RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PLEKHH1Q9ULM0 1364 aa21.28■■□□□ 1
XRCC1-208ENST00000598422 MEX3CQ5U5Q3 659 aaKnown RBP21.27■■□□□ 1
XRCC1-208ENST00000598422 DDX17Q92841 729 aaKnown RBP21.26■□□□□ 0.99
XRCC1-208ENST00000598422 ORAI2Q96SN7 254 aa21.26■□□□□ 0.99
XRCC1-208ENST00000598422 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
XRCC1-208ENST00000598422 LRRC59Q96AG4 307 aaKnown RBP21.25■□□□□ 0.99
XRCC1-208ENST00000598422 SIRT1Q96EB6 747 aa21.25■□□□□ 0.99
XRCC1-208ENST00000598422 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
XRCC1-208ENST00000598422 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
XRCC1-208ENST00000598422 POGKQ9P215 609 aa21.24■□□□□ 0.99
XRCC1-208ENST00000598422 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
XRCC1-208ENST00000598422 NUTM2FA1L443 756 aa21.22■□□□□ 0.99
XRCC1-208ENST00000598422 SAFB2Q14151 953 aaKnown RBP eCLIP21.22■□□□□ 0.99
XRCC1-208ENST00000598422 NUTM2BA6NNL0 878 aaPredicted RBP21.21■□□□□ 0.99
XRCC1-208ENST00000598422 NUTM2EB1AL46 878 aaPredicted RBP21.21■□□□□ 0.99
XRCC1-208ENST00000598422 NUTM2AQ8IVF1 878 aaPredicted RBP21.21■□□□□ 0.99
XRCC1-208ENST00000598422 RGS17Q9UGC6 210 aaPredicted RBP21.21■□□□□ 0.99
XRCC1-208ENST00000598422 LRP6O75581 1613 aa21.2■□□□□ 0.98
XRCC1-208ENST00000598422 SHPRHQ149N8 1683 aa21.2■□□□□ 0.98
XRCC1-208ENST00000598422 NPHP3Q7Z494 1330 aa21.2■□□□□ 0.98
XRCC1-208ENST00000598422 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
XRCC1-208ENST00000598422 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
XRCC1-208ENST00000598422 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
XRCC1-208ENST00000598422 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
XRCC1-208ENST00000598422 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
XRCC1-208ENST00000598422 FOXO3O43524 673 aa21.14■□□□□ 0.97
XRCC1-208ENST00000598422 POTEAQ6S8J7 498 aa21.13■□□□□ 0.97
XRCC1-208ENST00000598422 XPCQ01831 940 aaPredicted RBP21.12■□□□□ 0.97
XRCC1-208ENST00000598422 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
XRCC1-208ENST00000598422 MINK1Q8N4C8 1332 aaPredicted RBP21.11■□□□□ 0.97
XRCC1-208ENST00000598422 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
XRCC1-208ENST00000598422 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
XRCC1-208ENST00000598422 FMN2Q9NZ56 1722 aa21.1■□□□□ 0.97
XRCC1-208ENST00000598422 TRIM26Q12899 539 aaPredicted RBP21.1■□□□□ 0.97
XRCC1-208ENST00000598422 PXDNQ92626 1479 aa21.09■□□□□ 0.97
XRCC1-208ENST00000598422 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
XRCC1-208ENST00000598422 PHF8Q9UPP1 1060 aa21.09■□□□□ 0.97
XRCC1-208ENST00000598422 ANKARQ7Z5J8 1434 aa21.09■□□□□ 0.97
XRCC1-208ENST00000598422 ADAMTS2O95450 1211 aa21.08■□□□□ 0.97
XRCC1-208ENST00000598422 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
XRCC1-208ENST00000598422 ADGRB2O60241 1585 aa21.07■□□□□ 0.96
XRCC1-208ENST00000598422 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
XRCC1-208ENST00000598422 KIF1AQ12756 1690 aa21.06■□□□□ 0.96
XRCC1-208ENST00000598422 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
XRCC1-208ENST00000598422 AFF2P51816 1311 aa21.05■□□□□ 0.96
XRCC1-208ENST00000598422 WASLO00401 505 aaPredicted RBP21.04■□□□□ 0.96
XRCC1-208ENST00000598422 KRT28Q7Z3Y7 464 aa21.04■□□□□ 0.96
XRCC1-208ENST00000598422 PSME1Q06323 249 aa21.03■□□□□ 0.96
XRCC1-208ENST00000598422 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
XRCC1-208ENST00000598422 NGLY1Q96IV0 654 aa21.02■□□□□ 0.96
XRCC1-208ENST00000598422 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
XRCC1-208ENST00000598422 PMFBP1Q8TBY8 1022 aa21.01■□□□□ 0.95
XRCC1-208ENST00000598422 SPATA31A3Q5VYP0 1347 aa21.01■□□□□ 0.95
XRCC1-208ENST00000598422 KIAA1210Q9ULL0 1709 aa21■□□□□ 0.95
XRCC1-208ENST00000598422 TNS3Q68CZ2 1445 aa20.99■□□□□ 0.95
XRCC1-208ENST00000598422 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
XRCC1-208ENST00000598422 COL22A1Q8NFW1 1626 aaPredicted RBP20.98■□□□□ 0.95
XRCC1-208ENST00000598422 RXRBP28702 533 aa20.98■□□□□ 0.95
XRCC1-208ENST00000598422 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
XRCC1-208ENST00000598422 PRR36Q9H6K5 1346 aa20.98■□□□□ 0.95
XRCC1-208ENST00000598422 ARHGEF28Q8N1W1 1705 aaKnown RBP20.98■□□□□ 0.95
XRCC1-208ENST00000598422 GPRASP1Q5JY77 1395 aa20.97■□□□□ 0.95
XRCC1-208ENST00000598422 SBNO1A3KN83 1393 aa20.97■□□□□ 0.95
XRCC1-208ENST00000598422 NGDNQ8NEJ9 315 aaKnown RBP20.96■□□□□ 0.95
XRCC1-208ENST00000598422 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
XRCC1-208ENST00000598422 ARHGEF10O15013 1369 aa20.96■□□□□ 0.95
XRCC1-208ENST00000598422 USP32Q8NFA0 1604 aa20.95■□□□□ 0.94
XRCC1-208ENST00000598422 ROCK2O75116 1388 aaKnown RBP20.95■□□□□ 0.94
XRCC1-208ENST00000598422 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
XRCC1-208ENST00000598422 CDK19Q9BWU1 502 aa20.94■□□□□ 0.94
XRCC1-208ENST00000598422 USP21Q9UK80 565 aa20.94■□□□□ 0.94
XRCC1-208ENST00000598422 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
XRCC1-208ENST00000598422 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
XRCC1-208ENST00000598422 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
XRCC1-208ENST00000598422 ATP7BP35670 1465 aa20.93■□□□□ 0.94
XRCC1-208ENST00000598422 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
XRCC1-208ENST00000598422 FNBP4Q8N3X1 1017 aaPredicted RBP20.91■□□□□ 0.94
XRCC1-208ENST00000598422 SRPK2P78362 688 aaKnown RBP20.9■□□□□ 0.94
XRCC1-208ENST00000598422 TRPC5Q9UL62 973 aaPredicted RBP20.9■□□□□ 0.94
XRCC1-208ENST00000598422 RGPD8O14715 1765 aaPredicted RBP20.89■□□□□ 0.93
XRCC1-208ENST00000598422 CDK12Q9NYV4 1490 aaPredicted RBP20.88■□□□□ 0.93
XRCC1-208ENST00000598422 PAK3O75914 559 aaPredicted RBP20.88■□□□□ 0.93
XRCC1-208ENST00000598422 CABLES1Q8TDN4 633 aa20.88■□□□□ 0.93
XRCC1-208ENST00000598422 CCDC61Q9Y6R9 512 aa20.88■□□□□ 0.93
XRCC1-208ENST00000598422 TRPM1Q7Z4N2 1603 aa20.86■□□□□ 0.93
XRCC1-208ENST00000598422 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
XRCC1-208ENST00000598422 RGS12O14924 1447 aa20.84■□□□□ 0.93
XRCC1-208ENST00000598422 ATRNO75882 1429 aa20.84■□□□□ 0.93
XRCC1-208ENST00000598422 ACEP12821 1306 aa20.83■□□□□ 0.93
XRCC1-208ENST00000598422 CABP2Q9NPB3 220 aa20.83■□□□□ 0.93
XRCC1-208ENST00000598422 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
XRCC1-208ENST00000598422 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
XRCC1-208ENST00000598422 CARD11Q9BXL7 1154 aa20.82■□□□□ 0.92
XRCC1-208ENST00000598422 POLR3AO14802 1390 aaPredicted RBP20.82■□□□□ 0.92
XRCC1-208ENST00000598422 BCL9LQ86UU0 1499 aa20.81■□□□□ 0.92
XRCC1-208ENST00000598422 PPIP5K1Q6PFW1 1433 aa20.81■□□□□ 0.92
XRCC1-208ENST00000598422 PLEKHG3A1L390 1219 aa20.81■□□□□ 0.92
XRCC1-208ENST00000598422 UNC5CLQ8IV45 518 aa20.81■□□□□ 0.92
XRCC1-208ENST00000598422 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
XRCC1-208ENST00000598422 TRPM3Q9HCF6 1732 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms