□□ -0.02
LINC01001-203ENST00000607448 AFF2P51816 1311 aa14.93□□□□□ -0.02
LINC01001-203ENST00000607448 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
LINC01001-203ENST00000607448 KRT28Q7Z3Y7 464 aa14.91□□□□□ -0.02
LINC01001-203ENST00000607448 SPATA31A3Q5VYP0 1347 aa14.91□□□□□ -0.02
LINC01001-203ENST00000607448 CRYBG1Q9Y4K1 1723 aa14.9□□□□□ -0.02
LINC01001-203ENST00000607448 MIER1Q8N108 512 aa14.9□□□□□ -0.02
LINC01001-203ENST00000607448 TNS3Q68CZ2 1445 aa14.9□□□□□ -0.02
LINC01001-203ENST00000607448 ZNF772Q68DY9 489 aaPredicted RBP14.9□□□□□ -0.02
LINC01001-203ENST00000607448 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
LINC01001-203ENST00000607448 PLCH1Q4KWH8 1693 aa14.88□□□□□ -0.03
LINC01001-203ENST00000607448 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
LINC01001-203ENST00000607448 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
LINC01001-203ENST00000607448 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
LINC01001-203ENST00000607448 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
LINC01001-203ENST00000607448 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.86□□□□□ -0.03
LINC01001-203ENST00000607448 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
LINC01001-203ENST00000607448 CENPJQ9HC77 1338 aaPredicted RBP14.86□□□□□ -0.03
LINC01001-203ENST00000607448 PSME1Q06323 249 aa14.85□□□□□ -0.03
LINC01001-203ENST00000607448 CABLES1Q8TDN4 633 aa14.85□□□□□ -0.03
LINC01001-203ENST00000607448 NUDT16Q96DE0 195 aaKnown RBP14.85□□□□□ -0.03
LINC01001-203ENST00000607448 NGLY1Q96IV0 654 aa14.85□□□□□ -0.03
LINC01001-203ENST00000607448 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
LINC01001-203ENST00000607448 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
LINC01001-203ENST00000607448 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
LINC01001-203ENST00000607448 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
LINC01001-203ENST00000607448 RXRBP28702 533 aa14.83□□□□□ -0.04
LINC01001-203ENST00000607448 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
LINC01001-203ENST00000607448 QTRT2Q9H974 415 aaKnown RBP14.83□□□□□ -0.04
LINC01001-203ENST00000607448 RGS12O14924 1447 aa14.83□□□□□ -0.04
LINC01001-203ENST00000607448 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
LINC01001-203ENST00000607448 FNBP4Q8N3X1 1017 aaPredicted RBP14.82□□□□□ -0.04
LINC01001-203ENST00000607448 USP21Q9UK80 565 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms