RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 DEPDC5O75140 1603 aa15□□□□□ -0.01
ARHGEF1-220ENST00000600274 PDE4AP27815 886 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 KIF1BO60333 1816 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 LAMC1P11047 1609 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 MLH3Q9UHC1 1453 aa14.99□□□□□ -0.01
ARHGEF1-220ENST00000600274 SLC52A1Q9NWF4 448 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 MROH2AA6NES4 1674 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 RPGRIP1LQ68CZ1 1315 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 SOX12O15370 315 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
ARHGEF1-220ENST00000600274 VWDEQ8N2E2 1590 aa14.97□□□□□ -0.01
ARHGEF1-220ENST00000600274 E9PSI1 815 aa14.97□□□□□ -0.01
ARHGEF1-220ENST00000600274 HECW2Q9P2P5 1572 aa14.97□□□□□ -0.01
ARHGEF1-220ENST00000600274 FRMPD1Q5SYB0 1578 aa14.97□□□□□ -0.01
ARHGEF1-220ENST00000600274 ABCC3O15438 1527 aa14.96□□□□□ -0.01
ARHGEF1-220ENST00000600274 MYOM2P54296 1465 aa14.96□□□□□ -0.01
ARHGEF1-220ENST00000600274 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
ARHGEF1-220ENST00000600274 SYNMO15061 1565 aa14.96□□□□□ -0.02
ARHGEF1-220ENST00000600274 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.02
ARHGEF1-220ENST00000600274 TCERG1O14776 1098 aaKnown RBP14.95□□□□□ -0.02
ARHGEF1-220ENST00000600274 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
ARHGEF1-220ENST00000600274 ZMYM4Q5VZL5 1548 aa14.95□□□□□ -0.02
ARHGEF1-220ENST00000600274 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
ARHGEF1-220ENST00000600274 RUNDC1Q96C34 613 aa14.95□□□□□ -0.02
ARHGEF1-220ENST00000600274 TNNQ9UQP3 1299 aa14.94□□□□□ -0.02
ARHGEF1-220ENST00000600274 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
ARHGEF1-220ENST00000600274 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
ARHGEF1-220ENST00000600274 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF1-220ENST00000600274 MAPK8IP3Q9UPT6 1336 aa14.93□□□□□ -0.02
ARHGEF1-220ENST00000600274 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
ARHGEF1-220ENST00000600274 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
ARHGEF1-220ENST00000600274 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
ARHGEF1-220ENST00000600274 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
ARHGEF1-220ENST00000600274 ADGRB3O60242 1522 aa14.92□□□□□ -0.02
ARHGEF1-220ENST00000600274 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
ARHGEF1-220ENST00000600274 NEO1Q92859 1461 aa14.91□□□□□ -0.02
ARHGEF1-220ENST00000600274 HMOX1P09601 288 aa14.91□□□□□ -0.02
ARHGEF1-220ENST00000600274 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF1-220ENST00000600274 A0A1W2PP64 1363 aa14.9□□□□□ -0.02
ARHGEF1-220ENST00000600274 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
ARHGEF1-220ENST00000600274 NPC1L1Q9UHC9 1359 aa14.89□□□□□ -0.03
ARHGEF1-220ENST00000600274 FYB1O15117 783 aa14.88□□□□□ -0.03
ARHGEF1-220ENST00000600274 CEBPAP49715 358 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF1-220ENST00000600274 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
ARHGEF1-220ENST00000600274 BACH2Q9BYV9 841 aa14.88□□□□□ -0.03
ARHGEF1-220ENST00000600274 FTSJ3Q8IY81 847 aaKnown RBP14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 CENPQQ7L2Z9 268 aaPredicted RBP14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 MYOM1P52179 1685 aa14.87□□□□□ -0.03
ARHGEF1-220ENST00000600274 NEFMP07197 916 aa14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 POLR3AO14802 1390 aaPredicted RBP14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 RIPK4P57078 832 aa14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 SBNO2Q9Y2G9 1366 aa14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 CFAP74Q9C0B2 1584 aa14.86□□□□□ -0.03
ARHGEF1-220ENST00000600274 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
ARHGEF1-220ENST00000600274 IGHDP01880 384 aa14.85□□□□□ -0.03
ARHGEF1-220ENST00000600274 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
ARHGEF1-220ENST00000600274 DIAPH1O60610 1272 aaKnown RBP14.85□□□□□ -0.03
ARHGEF1-220ENST00000600274 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
ARHGEF1-220ENST00000600274 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
ARHGEF1-220ENST00000600274 NRXN1Q9ULB1 1477 aa14.84□□□□□ -0.03
ARHGEF1-220ENST00000600274 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
ARHGEF1-220ENST00000600274 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
ARHGEF1-220ENST00000600274 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.03
ARHGEF1-220ENST00000600274 NME9Q86XW9 330 aa14.83□□□□□ -0.03
ARHGEF1-220ENST00000600274 RLBP1P12271 317 aa14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 QRICH2Q9H0J4 1663 aa14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 GLI2P10070 1586 aa14.83□□□□□ -0.04
ARHGEF1-220ENST00000600274 SIGLEC1Q9BZZ2 1709 aa14.82□□□□□ -0.04
ARHGEF1-220ENST00000600274 PRKAR2BP31323 418 aa14.82□□□□□ -0.04
ARHGEF1-220ENST00000600274 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
ARHGEF1-220ENST00000600274 TMPOP42166 694 aaKnown RBP14.81□□□□□ -0.04
ARHGEF1-220ENST00000600274 TULP4Q9NRJ4 1543 aa14.81□□□□□ -0.04
ARHGEF1-220ENST00000600274 ITPRIPQ8IWB1 547 aa14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 NEXMIFQ5QGS0 1516 aa14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 INSRP06213 1382 aa14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 ATAD2Q6PL18 1390 aa14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 MS4A1P11836 297 aa14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
ARHGEF1-220ENST00000600274 KIAA1210Q9ULL0 1709 aa14.79□□□□□ -0.04
ARHGEF1-220ENST00000600274 IL27Q8NEV9 243 aa14.79□□□□□ -0.04
ARHGEF1-220ENST00000600274 PPLO60437 1756 aa14.79□□□□□ -0.04
ARHGEF1-220ENST00000600274 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
ARHGEF1-220ENST00000600274 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
ARHGEF1-220ENST00000600274 ARXQ96QS3 562 aa14.77□□□□□ -0.04
ARHGEF1-220ENST00000600274 PIK3C2BO00750 1634 aa14.77□□□□□ -0.05
ARHGEF1-220ENST00000600274 WDR63Q8IWG1 891 aa14.77□□□□□ -0.05
ARHGEF1-220ENST00000600274 NUDT16Q96DE0 195 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms