RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 ASXL1Q8IXJ9 1541 aa14.59□□□□□ -0.07
CTSA-215ENST00000607187 ADGRL3Q9HAR2 1447 aa14.58□□□□□ -0.07
CTSA-215ENST00000607187 KNDC1Q76NI1 1749 aa14.58□□□□□ -0.07
CTSA-215ENST00000607187 C14orf93Q9H972 538 aaKnown RBP14.58□□□□□ -0.08
CTSA-215ENST00000607187 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
CTSA-215ENST00000607187 TECPR2O15040 1411 aa14.57□□□□□ -0.08
CTSA-215ENST00000607187 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
CTSA-215ENST00000607187 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
CTSA-215ENST00000607187 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
CTSA-215ENST00000607187 DCAF11Q8TEB1 546 aa14.55□□□□□ -0.08
CTSA-215ENST00000607187 STAC3Q96MF2 364 aa14.55□□□□□ -0.08
CTSA-215ENST00000607187 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
CTSA-215ENST00000607187 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
CTSA-215ENST00000607187 MST1RQ04912 1400 aa14.55□□□□□ -0.08
CTSA-215ENST00000607187 HAP1P54257 671 aaPredicted RBP14.54□□□□□ -0.08
CTSA-215ENST00000607187 CFAP70Q5T0N1 1121 aa14.54□□□□□ -0.08
CTSA-215ENST00000607187 STK26Q9P289 416 aa14.54□□□□□ -0.08
CTSA-215ENST00000607187 YTHDC2Q9H6S0 1430 aaKnown RBP14.54□□□□□ -0.08
CTSA-215ENST00000607187 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
CTSA-215ENST00000607187 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
CTSA-215ENST00000607187 KDM2AQ9Y2K7 1162 aa14.53□□□□□ -0.08
CTSA-215ENST00000607187 AHDC1Q5TGY3 1603 aaPredicted RBP14.52□□□□□ -0.08
CTSA-215ENST00000607187 MED1Q15648 1581 aaPredicted RBP14.52□□□□□ -0.08
CTSA-215ENST00000607187 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
CTSA-215ENST00000607187 BRINP3Q76B58 766 aa14.51□□□□□ -0.09
CTSA-215ENST00000607187 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
CTSA-215ENST00000607187 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
CTSA-215ENST00000607187 WAPLQ7Z5K2 1190 aa14.5□□□□□ -0.09
CTSA-215ENST00000607187 NHSL1Q5SYE7 1610 aa14.5□□□□□ -0.09
CTSA-215ENST00000607187 CDC42BPGQ6DT37 1551 aa14.5□□□□□ -0.09
CTSA-215ENST00000607187 PROM2Q8N271 834 aa14.49□□□□□ -0.09
CTSA-215ENST00000607187 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
CTSA-215ENST00000607187 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
CTSA-215ENST00000607187 DLC1Q96QB1 1528 aa14.47□□□□□ -0.09
CTSA-215ENST00000607187 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
CTSA-215ENST00000607187 JCADQ9P266 1359 aa14.46□□□□□ -0.1
CTSA-215ENST00000607187 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
CTSA-215ENST00000607187 SIN3AQ96ST3 1273 aa14.45□□□□□ -0.1
CTSA-215ENST00000607187 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
CTSA-215ENST00000607187 SHPRHQ149N8 1683 aa14.45□□□□□ -0.1
CTSA-215ENST00000607187 PRAM1Q96QH2 718 aa14.44□□□□□ -0.1
CTSA-215ENST00000607187 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
CTSA-215ENST00000607187 ORAI2Q96SN7 254 aa14.43□□□□□ -0.1
CTSA-215ENST00000607187 ARHGEF28Q8N1W1 1705 aaKnown RBP14.42□□□□□ -0.1
CTSA-215ENST00000607187 IFNLR1Q8IU57 520 aaPredicted RBP14.42□□□□□ -0.1
CTSA-215ENST00000607187 L3MBTL2Q969R5 705 aa14.42□□□□□ -0.1
CTSA-215ENST00000607187 TRAK1Q9UPV9 953 aa14.42□□□□□ -0.1
CTSA-215ENST00000607187 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
CTSA-215ENST00000607187 DDX17Q92841 729 aaKnown RBP14.41□□□□□ -0.1
CTSA-215ENST00000607187 POGKQ9P215 609 aa14.41□□□□□ -0.1
CTSA-215ENST00000607187 ADGRB2O60241 1585 aa14.41□□□□□ -0.1
CTSA-215ENST00000607187 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
CTSA-215ENST00000607187 SAFB2Q14151 953 aaKnown RBP eCLIP14.4□□□□□ -0.1
CTSA-215ENST00000607187 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.1
CTSA-215ENST00000607187 LRRC59Q96AG4 307 aaKnown RBP14.39□□□□□ -0.11
CTSA-215ENST00000607187 SOS2Q07890 1332 aaPredicted RBP14.39□□□□□ -0.11
CTSA-215ENST00000607187 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
CTSA-215ENST00000607187 NUTM2FA1L443 756 aa14.38□□□□□ -0.11
CTSA-215ENST00000607187 KIF1AQ12756 1690 aa14.37□□□□□ -0.11
CTSA-215ENST00000607187 NBPF1Q3BBV0 1214 aa14.37□□□□□ -0.11
CTSA-215ENST00000607187 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
CTSA-215ENST00000607187 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
CTSA-215ENST00000607187 LRP6O75581 1613 aa14.36□□□□□ -0.11
CTSA-215ENST00000607187 USP32Q8NFA0 1604 aa14.36□□□□□ -0.11
CTSA-215ENST00000607187 NPHP3Q7Z494 1330 aa14.36□□□□□ -0.11
CTSA-215ENST00000607187 FOXO3O43524 673 aa14.35□□□□□ -0.11
CTSA-215ENST00000607187 PXDNQ92626 1479 aa14.35□□□□□ -0.11
CTSA-215ENST00000607187 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
CTSA-215ENST00000607187 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
CTSA-215ENST00000607187 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
CTSA-215ENST00000607187 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
CTSA-215ENST00000607187 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
CTSA-215ENST00000607187 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
CTSA-215ENST00000607187 VSIG10Q8N0Z9 540 aa14.32□□□□□ -0.12
CTSA-215ENST00000607187 COL22A1Q8NFW1 1626 aaPredicted RBP14.32□□□□□ -0.12
CTSA-215ENST00000607187 EIF3AQ14152 1382 aaKnown RBP14.32□□□□□ -0.12
CTSA-215ENST00000607187 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
CTSA-215ENST00000607187 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
CTSA-215ENST00000607187 NUTM2BA6NNL0 878 aaPredicted RBP14.3□□□□□ -0.12
CTSA-215ENST00000607187 NUTM2EB1AL46 878 aaPredicted RBP14.3□□□□□ -0.12
CTSA-215ENST00000607187 XPCQ01831 940 aaPredicted RBP14.3□□□□□ -0.12
CTSA-215ENST00000607187 NUTM2AQ8IVF1 878 aaPredicted RBP14.3□□□□□ -0.12
CTSA-215ENST00000607187 PRR36Q9H6K5 1346 aa14.3□□□□□ -0.12
CTSA-215ENST00000607187 QRICH2Q9H0J4 1663 aa14.3□□□□□ -0.12
CTSA-215ENST00000607187 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
CTSA-215ENST00000607187 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
CTSA-215ENST00000607187 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
CTSA-215ENST00000607187 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
CTSA-215ENST00000607187 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
CTSA-215ENST00000607187 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
CTSA-215ENST00000607187 ATP7BP35670 1465 aa14.27□□□□□ -0.12
CTSA-215ENST00000607187 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.12
CTSA-215ENST00000607187 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
CTSA-215ENST00000607187 CDK19Q9BWU1 502 aa14.27□□□□□ -0.13
CTSA-215ENST00000607187 GPRASP1Q5JY77 1395 aa14.26□□□□□ -0.13
CTSA-215ENST00000607187 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
CTSA-215ENST00000607187 SOCS7O14512 581 aa14.26□□□□□ -0.13
CTSA-215ENST00000607187 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
CTSA-215ENST00000607187 PMFBP1Q8TBY8 1022 aa14.26□□□□□ -0.13
CTSA-215ENST00000607187 TAOK2Q9UL54 1235 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms