RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
FARP1-235ENST00000601656 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
FARP1-235ENST00000601656 PZPP20742 1482 aa14.42□□□□□ -0.1
FARP1-235ENST00000601656 WASHC2CQ9Y4E1 1318 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 KIF3BO15066 747 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
FARP1-235ENST00000601656 CCDC18Q5T9S5 1454 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 PLEKHH2Q8IVE3 1493 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
FARP1-235ENST00000601656 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
FARP1-235ENST00000601656 DHX29Q7Z478 1369 aaKnown RBP14.39□□□□□ -0.11
FARP1-235ENST00000601656 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
FARP1-235ENST00000601656 PDAP1Q13442 181 aaKnown RBP14.39□□□□□ -0.11
FARP1-235ENST00000601656 TRPC6Q9Y210 931 aa14.39□□□□□ -0.11
FARP1-235ENST00000601656 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
FARP1-235ENST00000601656 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
FARP1-235ENST00000601656 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
FARP1-235ENST00000601656 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
FARP1-235ENST00000601656 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
FARP1-235ENST00000601656 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
FARP1-235ENST00000601656 APBB1O00213 710 aa14.36□□□□□ -0.11
FARP1-235ENST00000601656 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
FARP1-235ENST00000601656 KDM5DQ9BY66 1539 aa14.36□□□□□ -0.11
FARP1-235ENST00000601656 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
FARP1-235ENST00000601656 ZC3H13Q5T200 1668 aaKnown RBP14.35□□□□□ -0.11
FARP1-235ENST00000601656 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
FARP1-235ENST00000601656 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
FARP1-235ENST00000601656 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
FARP1-235ENST00000601656 RTEL1-TNFRSF6BF6WH68 1400 aa14.33□□□□□ -0.11
FARP1-235ENST00000601656 PDE4DQ08499 809 aa14.33□□□□□ -0.12
FARP1-235ENST00000601656 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.12
FARP1-235ENST00000601656 TRIM66O15016 1216 aa14.32□□□□□ -0.12
FARP1-235ENST00000601656 PPP1R37O75864 691 aa14.32□□□□□ -0.12
FARP1-235ENST00000601656 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
FARP1-235ENST00000601656 CFAP65Q6ZU64 1925 aaKnown RBP14.32□□□□□ -0.12
FARP1-235ENST00000601656 LTKP29376 864 aa14.31□□□□□ -0.12
FARP1-235ENST00000601656 FLIIQ13045 1269 aa14.31□□□□□ -0.12
FARP1-235ENST00000601656 IER5LQ5T953 404 aa14.31□□□□□ -0.12
FARP1-235ENST00000601656 TXNDC2Q86VQ3 553 aa14.31□□□□□ -0.12
FARP1-235ENST00000601656 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
FARP1-235ENST00000601656 MBD5Q9P267 1494 aa14.29□□□□□ -0.12
FARP1-235ENST00000601656 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
FARP1-235ENST00000601656 SEC24BO95487 1268 aa14.28□□□□□ -0.12
FARP1-235ENST00000601656 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
FARP1-235ENST00000601656 SCAF11Q99590 1463 aaKnown RBP14.28□□□□□ -0.12
FARP1-235ENST00000601656 JCADQ9P266 1359 aa14.28□□□□□ -0.12
FARP1-235ENST00000601656 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
FARP1-235ENST00000601656 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
FARP1-235ENST00000601656 PROSER2Q86WR7 435 aaPredicted RBP14.27□□□□□ -0.13
FARP1-235ENST00000601656 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.13
FARP1-235ENST00000601656 TMEM106CQ9BVX2 250 aa14.27□□□□□ -0.13
FARP1-235ENST00000601656 PHLPP1O60346 1717 aa14.27□□□□□ -0.13
FARP1-235ENST00000601656 UBR1Q8IWV7 1749 aa14.27□□□□□ -0.13
FARP1-235ENST00000601656 RXRBP28702 533 aa14.26□□□□□ -0.13
FARP1-235ENST00000601656 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
FARP1-235ENST00000601656 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
FARP1-235ENST00000601656 MFSD10Q14728 455 aa14.25□□□□□ -0.13
FARP1-235ENST00000601656 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
FARP1-235ENST00000601656 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
FARP1-235ENST00000601656 PDE4AP27815 886 aa14.24□□□□□ -0.13
FARP1-235ENST00000601656 KCNA6P17658 529 aa14.23□□□□□ -0.13
FARP1-235ENST00000601656 NLRP6P59044 892 aa14.23□□□□□ -0.13
FARP1-235ENST00000601656 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
FARP1-235ENST00000601656 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
FARP1-235ENST00000601656 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
FARP1-235ENST00000601656 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
FARP1-235ENST00000601656 ZNF316A6NFI3 1004 aaPredicted RBP14.22□□□□□ -0.13
FARP1-235ENST00000601656 ERVK-7P63135 1459 aa14.22□□□□□ -0.13
FARP1-235ENST00000601656 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
FARP1-235ENST00000601656 LRRC9Q6ZRR7 1453 aa14.22□□□□□ -0.13
FARP1-235ENST00000601656 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
FARP1-235ENST00000601656 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
FARP1-235ENST00000601656 SLIT1O75093 1534 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 PSEN1P49768 467 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 FAM117AQ9C073 453 aa14.2□□□□□ -0.14
FARP1-235ENST00000601656 LRP6O75581 1613 aa14.19□□□□□ -0.14
FARP1-235ENST00000601656 ABCC3O15438 1527 aa14.19□□□□□ -0.14
FARP1-235ENST00000601656 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
FARP1-235ENST00000601656 MSH6P52701 1360 aa14.19□□□□□ -0.14
FARP1-235ENST00000601656 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
FARP1-235ENST00000601656 TIAM1Q13009 1591 aa14.18□□□□□ -0.14
FARP1-235ENST00000601656 CAMK2BQ13554 666 aa14.18□□□□□ -0.14
FARP1-235ENST00000601656 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
FARP1-235ENST00000601656 SLC26A8Q96RN1 970 aa14.18□□□□□ -0.14
FARP1-235ENST00000601656 TSPY4P0CV99 314 aa14.17□□□□□ -0.14
FARP1-235ENST00000601656 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
FARP1-235ENST00000601656 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
FARP1-235ENST00000601656 COL16A1Q07092 1604 aaPredicted RBP14.16□□□□□ -0.14
FARP1-235ENST00000601656 A6NJR5 290 aa14.16□□□□□ -0.14
FARP1-235ENST00000601656 SOX12O15370 315 aa14.16□□□□□ -0.14
FARP1-235ENST00000601656 COLQQ9Y215 455 aaPredicted RBP14.16□□□□□ -0.14
FARP1-235ENST00000601656 PRDM15P57071 1507 aaPredicted RBP14.15□□□□□ -0.14
FARP1-235ENST00000601656 CDK12Q9NYV4 1490 aaPredicted RBP14.15□□□□□ -0.14
FARP1-235ENST00000601656 MLLT3P42568 568 aaPredicted RBP14.15□□□□□ -0.14
FARP1-235ENST00000601656 DDX27Q96GQ7 796 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms