RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
PDE4C-214ENST00000599188 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
PDE4C-214ENST00000599188 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
PDE4C-214ENST00000599188 NUTM2DQ5VT03 806 aaPredicted RBP16.22■□□□□ 0.19
PDE4C-214ENST00000599188 TNRQ92752 1358 aa16.21■□□□□ 0.19
PDE4C-214ENST00000599188 MSH5O43196 834 aa16.21■□□□□ 0.19
PDE4C-214ENST00000599188 IDI1Q13907 227 aa16.21■□□□□ 0.19
PDE4C-214ENST00000599188 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
PDE4C-214ENST00000599188 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.19
PDE4C-214ENST00000599188 SLC52A1Q9NWF4 448 aa16.2■□□□□ 0.18
PDE4C-214ENST00000599188 PLIN1O60240 522 aa16.19■□□□□ 0.18
PDE4C-214ENST00000599188 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
PDE4C-214ENST00000599188 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
PDE4C-214ENST00000599188 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
PDE4C-214ENST00000599188 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
PDE4C-214ENST00000599188 CCDC146Q8IYE0 955 aa16.19■□□□□ 0.18
PDE4C-214ENST00000599188 NCKAP5LQ9HCH0 1330 aa16.18■□□□□ 0.18
PDE4C-214ENST00000599188 ARHGEF28Q8N1W1 1705 aaKnown RBP16.18■□□□□ 0.18
PDE4C-214ENST00000599188 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
PDE4C-214ENST00000599188 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
PDE4C-214ENST00000599188 EVC2Q86UK5 1308 aa16.16■□□□□ 0.18
PDE4C-214ENST00000599188 PUS7Q96PZ0 661 aaKnown RBP16.16■□□□□ 0.18
PDE4C-214ENST00000599188 ZNF142P52746 1687 aaPredicted RBP16.15■□□□□ 0.18
PDE4C-214ENST00000599188 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
PDE4C-214ENST00000599188 APAF1O14727 1248 aa16.15■□□□□ 0.18
PDE4C-214ENST00000599188 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
PDE4C-214ENST00000599188 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
PDE4C-214ENST00000599188 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
PDE4C-214ENST00000599188 TMEM131LA2VDJ0 1609 aa16.14■□□□□ 0.17
PDE4C-214ENST00000599188 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
PDE4C-214ENST00000599188 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
PDE4C-214ENST00000599188 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
PDE4C-214ENST00000599188 TRMT2AQ8IZ69 625 aaKnown RBP16.13■□□□□ 0.17
PDE4C-214ENST00000599188 MYO5BQ9ULV0 1848 aa16.13■□□□□ 0.17
PDE4C-214ENST00000599188 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
PDE4C-214ENST00000599188 NGEFQ8N5V2 710 aa16.12■□□□□ 0.17
PDE4C-214ENST00000599188 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
PDE4C-214ENST00000599188 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
PDE4C-214ENST00000599188 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
PDE4C-214ENST00000599188 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
PDE4C-214ENST00000599188 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
PDE4C-214ENST00000599188 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
PDE4C-214ENST00000599188 SAFB2Q14151 953 aaKnown RBP eCLIP16.09■□□□□ 0.17
PDE4C-214ENST00000599188 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
PDE4C-214ENST00000599188 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
PDE4C-214ENST00000599188 STK26Q9P289 416 aa16.09■□□□□ 0.17
PDE4C-214ENST00000599188 NLRP1Q9C000 1473 aa16.08■□□□□ 0.17
PDE4C-214ENST00000599188 E9PSI1 815 aa16.08■□□□□ 0.16
PDE4C-214ENST00000599188 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
PDE4C-214ENST00000599188 THEMISQ8N1K5 641 aaPredicted RBP16.07■□□□□ 0.16
PDE4C-214ENST00000599188 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
PDE4C-214ENST00000599188 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
PDE4C-214ENST00000599188 NSD2O96028 1365 aa16.07■□□□□ 0.16
PDE4C-214ENST00000599188 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
PDE4C-214ENST00000599188 DMRT2Q9Y5R5 561 aa16.06■□□□□ 0.16
PDE4C-214ENST00000599188 MTHFSP49914 203 aa16.06■□□□□ 0.16
PDE4C-214ENST00000599188 ERICH6Q7L0X2 663 aa16.06■□□□□ 0.16
PDE4C-214ENST00000599188 UBR1Q8IWV7 1749 aa16.05■□□□□ 0.16
PDE4C-214ENST00000599188 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
PDE4C-214ENST00000599188 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
PDE4C-214ENST00000599188 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
PDE4C-214ENST00000599188 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
PDE4C-214ENST00000599188 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
PDE4C-214ENST00000599188 A0A1W2PP64 1363 aa16.03■□□□□ 0.16
PDE4C-214ENST00000599188 ALKQ9UM73 1620 aa16.03■□□□□ 0.16
PDE4C-214ENST00000599188 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
PDE4C-214ENST00000599188 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
PDE4C-214ENST00000599188 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
PDE4C-214ENST00000599188 ATAD2Q6PL18 1390 aa16.02■□□□□ 0.16
PDE4C-214ENST00000599188 ABCC11Q96J66 1382 aa16.02■□□□□ 0.16
PDE4C-214ENST00000599188 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
PDE4C-214ENST00000599188 POGKQ9P215 609 aa16.02■□□□□ 0.16
PDE4C-214ENST00000599188 MINK1Q8N4C8 1332 aaPredicted RBP16.02■□□□□ 0.15
PDE4C-214ENST00000599188 MS4A1P11836 297 aa16.01■□□□□ 0.15
PDE4C-214ENST00000599188 LTKP29376 864 aa16.01■□□□□ 0.15
PDE4C-214ENST00000599188 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
PDE4C-214ENST00000599188 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
PDE4C-214ENST00000599188 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
PDE4C-214ENST00000599188 TCP11L2Q8N4U5 519 aa16■□□□□ 0.15
PDE4C-214ENST00000599188 BCAR3O75815 825 aa16■□□□□ 0.15
PDE4C-214ENST00000599188 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
PDE4C-214ENST00000599188 PDE4AP27815 886 aa15.98■□□□□ 0.15
PDE4C-214ENST00000599188 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
PDE4C-214ENST00000599188 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
PDE4C-214ENST00000599188 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
PDE4C-214ENST00000599188 CD163L1Q9NR16 1453 aa15.98■□□□□ 0.15
PDE4C-214ENST00000599188 CENPQQ7L2Z9 268 aaPredicted RBP15.98■□□□□ 0.15
PDE4C-214ENST00000599188 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
PDE4C-214ENST00000599188 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
PDE4C-214ENST00000599188 BACH2Q9BYV9 841 aa15.97■□□□□ 0.15
PDE4C-214ENST00000599188 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
PDE4C-214ENST00000599188 NOP58Q9Y2X3 529 aaKnown RBP15.97■□□□□ 0.15
PDE4C-214ENST00000599188 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
PDE4C-214ENST00000599188 IPO9Q96P70 1041 aaKnown RBP15.96■□□□□ 0.15
PDE4C-214ENST00000599188 RIMS2Q9UQ26 1411 aa15.95■□□□□ 0.14
PDE4C-214ENST00000599188 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
PDE4C-214ENST00000599188 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDE4C-214ENST00000599188 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
PDE4C-214ENST00000599188 SKAP1Q86WV1 359 aa15.95■□□□□ 0.14
PDE4C-214ENST00000599188 WDR63Q8IWG1 891 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms