RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 CDC42BPGQ6DT37 1551 aa17.38■□□□□ 0.37
ZNF548-209ENST00000598895 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
ZNF548-209ENST00000598895 BRINP3Q76B58 766 aa17.38■□□□□ 0.37
ZNF548-209ENST00000598895 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
ZNF548-209ENST00000598895 POGKQ9P215 609 aa17.37■□□□□ 0.37
ZNF548-209ENST00000598895 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
ZNF548-209ENST00000598895 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
ZNF548-209ENST00000598895 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
ZNF548-209ENST00000598895 ARHGEF28Q8N1W1 1705 aaKnown RBP17.35■□□□□ 0.37
ZNF548-209ENST00000598895 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
ZNF548-209ENST00000598895 COL16A1Q07092 1604 aaPredicted RBP17.35■□□□□ 0.37
ZNF548-209ENST00000598895 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
ZNF548-209ENST00000598895 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
ZNF548-209ENST00000598895 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
ZNF548-209ENST00000598895 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
ZNF548-209ENST00000598895 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
ZNF548-209ENST00000598895 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
ZNF548-209ENST00000598895 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
ZNF548-209ENST00000598895 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
ZNF548-209ENST00000598895 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
ZNF548-209ENST00000598895 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
ZNF548-209ENST00000598895 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
ZNF548-209ENST00000598895 RGPD8O14715 1765 aaPredicted RBP17.31■□□□□ 0.36
ZNF548-209ENST00000598895 ESCO1Q5FWF5 840 aa17.3■□□□□ 0.36
ZNF548-209ENST00000598895 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
ZNF548-209ENST00000598895 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
ZNF548-209ENST00000598895 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
ZNF548-209ENST00000598895 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
ZNF548-209ENST00000598895 JCADQ9P266 1359 aa17.26■□□□□ 0.35
ZNF548-209ENST00000598895 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
ZNF548-209ENST00000598895 SHPRHQ149N8 1683 aa17.24■□□□□ 0.35
ZNF548-209ENST00000598895 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
ZNF548-209ENST00000598895 FOXO3O43524 673 aa17.23■□□□□ 0.35
ZNF548-209ENST00000598895 KIF1AQ12756 1690 aa17.23■□□□□ 0.35
ZNF548-209ENST00000598895 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
ZNF548-209ENST00000598895 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
ZNF548-209ENST00000598895 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.35
ZNF548-209ENST00000598895 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.35
ZNF548-209ENST00000598895 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
ZNF548-209ENST00000598895 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
ZNF548-209ENST00000598895 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.34
ZNF548-209ENST00000598895 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
ZNF548-209ENST00000598895 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
ZNF548-209ENST00000598895 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
ZNF548-209ENST00000598895 NPHP3Q7Z494 1330 aa17.2■□□□□ 0.34
ZNF548-209ENST00000598895 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
ZNF548-209ENST00000598895 LRP6O75581 1613 aa17.19■□□□□ 0.34
ZNF548-209ENST00000598895 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
ZNF548-209ENST00000598895 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
ZNF548-209ENST00000598895 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
ZNF548-209ENST00000598895 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
ZNF548-209ENST00000598895 PXDNQ92626 1479 aa17.18■□□□□ 0.34
ZNF548-209ENST00000598895 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
ZNF548-209ENST00000598895 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
ZNF548-209ENST00000598895 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
ZNF548-209ENST00000598895 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
ZNF548-209ENST00000598895 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
ZNF548-209ENST00000598895 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
ZNF548-209ENST00000598895 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
ZNF548-209ENST00000598895 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
ZNF548-209ENST00000598895 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
ZNF548-209ENST00000598895 ATP7BP35670 1465 aa17.15■□□□□ 0.34
ZNF548-209ENST00000598895 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
ZNF548-209ENST00000598895 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
ZNF548-209ENST00000598895 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.33
ZNF548-209ENST00000598895 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
ZNF548-209ENST00000598895 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
ZNF548-209ENST00000598895 PSME1Q06323 249 aa17.13■□□□□ 0.33
ZNF548-209ENST00000598895 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
ZNF548-209ENST00000598895 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
ZNF548-209ENST00000598895 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
ZNF548-209ENST00000598895 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
ZNF548-209ENST00000598895 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
ZNF548-209ENST00000598895 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
ZNF548-209ENST00000598895 RGS17Q9UGC6 210 aaPredicted RBP17.1■□□□□ 0.33
ZNF548-209ENST00000598895 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
ZNF548-209ENST00000598895 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
ZNF548-209ENST00000598895 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
ZNF548-209ENST00000598895 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
ZNF548-209ENST00000598895 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
ZNF548-209ENST00000598895 C8orf37Q96NL8 207 aa17.07■□□□□ 0.32
ZNF548-209ENST00000598895 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
ZNF548-209ENST00000598895 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
ZNF548-209ENST00000598895 ACEP12821 1306 aa17.05■□□□□ 0.32
ZNF548-209ENST00000598895 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
ZNF548-209ENST00000598895 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
ZNF548-209ENST00000598895 SBNO1A3KN83 1393 aa17.04■□□□□ 0.32
ZNF548-209ENST00000598895 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
ZNF548-209ENST00000598895 MARF1Q9Y4F3 1742 aaKnown RBP17.04■□□□□ 0.32
ZNF548-209ENST00000598895 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
ZNF548-209ENST00000598895 AFF2P51816 1311 aa17.03■□□□□ 0.32
ZNF548-209ENST00000598895 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
ZNF548-209ENST00000598895 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
ZNF548-209ENST00000598895 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
ZNF548-209ENST00000598895 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.32
ZNF548-209ENST00000598895 NGLY1Q96IV0 654 aa17.02■□□□□ 0.32
ZNF548-209ENST00000598895 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
ZNF548-209ENST00000598895 PLEKHG3A1L390 1219 aa17.01■□□□□ 0.31
ZNF548-209ENST00000598895 ARHGEF10O15013 1369 aa17.01■□□□□ 0.31
ZNF548-209ENST00000598895 USP47Q96K76 1375 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms