RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 SPATA31A6Q5VVP1 1343 aa33.58■■■□□ 2.97
SLC27A1-209ENST00000600297 STK26Q9P289 416 aa33.55■■■□□ 2.96
SLC27A1-209ENST00000600297 C1orf167Q5SNV9 1468 aa33.55■■■□□ 2.96
SLC27A1-209ENST00000600297 LRP6O75581 1613 aa33.54■■■□□ 2.96
SLC27A1-209ENST00000600297 SIRT1Q96EB6 747 aa33.54■■■□□ 2.96
SLC27A1-209ENST00000600297 SIN3AQ96ST3 1273 aa33.54■■■□□ 2.96
SLC27A1-209ENST00000600297 CDC42BPGQ6DT37 1551 aa33.52■■■□□ 2.96
SLC27A1-209ENST00000600297 MEX3CQ5U5Q3 659 aaKnown RBP33.52■■■□□ 2.96
SLC27A1-209ENST00000600297 ADGRB1O14514 1584 aa33.5■■■□□ 2.95
SLC27A1-209ENST00000600297 KIAA1210Q9ULL0 1709 aa33.48■■■□□ 2.95
SLC27A1-209ENST00000600297 NEUROD1Q13562 356 aa33.48■■■□□ 2.95
SLC27A1-209ENST00000600297 POTEAQ6S8J7 498 aa33.48■■■□□ 2.95
SLC27A1-209ENST00000600297 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
SLC27A1-209ENST00000600297 DDX17Q92841 729 aaKnown RBP33.46■■■□□ 2.95
SLC27A1-209ENST00000600297 L3MBTL2Q969R5 705 aa33.46■■■□□ 2.95
SLC27A1-209ENST00000600297 DLC1Q96QB1 1528 aa33.45■■■□□ 2.95
SLC27A1-209ENST00000600297 LRRC59Q96AG4 307 aaKnown RBP33.45■■■□□ 2.95
SLC27A1-209ENST00000600297 WAPLQ7Z5K2 1190 aa33.44■■■□□ 2.94
SLC27A1-209ENST00000600297 NUTM2BA6NNL0 878 aaPredicted RBP33.43■■■□□ 2.94
SLC27A1-209ENST00000600297 NUTM2EB1AL46 878 aaPredicted RBP33.43■■■□□ 2.94
SLC27A1-209ENST00000600297 NUTM2AQ8IVF1 878 aaPredicted RBP33.43■■■□□ 2.94
SLC27A1-209ENST00000600297 ORAI2Q96SN7 254 aa33.42■■■□□ 2.94
SLC27A1-209ENST00000600297 FMN2Q9NZ56 1722 aa33.39■■■□□ 2.94
SLC27A1-209ENST00000600297 PLEKHH1Q9ULM0 1364 aa33.38■■■□□ 2.93
SLC27A1-209ENST00000600297 PNPLA6Q8IY17 1366 aa33.37■■■□□ 2.93
SLC27A1-209ENST00000600297 TRAK1Q9UPV9 953 aa33.35■■■□□ 2.93
SLC27A1-209ENST00000600297 ZNF772Q68DY9 489 aaPredicted RBP33.34■■■□□ 2.93
SLC27A1-209ENST00000600297 PRAM1Q96QH2 718 aa33.34■■■□□ 2.93
SLC27A1-209ENST00000600297 ESCO1Q5FWF5 840 aa33.33■■■□□ 2.93
SLC27A1-209ENST00000600297 POGKQ9P215 609 aa33.33■■■□□ 2.93
SLC27A1-209ENST00000600297 SOS2Q07890 1332 aaPredicted RBP33.31■■■□□ 2.92
SLC27A1-209ENST00000600297 RGPD8O14715 1765 aaPredicted RBP33.31■■■□□ 2.92
SLC27A1-209ENST00000600297 NUTM2FA1L443 756 aa33.3■■■□□ 2.92
SLC27A1-209ENST00000600297 TONSLQ96HA7 1378 aa33.3■■■□□ 2.92
SLC27A1-209ENST00000600297 KIF1AQ12756 1690 aa33.29■■■□□ 2.92
SLC27A1-209ENST00000600297 ARHGEF28Q8N1W1 1705 aaKnown RBP33.28■■■□□ 2.92
SLC27A1-209ENST00000600297 NPHP3Q7Z494 1330 aa33.28■■■□□ 2.92
SLC27A1-209ENST00000600297 CLSPNQ9HAW4 1339 aa33.27■■■□□ 2.92
SLC27A1-209ENST00000600297 NBPF1Q3BBV0 1214 aa33.26■■■□□ 2.91
SLC27A1-209ENST00000600297 TRPM1Q7Z4N2 1603 aa33.25■■■□□ 2.91
SLC27A1-209ENST00000600297 COL22A1Q8NFW1 1626 aaPredicted RBP33.25■■■□□ 2.91
SLC27A1-209ENST00000600297 SAFB2Q14151 953 aaKnown RBP eCLIP33.24■■■□□ 2.91
SLC27A1-209ENST00000600297 AFF2P51816 1311 aa33.24■■■□□ 2.91
SLC27A1-209ENST00000600297 ADGRB2O60241 1585 aa33.23■■■□□ 2.91
SLC27A1-209ENST00000600297 C8orf37Q96NL8 207 aa33.22■■■□□ 2.91
SLC27A1-209ENST00000600297 PXDNQ92626 1479 aa33.22■■■□□ 2.91
SLC27A1-209ENST00000600297 FOXO3O43524 673 aa33.19■■■□□ 2.9
SLC27A1-209ENST00000600297 MARF1Q9Y4F3 1742 aaKnown RBP33.18■■■□□ 2.9
SLC27A1-209ENST00000600297 ADAMTS2O95450 1211 aa33.17■■■□□ 2.9
SLC27A1-209ENST00000600297 XPCQ01831 940 aaPredicted RBP33.17■■■□□ 2.9
SLC27A1-209ENST00000600297 ROCK2O75116 1388 aaKnown RBP33.14■■■□□ 2.9
SLC27A1-209ENST00000600297 EIF3AQ14152 1382 aaKnown RBP33.14■■■□□ 2.9
SLC27A1-209ENST00000600297 MINK1Q8N4C8 1332 aaPredicted RBP33.14■■■□□ 2.9
SLC27A1-209ENST00000600297 RXRBP28702 533 aa33.14■■■□□ 2.9
SLC27A1-209ENST00000600297 NBPF8Q3BBV2 869 aa33.13■■■□□ 2.89
SLC27A1-209ENST00000600297 NGLY1Q96IV0 654 aa33.13■■■□□ 2.89
SLC27A1-209ENST00000600297 ANKARQ7Z5J8 1434 aa33.11■■■□□ 2.89
SLC27A1-209ENST00000600297 WASLO00401 505 aaPredicted RBP33.1■■■□□ 2.89
SLC27A1-209ENST00000600297 HIRIP3Q9BW71 556 aaPredicted RBP33.1■■■□□ 2.89
SLC27A1-209ENST00000600297 TIMELESSQ9UNS1 1208 aa33.1■■■□□ 2.89
SLC27A1-209ENST00000600297 USP32Q8NFA0 1604 aa33.09■■■□□ 2.89
SLC27A1-209ENST00000600297 GPRASP1Q5JY77 1395 aa33.09■■■□□ 2.89
SLC27A1-209ENST00000600297 CENPJQ9HC77 1338 aaPredicted RBP33.07■■■□□ 2.88
SLC27A1-209ENST00000600297 PHF8Q9UPP1 1060 aa33.07■■■□□ 2.88
SLC27A1-209ENST00000600297 CDK12Q9NYV4 1490 aaPredicted RBP33.06■■■□□ 2.88
SLC27A1-209ENST00000600297 QTRT2Q9H974 415 aaKnown RBP33.05■■■□□ 2.88
SLC27A1-209ENST00000600297 TULP4Q9NRJ4 1543 aa33.05■■■□□ 2.88
SLC27A1-209ENST00000600297 RALGAPBQ86X10 1494 aa33.05■■■□□ 2.88
SLC27A1-209ENST00000600297 KRT28Q7Z3Y7 464 aa33.03■■■□□ 2.88
SLC27A1-209ENST00000600297 CCER1Q8TC90 406 aaPredicted RBP33.02■■■□□ 2.88
SLC27A1-209ENST00000600297 QRICH2Q9H0J4 1663 aa33.01■■■□□ 2.88
SLC27A1-209ENST00000600297 SPATA31A3Q5VYP0 1347 aa33.01■■■□□ 2.87
SLC27A1-209ENST00000600297 RBM6P78332 1123 aaKnown RBP33■■■□□ 2.87
SLC27A1-209ENST00000600297 USP21Q9UK80 565 aa33■■■□□ 2.87
SLC27A1-209ENST00000600297 PSME1Q06323 249 aa32.99■■■□□ 2.87
SLC27A1-209ENST00000600297 TNS3Q68CZ2 1445 aa32.99■■■□□ 2.87
SLC27A1-209ENST00000600297 ITSN1Q15811 1721 aa32.99■■■□□ 2.87
SLC27A1-209ENST00000600297 CARD11Q9BXL7 1154 aa32.98■■■□□ 2.87
SLC27A1-209ENST00000600297 CDK19Q9BWU1 502 aa32.97■■■□□ 2.87
SLC27A1-209ENST00000600297 ABCA3Q99758 1704 aa32.96■■■□□ 2.87
SLC27A1-209ENST00000600297 PRR36Q9H6K5 1346 aa32.96■■■□□ 2.87
SLC27A1-209ENST00000600297 RGS12O14924 1447 aa32.95■■■□□ 2.87
SLC27A1-209ENST00000600297 PMFBP1Q8TBY8 1022 aa32.95■■■□□ 2.87
SLC27A1-209ENST00000600297 FNBP4Q8N3X1 1017 aaPredicted RBP32.94■■■□□ 2.86
SLC27A1-209ENST00000600297 ATP7BP35670 1465 aa32.93■■■□□ 2.86
SLC27A1-209ENST00000600297 NUDT16Q96DE0 195 aaKnown RBP32.93■■■□□ 2.86
SLC27A1-209ENST00000600297 TRPC5Q9UL62 973 aaPredicted RBP32.93■■■□□ 2.86
SLC27A1-209ENST00000600297 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.93■■■□□ 2.86
SLC27A1-209ENST00000600297 TRPM3Q9HCF6 1732 aaPredicted RBP32.92■■■□□ 2.86
SLC27A1-209ENST00000600297 SBNO1A3KN83 1393 aa32.92■■■□□ 2.86
SLC27A1-209ENST00000600297 HAP1P54257 671 aaPredicted RBP32.91■■■□□ 2.86
SLC27A1-209ENST00000600297 LMOD2Q6P5Q4 547 aa32.91■■■□□ 2.86
SLC27A1-209ENST00000600297 ATRNO75882 1429 aa32.89■■■□□ 2.86
SLC27A1-209ENST00000600297 ARHGEF10O15013 1369 aa32.88■■■□□ 2.85
SLC27A1-209ENST00000600297 CCDC61Q9Y6R9 512 aa32.88■■■□□ 2.85
SLC27A1-209ENST00000600297 PLEKHG5O94827 1062 aa32.87■■■□□ 2.85
SLC27A1-209ENST00000600297 SBNO2Q9Y2G9 1366 aa32.86■■■□□ 2.85
SLC27A1-209ENST00000600297 EVC2Q86UK5 1308 aa32.86■■■□□ 2.85
SLC27A1-209ENST00000600297 SRPK2P78362 688 aaKnown RBP32.86■■■□□ 2.85
SLC27A1-209ENST00000600297 UPF1Q92900 1129 aaKnown RBP eCLIP32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms