RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SAFB2Q14151 953 aaKnown RBP eCLIP40.62■■■■■ 4.09
SSBP4-206ENST00000599699 C1orf167Q5SNV9 1468 aa40.58■■■■■ 4.09
SSBP4-206ENST00000599699 PHLPP1O60346 1717 aa40.58■■■■■ 4.09
SSBP4-206ENST00000599699 DLC1Q96QB1 1528 aa40.57■■■■■ 4.08
SSBP4-206ENST00000599699 DISP3Q9P2K9 1392 aa40.56■■■■■ 4.08
SSBP4-206ENST00000599699 CDC42BPGQ6DT37 1551 aa40.56■■■■■ 4.08
SSBP4-206ENST00000599699 NUTM2FA1L443 756 aa40.51■■■■■ 4.08
SSBP4-206ENST00000599699 ORAI2Q96SN7 254 aa40.51■■■■■ 4.08
SSBP4-206ENST00000599699 NBPF1Q3BBV0 1214 aa40.5■■■■■ 4.07
SSBP4-206ENST00000599699 AHDC1Q5TGY3 1603 aaPredicted RBP40.49■■■■■ 4.07
SSBP4-206ENST00000599699 KIAA1210Q9ULL0 1709 aa40.48■■■■■ 4.07
SSBP4-206ENST00000599699 TONSLQ96HA7 1378 aa40.47■■■■■ 4.07
SSBP4-206ENST00000599699 ESCO1Q5FWF5 840 aa40.46■■■■■ 4.07
SSBP4-206ENST00000599699 DDX17Q92841 729 aaKnown RBP40.45■■■■■ 4.07
SSBP4-206ENST00000599699 COL16A1Q07092 1604 aaPredicted RBP40.45■■■■■ 4.07
SSBP4-206ENST00000599699 JCADQ9P266 1359 aa40.43■■■■■ 4.06
SSBP4-206ENST00000599699 MED1Q15648 1581 aaPredicted RBP40.43■■■■■ 4.06
SSBP4-206ENST00000599699 MINK1Q8N4C8 1332 aaPredicted RBP40.42■■■■■ 4.06
SSBP4-206ENST00000599699 HIRIP3Q9BW71 556 aaPredicted RBP40.42■■■■■ 4.06
SSBP4-206ENST00000599699 NHSL1Q5SYE7 1610 aa40.37■■■■■ 4.05
SSBP4-206ENST00000599699 FMN2Q9NZ56 1722 aa40.36■■■■■ 4.05
SSBP4-206ENST00000599699 ARHGEF28Q8N1W1 1705 aaKnown RBP40.34■■■■■ 4.05
SSBP4-206ENST00000599699 LRRC59Q96AG4 307 aaKnown RBP40.33■■■■■ 4.05
SSBP4-206ENST00000599699 PHF23Q9BUL5 403 aaPredicted RBP40.33■■■■■ 4.05
SSBP4-206ENST00000599699 ROCK2O75116 1388 aaKnown RBP40.31■■■■■ 4.04
SSBP4-206ENST00000599699 NBPF8Q3BBV2 869 aa40.3■■■■■ 4.04
SSBP4-206ENST00000599699 FOXO3O43524 673 aa40.29■■■■■ 4.04
SSBP4-206ENST00000599699 ADGRB2O60241 1585 aa40.29■■■■■ 4.04
SSBP4-206ENST00000599699 NPHP3Q7Z494 1330 aa40.29■■■■■ 4.04
SSBP4-206ENST00000599699 TRPM1Q7Z4N2 1603 aa40.28■■■■■ 4.04
SSBP4-206ENST00000599699 WASLO00401 505 aaPredicted RBP40.27■■■■■ 4.04
SSBP4-206ENST00000599699 SOS2Q07890 1332 aaPredicted RBP40.25■■■■■ 4.03
SSBP4-206ENST00000599699 EIF3AQ14152 1382 aaKnown RBP40.24■■■■■ 4.03
SSBP4-206ENST00000599699 SPATA31A6Q5VVP1 1343 aa40.24■■■■■ 4.03
SSBP4-206ENST00000599699 PHF8Q9UPP1 1060 aa40.23■■■■■ 4.03
SSBP4-206ENST00000599699 CENPJQ9HC77 1338 aaPredicted RBP40.22■■■■■ 4.03
SSBP4-206ENST00000599699 XPCQ01831 940 aaPredicted RBP40.22■■■■■ 4.03
SSBP4-206ENST00000599699 ANKARQ7Z5J8 1434 aa40.22■■■■■ 4.03
SSBP4-206ENST00000599699 SHPRHQ149N8 1683 aa40.21■■■■■ 4.03
SSBP4-206ENST00000599699 NUTM2BA6NNL0 878 aaPredicted RBP40.18■■■■■ 4.02
SSBP4-206ENST00000599699 NUTM2EB1AL46 878 aaPredicted RBP40.18■■■■■ 4.02
SSBP4-206ENST00000599699 NUTM2AQ8IVF1 878 aaPredicted RBP40.18■■■■■ 4.02
SSBP4-206ENST00000599699 CLSPNQ9HAW4 1339 aa40.17■■■■■ 4.02
SSBP4-206ENST00000599699 KIF1AQ12756 1690 aa40.17■■■■■ 4.02
SSBP4-206ENST00000599699 RGPD8O14715 1765 aaPredicted RBP40.16■■■■■ 4.02
SSBP4-206ENST00000599699 CCER1Q8TC90 406 aaPredicted RBP40.16■■■■■ 4.02
SSBP4-206ENST00000599699 TULP4Q9NRJ4 1543 aa40.16■■■■■ 4.02
SSBP4-206ENST00000599699 PNPLA6Q8IY17 1366 aa40.15■■■■■ 4.02
SSBP4-206ENST00000599699 MEX3CQ5U5Q3 659 aaKnown RBP40.15■■■■■ 4.02
SSBP4-206ENST00000599699 PMFBP1Q8TBY8 1022 aa40.15■■■■■ 4.02
SSBP4-206ENST00000599699 CDK19Q9BWU1 502 aa40.15■■■■■ 4.02
SSBP4-206ENST00000599699 PRR36Q9H6K5 1346 aa40.14■■■■■ 4.02
SSBP4-206ENST00000599699 PXDNQ92626 1479 aa40.13■■■■■ 4.02
SSBP4-206ENST00000599699 USP32Q8NFA0 1604 aa40.13■■■■■ 4.01
SSBP4-206ENST00000599699 KRT28Q7Z3Y7 464 aa40.12■■■■■ 4.01
SSBP4-206ENST00000599699 CARD11Q9BXL7 1154 aa40.12■■■■■ 4.01
SSBP4-206ENST00000599699 GPRASP1Q5JY77 1395 aa40.1■■■■■ 4.01
SSBP4-206ENST00000599699 LRP6O75581 1613 aa40.09■■■■■ 4.01
SSBP4-206ENST00000599699 PSME1Q06323 249 aa40.09■■■■■ 4.01
SSBP4-206ENST00000599699 NUDT16Q96DE0 195 aaKnown RBP40.09■■■■■ 4.01
SSBP4-206ENST00000599699 RALGAPBQ86X10 1494 aa40.08■■■■■ 4.01
SSBP4-206ENST00000599699 ILDR2Q71H61 639 aa40.07■■■■■ 4.01
SSBP4-206ENST00000599699 SRPK2P78362 688 aaKnown RBP40.05■■■■■ 4
SSBP4-206ENST00000599699 QRICH2Q9H0J4 1663 aa40.05■■■■■ 4
SSBP4-206ENST00000599699 ATP7BP35670 1465 aa40.02■■■■■ 4
SSBP4-206ENST00000599699 NGDNQ8NEJ9 315 aaKnown RBP40.02■■■■■ 4
SSBP4-206ENST00000599699 RGS17Q9UGC6 210 aaPredicted RBP40■■■■□ 3.99
SSBP4-206ENST00000599699 TIMELESSQ9UNS1 1208 aa40■■■■□ 3.99
SSBP4-206ENST00000599699 SPATA31A3Q5VYP0 1347 aa39.99■■■■□ 3.99
SSBP4-206ENST00000599699 CABP2Q9NPB3 220 aa39.98■■■■□ 3.99
SSBP4-206ENST00000599699 CCDC61Q9Y6R9 512 aa39.97■■■■□ 3.99
SSBP4-206ENST00000599699 EVC2Q86UK5 1308 aa39.96■■■■□ 3.99
SSBP4-206ENST00000599699 LMOD2Q6P5Q4 547 aa39.96■■■■□ 3.99
SSBP4-206ENST00000599699 ADAMTS2O95450 1211 aa39.95■■■■□ 3.99
SSBP4-206ENST00000599699 ITSN1Q15811 1721 aa39.94■■■■□ 3.98
SSBP4-206ENST00000599699 SBNO1A3KN83 1393 aa39.93■■■■□ 3.98
SSBP4-206ENST00000599699 TNS3Q68CZ2 1445 aa39.92■■■■□ 3.98
SSBP4-206ENST00000599699 C8orf37Q96NL8 207 aa39.91■■■■□ 3.98
SSBP4-206ENST00000599699 COL22A1Q8NFW1 1626 aaPredicted RBP39.9■■■■□ 3.98
SSBP4-206ENST00000599699 PLEKHG5O94827 1062 aa39.88■■■■□ 3.97
SSBP4-206ENST00000599699 PAK3O75914 559 aaPredicted RBP39.86■■■■□ 3.97
SSBP4-206ENST00000599699 ACEP12821 1306 aa39.86■■■■□ 3.97
SSBP4-206ENST00000599699 ARHGEF10O15013 1369 aa39.85■■■■□ 3.97
SSBP4-206ENST00000599699 PPIP5K1Q6PFW1 1433 aa39.85■■■■□ 3.97
SSBP4-206ENST00000599699 PLEKHG3A1L390 1219 aa39.85■■■■□ 3.97
SSBP4-206ENST00000599699 POTEAQ6S8J7 498 aa39.85■■■■□ 3.97
SSBP4-206ENST00000599699 TOPAZ1Q8N9V7 1692 aa39.84■■■■□ 3.97
SSBP4-206ENST00000599699 ZNF772Q68DY9 489 aaPredicted RBP39.84■■■■□ 3.97
SSBP4-206ENST00000599699 HAP1P54257 671 aaPredicted RBP39.83■■■■□ 3.97
SSBP4-206ENST00000599699 NGLY1Q96IV0 654 aa39.83■■■■□ 3.97
SSBP4-206ENST00000599699 AFF2P51816 1311 aa39.83■■■■□ 3.97
SSBP4-206ENST00000599699 POLR3AO14802 1390 aaPredicted RBP39.8■■■■□ 3.96
SSBP4-206ENST00000599699 SBNO2Q9Y2G9 1366 aa39.8■■■■□ 3.96
SSBP4-206ENST00000599699 CABP1Q9NZU7 370 aa39.79■■■■□ 3.96
SSBP4-206ENST00000599699 CABLES1Q8TDN4 633 aa39.78■■■■□ 3.96
SSBP4-206ENST00000599699 TRPM3Q9HCF6 1732 aaPredicted RBP39.77■■■■□ 3.96
SSBP4-206ENST00000599699 ST20-MTHFSA0A0A6YYL1 179 aa39.75■■■■□ 3.95
SSBP4-206ENST00000599699 ATAD2Q6PL18 1390 aa39.71■■■■□ 3.95
SSBP4-206ENST00000599699 USP47Q96K76 1375 aa39.7■■■■□ 3.95
SSBP4-206ENST00000599699 ALS2Q96Q42 1657 aa39.67■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms