RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
SCN8A-208ENST00000599343 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
SCN8A-208ENST00000599343 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.28□□□□□ -0.12
SCN8A-208ENST00000599343 TSPYL4Q9UJ04 414 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 HMOX1P09601 288 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 ERC2O15083 957 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
SCN8A-208ENST00000599343 AIMP1Q12904 312 aaKnown RBP14.27□□□□□ -0.12
SCN8A-208ENST00000599343 RALYLQ86SE5 291 aaKnown RBP14.27□□□□□ -0.12
SCN8A-208ENST00000599343 RUNDC1Q96C34 613 aa14.27□□□□□ -0.12
SCN8A-208ENST00000599343 ZFYVE27Q5T4F4 411 aa14.27□□□□□ -0.13
SCN8A-208ENST00000599343 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.13
SCN8A-208ENST00000599343 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.13
SCN8A-208ENST00000599343 EPS15P42566 896 aa14.27□□□□□ -0.13
SCN8A-208ENST00000599343 MAP7D2Q96T17 732 aa14.26□□□□□ -0.13
SCN8A-208ENST00000599343 CDC45O75419 566 aa14.26□□□□□ -0.13
SCN8A-208ENST00000599343 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
SCN8A-208ENST00000599343 SDF4Q9BRK5 362 aa14.26□□□□□ -0.13
SCN8A-208ENST00000599343 NAT10Q9H0A0 1025 aaKnown RBP14.26□□□□□ -0.13
SCN8A-208ENST00000599343 MRE11P49959 708 aa14.26□□□□□ -0.13
SCN8A-208ENST00000599343 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
SCN8A-208ENST00000599343 OFD1O75665 1012 aa14.25□□□□□ -0.13
SCN8A-208ENST00000599343 SMC2O95347 1197 aa14.25□□□□□ -0.13
SCN8A-208ENST00000599343 RIC3Q7Z5B4 369 aa14.24□□□□□ -0.13
SCN8A-208ENST00000599343 TRIM5Q9C035 493 aa14.24□□□□□ -0.13
SCN8A-208ENST00000599343 H0YHG0 523 aa14.24□□□□□ -0.13
SCN8A-208ENST00000599343 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
SCN8A-208ENST00000599343 TRAK2O60296 914 aa14.23□□□□□ -0.13
SCN8A-208ENST00000599343 GNAI1P63096 354 aa14.23□□□□□ -0.13
SCN8A-208ENST00000599343 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
SCN8A-208ENST00000599343 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
SCN8A-208ENST00000599343 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
SCN8A-208ENST00000599343 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
SCN8A-208ENST00000599343 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
SCN8A-208ENST00000599343 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
SCN8A-208ENST00000599343 RBM10P98175 930 aaKnown RBP14.22□□□□□ -0.13
SCN8A-208ENST00000599343 PSME1Q06323 249 aa14.22□□□□□ -0.13
SCN8A-208ENST00000599343 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
SCN8A-208ENST00000599343 CCDC173Q0VFZ6 552 aa14.21□□□□□ -0.13
SCN8A-208ENST00000599343 RBM33Q96EV2 1170 aaKnown RBP14.21□□□□□ -0.13
SCN8A-208ENST00000599343 FSD1Q9BTV5 496 aa14.21□□□□□ -0.13
SCN8A-208ENST00000599343 NINLQ9Y2I6 1382 aa14.21□□□□□ -0.13
SCN8A-208ENST00000599343 PRPF40AO75400 957 aaKnown RBP14.21□□□□□ -0.13
SCN8A-208ENST00000599343 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.13
SCN8A-208ENST00000599343 TSPY26PQ9H489 355 aa14.21□□□□□ -0.13
SCN8A-208ENST00000599343 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
SCN8A-208ENST00000599343 SPC24Q8NBT2 197 aa14.21□□□□□ -0.14
SCN8A-208ENST00000599343 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
SCN8A-208ENST00000599343 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
SCN8A-208ENST00000599343 CNTROBQ8N137 903 aa14.2□□□□□ -0.14
SCN8A-208ENST00000599343 PSMA5P28066 241 aa14.2□□□□□ -0.14
SCN8A-208ENST00000599343 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
SCN8A-208ENST00000599343 CWC15Q9P013 229 aaKnown RBP14.2□□□□□ -0.14
SCN8A-208ENST00000599343 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
SCN8A-208ENST00000599343 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
SCN8A-208ENST00000599343 DCTN1Q14203 1278 aa14.19□□□□□ -0.14
SCN8A-208ENST00000599343 ERCC4Q92889 916 aaPredicted RBP14.19□□□□□ -0.14
SCN8A-208ENST00000599343 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
SCN8A-208ENST00000599343 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
SCN8A-208ENST00000599343 XBP1P17861 261 aa14.18□□□□□ -0.14
SCN8A-208ENST00000599343 KINO60870 393 aaKnown RBP14.18□□□□□ -0.14
SCN8A-208ENST00000599343 NEK4P51957 841 aa14.18□□□□□ -0.14
SCN8A-208ENST00000599343 PLCD4Q9BRC7 762 aa14.18□□□□□ -0.14
SCN8A-208ENST00000599343 C1orf115Q9H7X2 142 aa14.18□□□□□ -0.14
SCN8A-208ENST00000599343 FIBPO43427 364 aa14.17□□□□□ -0.14
SCN8A-208ENST00000599343 LETM1O95202 739 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-208ENST00000599343 RDXP35241 583 aaKnown RBP14.17□□□□□ -0.14
SCN8A-208ENST00000599343 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-208ENST00000599343 MPNDQ8N594 471 aa14.17□□□□□ -0.14
SCN8A-208ENST00000599343 TSPYL1Q9H0U9 437 aa14.17□□□□□ -0.14
SCN8A-208ENST00000599343 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-208ENST00000599343 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
SCN8A-208ENST00000599343 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
SCN8A-208ENST00000599343 KIF7Q2M1P5 1343 aa14.16□□□□□ -0.14
SCN8A-208ENST00000599343 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
SCN8A-208ENST00000599343 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
SCN8A-208ENST00000599343 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
SCN8A-208ENST00000599343 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
SCN8A-208ENST00000599343 MTERF4Q7Z6M4 381 aaKnown RBP14.15□□□□□ -0.14
SCN8A-208ENST00000599343 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
SCN8A-208ENST00000599343 FILIP1LQ4L180 1135 aa14.15□□□□□ -0.14
SCN8A-208ENST00000599343 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
SCN8A-208ENST00000599343 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
SCN8A-208ENST00000599343 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 MYO6Q9UM54 1294 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 CDCA7LQ96GN5 454 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 CDK5RAP3Q96JB5 506 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 CCDC66A2RUB6 948 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 MBD3O95983 291 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 LEKR1Q6ZMV7 388 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
SCN8A-208ENST00000599343 JPH4Q96JJ6 628 aa14.14□□□□□ -0.15
SCN8A-208ENST00000599343 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
SCN8A-208ENST00000599343 IL27Q8NEV9 243 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 STK3Q13188 491 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms