RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 ARHGEF28Q8N1W1 1705 aaKnown RBP23.38■■□□□ 1.33
SFXN2-208ENST00000602660 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
SFXN2-208ENST00000602660 DLC1Q96QB1 1528 aa23.37■■□□□ 1.33
SFXN2-208ENST00000602660 DCAF11Q8TEB1 546 aa23.36■■□□□ 1.33
SFXN2-208ENST00000602660 JCADQ9P266 1359 aa23.35■■□□□ 1.33
SFXN2-208ENST00000602660 KDM2AQ9Y2K7 1162 aa23.34■■□□□ 1.33
SFXN2-208ENST00000602660 SIRT1Q96EB6 747 aa23.32■■□□□ 1.32
SFXN2-208ENST00000602660 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
SFXN2-208ENST00000602660 LRP6O75581 1613 aa23.31■■□□□ 1.32
SFXN2-208ENST00000602660 STAC3Q96MF2 364 aa23.31■■□□□ 1.32
SFXN2-208ENST00000602660 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
SFXN2-208ENST00000602660 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
SFXN2-208ENST00000602660 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
SFXN2-208ENST00000602660 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
SFXN2-208ENST00000602660 RGS17Q9UGC6 210 aaPredicted RBP23.27■■□□□ 1.32
SFXN2-208ENST00000602660 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
SFXN2-208ENST00000602660 COL22A1Q8NFW1 1626 aaPredicted RBP23.23■■□□□ 1.31
SFXN2-208ENST00000602660 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
SFXN2-208ENST00000602660 PXDNQ92626 1479 aa23.23■■□□□ 1.31
SFXN2-208ENST00000602660 TRPM1Q7Z4N2 1603 aa23.22■■□□□ 1.31
SFXN2-208ENST00000602660 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
SFXN2-208ENST00000602660 SOS2Q07890 1332 aaPredicted RBP23.22■■□□□ 1.31
SFXN2-208ENST00000602660 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
SFXN2-208ENST00000602660 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
SFXN2-208ENST00000602660 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
SFXN2-208ENST00000602660 PNPLA6Q8IY17 1366 aa23.21■■□□□ 1.31
SFXN2-208ENST00000602660 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
SFXN2-208ENST00000602660 NUTM2FA1L443 756 aa23.19■■□□□ 1.3
SFXN2-208ENST00000602660 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
SFXN2-208ENST00000602660 ESCO1Q5FWF5 840 aa23.18■■□□□ 1.3
SFXN2-208ENST00000602660 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
SFXN2-208ENST00000602660 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
SFXN2-208ENST00000602660 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
SFXN2-208ENST00000602660 POGKQ9P215 609 aa23.15■■□□□ 1.3
SFXN2-208ENST00000602660 QRICH2Q9H0J4 1663 aa23.14■■□□□ 1.29
SFXN2-208ENST00000602660 SOCS7O14512 581 aa23.14■■□□□ 1.29
SFXN2-208ENST00000602660 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
SFXN2-208ENST00000602660 NPHP3Q7Z494 1330 aa23.13■■□□□ 1.29
SFXN2-208ENST00000602660 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
SFXN2-208ENST00000602660 TULP4Q9NRJ4 1543 aa23.13■■□□□ 1.29
SFXN2-208ENST00000602660 POTEAQ6S8J7 498 aa23.12■■□□□ 1.29
SFXN2-208ENST00000602660 ANKARQ7Z5J8 1434 aa23.12■■□□□ 1.29
SFXN2-208ENST00000602660 ABCA3Q99758 1704 aa23.12■■□□□ 1.29
SFXN2-208ENST00000602660 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
SFXN2-208ENST00000602660 FOXO3O43524 673 aa23.11■■□□□ 1.29
SFXN2-208ENST00000602660 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
SFXN2-208ENST00000602660 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
SFXN2-208ENST00000602660 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
SFXN2-208ENST00000602660 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
SFXN2-208ENST00000602660 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
SFXN2-208ENST00000602660 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
SFXN2-208ENST00000602660 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
SFXN2-208ENST00000602660 ALS2Q96Q42 1657 aa23.08■■□□□ 1.29
SFXN2-208ENST00000602660 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.28
SFXN2-208ENST00000602660 ATP7BP35670 1465 aa23.06■■□□□ 1.28
SFXN2-208ENST00000602660 PHF8Q9UPP1 1060 aa23.06■■□□□ 1.28
SFXN2-208ENST00000602660 WASLO00401 505 aaPredicted RBP23.04■■□□□ 1.28
SFXN2-208ENST00000602660 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
SFXN2-208ENST00000602660 CRYBG1Q9Y4K1 1723 aa23.04■■□□□ 1.28
SFXN2-208ENST00000602660 EIF3AQ14152 1382 aaKnown RBP23.02■■□□□ 1.28
SFXN2-208ENST00000602660 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
SFXN2-208ENST00000602660 KRT28Q7Z3Y7 464 aa23■■□□□ 1.27
SFXN2-208ENST00000602660 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
SFXN2-208ENST00000602660 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
SFXN2-208ENST00000602660 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
SFXN2-208ENST00000602660 AFF2P51816 1311 aa22.99■■□□□ 1.27
SFXN2-208ENST00000602660 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
SFXN2-208ENST00000602660 SBNO1A3KN83 1393 aa22.97■■□□□ 1.27
SFXN2-208ENST00000602660 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
SFXN2-208ENST00000602660 ZNF772Q68DY9 489 aaPredicted RBP22.96■■□□□ 1.27
SFXN2-208ENST00000602660 C8orf37Q96NL8 207 aa22.96■■□□□ 1.27
SFXN2-208ENST00000602660 GPRASP1Q5JY77 1395 aa22.96■■□□□ 1.27
SFXN2-208ENST00000602660 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
SFXN2-208ENST00000602660 CENPJQ9HC77 1338 aaPredicted RBP22.95■■□□□ 1.26
SFXN2-208ENST00000602660 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
SFXN2-208ENST00000602660 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
SFXN2-208ENST00000602660 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
SFXN2-208ENST00000602660 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
SFXN2-208ENST00000602660 NWD2Q9ULI1 1742 aa22.92■■□□□ 1.26
SFXN2-208ENST00000602660 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
SFXN2-208ENST00000602660 PSME1Q06323 249 aa22.91■■□□□ 1.26
SFXN2-208ENST00000602660 AKAP12Q02952 1782 aa22.91■■□□□ 1.26
SFXN2-208ENST00000602660 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
SFXN2-208ENST00000602660 NGLY1Q96IV0 654 aa22.89■■□□□ 1.25
SFXN2-208ENST00000602660 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
SFXN2-208ENST00000602660 ARHGEF10O15013 1369 aa22.89■■□□□ 1.25
SFXN2-208ENST00000602660 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
SFXN2-208ENST00000602660 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
SFXN2-208ENST00000602660 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
SFXN2-208ENST00000602660 BCL9LQ86UU0 1499 aa22.87■■□□□ 1.25
SFXN2-208ENST00000602660 SLIT2O94813 1529 aa22.86■■□□□ 1.25
SFXN2-208ENST00000602660 ATRNO75882 1429 aa22.85■■□□□ 1.25
SFXN2-208ENST00000602660 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
SFXN2-208ENST00000602660 CABLES1Q8TDN4 633 aa22.85■■□□□ 1.25
SFXN2-208ENST00000602660 CCDC61Q9Y6R9 512 aa22.85■■□□□ 1.25
SFXN2-208ENST00000602660 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
SFXN2-208ENST00000602660 BRWD3Q6RI45 1802 aa22.83■■□□□ 1.25
SFXN2-208ENST00000602660 RXRBP28702 533 aa22.83■■□□□ 1.25
SFXN2-208ENST00000602660 QTRT2Q9H974 415 aaKnown RBP22.83■■□□□ 1.25
SFXN2-208ENST00000602660 CABP2Q9NPB3 220 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms