RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
TMEM143-211ENST00000600816 PRAM1Q96QH2 718 aa23.57■■□□□ 1.36
TMEM143-211ENST00000600816 RGS17Q9UGC6 210 aaPredicted RBP23.57■■□□□ 1.36
TMEM143-211ENST00000600816 LAMC1P11047 1609 aa23.57■■□□□ 1.36
TMEM143-211ENST00000600816 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
TMEM143-211ENST00000600816 KNDC1Q76NI1 1749 aa23.56■■□□□ 1.36
TMEM143-211ENST00000600816 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
TMEM143-211ENST00000600816 TRAK1Q9UPV9 953 aa23.55■■□□□ 1.36
TMEM143-211ENST00000600816 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
TMEM143-211ENST00000600816 SIN3AQ96ST3 1273 aa23.53■■□□□ 1.36
TMEM143-211ENST00000600816 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
TMEM143-211ENST00000600816 ESCO1Q5FWF5 840 aa23.52■■□□□ 1.36
TMEM143-211ENST00000600816 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
TMEM143-211ENST00000600816 LRP6O75581 1613 aa23.51■■□□□ 1.35
TMEM143-211ENST00000600816 POGKQ9P215 609 aa23.5■■□□□ 1.35
TMEM143-211ENST00000600816 SPATA31A6Q5VVP1 1343 aa23.5■■□□□ 1.35
TMEM143-211ENST00000600816 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
TMEM143-211ENST00000600816 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
TMEM143-211ENST00000600816 NUTM2BA6NNL0 878 aaPredicted RBP23.48■■□□□ 1.35
TMEM143-211ENST00000600816 NUTM2EB1AL46 878 aaPredicted RBP23.48■■□□□ 1.35
TMEM143-211ENST00000600816 NUTM2AQ8IVF1 878 aaPredicted RBP23.48■■□□□ 1.35
TMEM143-211ENST00000600816 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
TMEM143-211ENST00000600816 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
TMEM143-211ENST00000600816 SOCS7O14512 581 aa23.46■■□□□ 1.35
TMEM143-211ENST00000600816 FOXO3O43524 673 aa23.46■■□□□ 1.35
TMEM143-211ENST00000600816 XPCQ01831 940 aaPredicted RBP23.46■■□□□ 1.35
TMEM143-211ENST00000600816 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
TMEM143-211ENST00000600816 PNPLA6Q8IY17 1366 aa23.45■■□□□ 1.34
TMEM143-211ENST00000600816 POTEAQ6S8J7 498 aa23.45■■□□□ 1.34
TMEM143-211ENST00000600816 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
TMEM143-211ENST00000600816 SHPRHQ149N8 1683 aa23.44■■□□□ 1.34
TMEM143-211ENST00000600816 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
TMEM143-211ENST00000600816 MEX3CQ5U5Q3 659 aaKnown RBP23.44■■□□□ 1.34
TMEM143-211ENST00000600816 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
TMEM143-211ENST00000600816 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
TMEM143-211ENST00000600816 NPHP3Q7Z494 1330 aa23.41■■□□□ 1.34
TMEM143-211ENST00000600816 PXDNQ92626 1479 aa23.39■■□□□ 1.34
TMEM143-211ENST00000600816 PHF8Q9UPP1 1060 aa23.36■■□□□ 1.33
TMEM143-211ENST00000600816 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
TMEM143-211ENST00000600816 PRR36Q9H6K5 1346 aa23.34■■□□□ 1.33
TMEM143-211ENST00000600816 WASLO00401 505 aaPredicted RBP23.34■■□□□ 1.33
TMEM143-211ENST00000600816 ADAMTS2O95450 1211 aa23.34■■□□□ 1.33
TMEM143-211ENST00000600816 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
TMEM143-211ENST00000600816 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
TMEM143-211ENST00000600816 C8orf37Q96NL8 207 aa23.32■■□□□ 1.32
TMEM143-211ENST00000600816 ANKARQ7Z5J8 1434 aa23.32■■□□□ 1.32
TMEM143-211ENST00000600816 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
TMEM143-211ENST00000600816 KIAA1210Q9ULL0 1709 aa23.31■■□□□ 1.32
TMEM143-211ENST00000600816 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
TMEM143-211ENST00000600816 AFF2P51816 1311 aa23.3■■□□□ 1.32
TMEM143-211ENST00000600816 SPATA31A3Q5VYP0 1347 aa23.29■■□□□ 1.32
TMEM143-211ENST00000600816 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
TMEM143-211ENST00000600816 ZNF772Q68DY9 489 aaPredicted RBP23.28■■□□□ 1.32
TMEM143-211ENST00000600816 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
TMEM143-211ENST00000600816 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
TMEM143-211ENST00000600816 NBPF8Q3BBV2 869 aa23.27■■□□□ 1.32
TMEM143-211ENST00000600816 PSME1Q06323 249 aa23.26■■□□□ 1.31
TMEM143-211ENST00000600816 CDK19Q9BWU1 502 aa23.26■■□□□ 1.31
TMEM143-211ENST00000600816 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
TMEM143-211ENST00000600816 COL22A1Q8NFW1 1626 aaPredicted RBP23.24■■□□□ 1.31
TMEM143-211ENST00000600816 NUDT16Q96DE0 195 aaKnown RBP23.24■■□□□ 1.31
TMEM143-211ENST00000600816 NGLY1Q96IV0 654 aa23.24■■□□□ 1.31
TMEM143-211ENST00000600816 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
TMEM143-211ENST00000600816 CENPJQ9HC77 1338 aaPredicted RBP23.23■■□□□ 1.31
TMEM143-211ENST00000600816 ROCK2O75116 1388 aaKnown RBP23.22■■□□□ 1.31
TMEM143-211ENST00000600816 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
TMEM143-211ENST00000600816 ATP7BP35670 1465 aa23.22■■□□□ 1.31
TMEM143-211ENST00000600816 LMOD2Q6P5Q4 547 aa23.21■■□□□ 1.31
TMEM143-211ENST00000600816 SBNO1A3KN83 1393 aa23.21■■□□□ 1.31
TMEM143-211ENST00000600816 TRPM1Q7Z4N2 1603 aa23.2■■□□□ 1.3
TMEM143-211ENST00000600816 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
TMEM143-211ENST00000600816 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
TMEM143-211ENST00000600816 NGDNQ8NEJ9 315 aaKnown RBP23.19■■□□□ 1.3
TMEM143-211ENST00000600816 GPRASP1Q5JY77 1395 aa23.17■■□□□ 1.3
TMEM143-211ENST00000600816 RXRBP28702 533 aa23.17■■□□□ 1.3
TMEM143-211ENST00000600816 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
TMEM143-211ENST00000600816 FNBP4Q8N3X1 1017 aaPredicted RBP23.16■■□□□ 1.3
TMEM143-211ENST00000600816 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
TMEM143-211ENST00000600816 CABP2Q9NPB3 220 aa23.16■■□□□ 1.3
TMEM143-211ENST00000600816 USP21Q9UK80 565 aa23.16■■□□□ 1.3
TMEM143-211ENST00000600816 SRPK2P78362 688 aaKnown RBP23.15■■□□□ 1.3
TMEM143-211ENST00000600816 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
TMEM143-211ENST00000600816 ARHGEF10O15013 1369 aa23.14■■□□□ 1.29
TMEM143-211ENST00000600816 PAK3O75914 559 aaPredicted RBP23.12■■□□□ 1.29
TMEM143-211ENST00000600816 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
TMEM143-211ENST00000600816 ACEP12821 1306 aa23.11■■□□□ 1.29
TMEM143-211ENST00000600816 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
TMEM143-211ENST00000600816 QRICH2Q9H0J4 1663 aa23.1■■□□□ 1.29
TMEM143-211ENST00000600816 PLEKHG3A1L390 1219 aa23.1■■□□□ 1.29
TMEM143-211ENST00000600816 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
TMEM143-211ENST00000600816 RBM6P78332 1123 aaKnown RBP23.09■■□□□ 1.29
TMEM143-211ENST00000600816 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
TMEM143-211ENST00000600816 BCL9LQ86UU0 1499 aa23.09■■□□□ 1.29
TMEM143-211ENST00000600816 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
TMEM143-211ENST00000600816 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
TMEM143-211ENST00000600816 TOPAZ1Q8N9V7 1692 aa23.07■■□□□ 1.28
TMEM143-211ENST00000600816 RALGAPBQ86X10 1494 aa23.07■■□□□ 1.28
TMEM143-211ENST00000600816 ATRNO75882 1429 aa23.06■■□□□ 1.28
TMEM143-211ENST00000600816 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
TMEM143-211ENST00000600816 ITSN1Q15811 1721 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms