RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
IRF3-224ENST00000599680 DCAF11Q8TEB1 546 aa20.9■□□□□ 0.94
IRF3-224ENST00000599680 SPATA31A6Q5VVP1 1343 aa20.89■□□□□ 0.93
IRF3-224ENST00000599680 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
IRF3-224ENST00000599680 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
IRF3-224ENST00000599680 LRRC59Q96AG4 307 aaKnown RBP20.86■□□□□ 0.93
IRF3-224ENST00000599680 STAC3Q96MF2 364 aa20.86■□□□□ 0.93
IRF3-224ENST00000599680 PLEKHH1Q9ULM0 1364 aa20.85■□□□□ 0.93
IRF3-224ENST00000599680 DDX17Q92841 729 aaKnown RBP20.85■□□□□ 0.93
IRF3-224ENST00000599680 ORAI2Q96SN7 254 aa20.85■□□□□ 0.93
IRF3-224ENST00000599680 LRP6O75581 1613 aa20.84■□□□□ 0.93
IRF3-224ENST00000599680 DLC1Q96QB1 1528 aa20.83■□□□□ 0.93
IRF3-224ENST00000599680 KIF1AQ12756 1690 aa20.83■□□□□ 0.93
IRF3-224ENST00000599680 ESCO1Q5FWF5 840 aa20.83■□□□□ 0.93
IRF3-224ENST00000599680 SIRT1Q96EB6 747 aa20.83■□□□□ 0.93
IRF3-224ENST00000599680 ADGRB1O14514 1584 aa20.83■□□□□ 0.92
IRF3-224ENST00000599680 NUTM2FA1L443 756 aa20.82■□□□□ 0.92
IRF3-224ENST00000599680 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
IRF3-224ENST00000599680 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
IRF3-224ENST00000599680 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
IRF3-224ENST00000599680 POGKQ9P215 609 aa20.82■□□□□ 0.92
IRF3-224ENST00000599680 KIAA1210Q9ULL0 1709 aa20.81■□□□□ 0.92
IRF3-224ENST00000599680 RGS17Q9UGC6 210 aaPredicted RBP20.81■□□□□ 0.92
IRF3-224ENST00000599680 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
IRF3-224ENST00000599680 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
IRF3-224ENST00000599680 ARHGEF28Q8N1W1 1705 aaKnown RBP20.79■□□□□ 0.92
IRF3-224ENST00000599680 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
IRF3-224ENST00000599680 PNPLA6Q8IY17 1366 aa20.78■□□□□ 0.92
IRF3-224ENST00000599680 TRAK1Q9UPV9 953 aa20.78■□□□□ 0.92
IRF3-224ENST00000599680 SOS2Q07890 1332 aaPredicted RBP20.77■□□□□ 0.91
IRF3-224ENST00000599680 ADGRB2O60241 1585 aa20.76■□□□□ 0.91
IRF3-224ENST00000599680 POTEAQ6S8J7 498 aa20.75■□□□□ 0.91
IRF3-224ENST00000599680 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
IRF3-224ENST00000599680 MARF1Q9Y4F3 1742 aaKnown RBP20.73■□□□□ 0.91
IRF3-224ENST00000599680 FOXO3O43524 673 aa20.73■□□□□ 0.91
IRF3-224ENST00000599680 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
IRF3-224ENST00000599680 PXDNQ92626 1479 aa20.73■□□□□ 0.91
IRF3-224ENST00000599680 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
IRF3-224ENST00000599680 ITSN1Q15811 1721 aa20.71■□□□□ 0.91
IRF3-224ENST00000599680 XPCQ01831 940 aaPredicted RBP20.71■□□□□ 0.91
IRF3-224ENST00000599680 MINK1Q8N4C8 1332 aaPredicted RBP20.7■□□□□ 0.9
IRF3-224ENST00000599680 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
IRF3-224ENST00000599680 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
IRF3-224ENST00000599680 ANKARQ7Z5J8 1434 aa20.69■□□□□ 0.9
IRF3-224ENST00000599680 C8orf37Q96NL8 207 aa20.68■□□□□ 0.9
IRF3-224ENST00000599680 PHF8Q9UPP1 1060 aa20.68■□□□□ 0.9
IRF3-224ENST00000599680 AFF2P51816 1311 aa20.68■□□□□ 0.9
IRF3-224ENST00000599680 ADAMTS2O95450 1211 aa20.67■□□□□ 0.9
IRF3-224ENST00000599680 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
IRF3-224ENST00000599680 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
IRF3-224ENST00000599680 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
IRF3-224ENST00000599680 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
IRF3-224ENST00000599680 PSME1Q06323 249 aa20.64■□□□□ 0.89
IRF3-224ENST00000599680 KRT28Q7Z3Y7 464 aa20.64■□□□□ 0.89
IRF3-224ENST00000599680 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
IRF3-224ENST00000599680 TRPM1Q7Z4N2 1603 aa20.64■□□□□ 0.89
IRF3-224ENST00000599680 QRICH2Q9H0J4 1663 aa20.62■□□□□ 0.89
IRF3-224ENST00000599680 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
IRF3-224ENST00000599680 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
IRF3-224ENST00000599680 PMFBP1Q8TBY8 1022 aa20.61■□□□□ 0.89
IRF3-224ENST00000599680 TNS3Q68CZ2 1445 aa20.61■□□□□ 0.89
IRF3-224ENST00000599680 SPATA31A3Q5VYP0 1347 aa20.6■□□□□ 0.89
IRF3-224ENST00000599680 RXRBP28702 533 aa20.6■□□□□ 0.89
IRF3-224ENST00000599680 NBPF1Q3BBV0 1214 aa20.6■□□□□ 0.89
IRF3-224ENST00000599680 ABCA3Q99758 1704 aa20.6■□□□□ 0.89
IRF3-224ENST00000599680 TRPM3Q9HCF6 1732 aaPredicted RBP20.59■□□□□ 0.89
IRF3-224ENST00000599680 HAP1P54257 671 aaPredicted RBP20.58■□□□□ 0.89
IRF3-224ENST00000599680 LMOD2Q6P5Q4 547 aa20.58■□□□□ 0.89
IRF3-224ENST00000599680 TOPAZ1Q8N9V7 1692 aa20.57■□□□□ 0.88
IRF3-224ENST00000599680 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
IRF3-224ENST00000599680 QTRT2Q9H974 415 aaKnown RBP20.56■□□□□ 0.88
IRF3-224ENST00000599680 SBNO1A3KN83 1393 aa20.56■□□□□ 0.88
IRF3-224ENST00000599680 PRR36Q9H6K5 1346 aa20.55■□□□□ 0.88
IRF3-224ENST00000599680 ALS2Q96Q42 1657 aa20.55■□□□□ 0.88
IRF3-224ENST00000599680 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
IRF3-224ENST00000599680 USP21Q9UK80 565 aa20.55■□□□□ 0.88
IRF3-224ENST00000599680 ARHGEF10O15013 1369 aa20.55■□□□□ 0.88
IRF3-224ENST00000599680 ATP7BP35670 1465 aa20.55■□□□□ 0.88
IRF3-224ENST00000599680 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.54■□□□□ 0.88
IRF3-224ENST00000599680 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
IRF3-224ENST00000599680 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
IRF3-224ENST00000599680 CENPJQ9HC77 1338 aaPredicted RBP20.53■□□□□ 0.88
IRF3-224ENST00000599680 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
IRF3-224ENST00000599680 CDK19Q9BWU1 502 aa20.53■□□□□ 0.88
IRF3-224ENST00000599680 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
IRF3-224ENST00000599680 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.88
IRF3-224ENST00000599680 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.88
IRF3-224ENST00000599680 TONSLQ96HA7 1378 aa20.51■□□□□ 0.87
IRF3-224ENST00000599680 FNBP4Q8N3X1 1017 aaPredicted RBP20.5■□□□□ 0.87
IRF3-224ENST00000599680 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
IRF3-224ENST00000599680 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
IRF3-224ENST00000599680 PAK3O75914 559 aaPredicted RBP20.49■□□□□ 0.87
IRF3-224ENST00000599680 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
IRF3-224ENST00000599680 CABLES1Q8TDN4 633 aa20.48■□□□□ 0.87
IRF3-224ENST00000599680 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
IRF3-224ENST00000599680 RGS12O14924 1447 aa20.46■□□□□ 0.87
IRF3-224ENST00000599680 ATRNO75882 1429 aa20.46■□□□□ 0.87
IRF3-224ENST00000599680 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
IRF3-224ENST00000599680 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
IRF3-224ENST00000599680 PHRF1Q9P1Y6 1649 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms