RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 DIAPH1O60610 1272 aaKnown RBP15.68■□□□□ 0.1
USHBP1-207ENST00000597928 IDI1Q13907 227 aa15.68■□□□□ 0.1
USHBP1-207ENST00000597928 RRS1Q15050 365 aaKnown RBP15.67■□□□□ 0.1
USHBP1-207ENST00000597928 HSCBQ8IWL3 235 aa15.67■□□□□ 0.1
USHBP1-207ENST00000597928 SSH1Q8WYL5 1049 aa15.67■□□□□ 0.1
USHBP1-207ENST00000597928 FOXD4L6Q3SYB3 417 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-207ENST00000597928 FOXD4L3Q6VB84 417 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-207ENST00000597928 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-207ENST00000597928 COL17A1Q9UMD9 1497 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-207ENST00000597928 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
USHBP1-207ENST00000597928 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
USHBP1-207ENST00000597928 TXNDC2Q86VQ3 553 aa15.65■□□□□ 0.1
USHBP1-207ENST00000597928 ERCC6L2Q5T890 1561 aa15.65■□□□□ 0.1
USHBP1-207ENST00000597928 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
USHBP1-207ENST00000597928 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
USHBP1-207ENST00000597928 NCKAP5LQ9HCH0 1330 aa15.65■□□□□ 0.1
USHBP1-207ENST00000597928 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
USHBP1-207ENST00000597928 SCAF11Q99590 1463 aaKnown RBP15.64■□□□□ 0.09
USHBP1-207ENST00000597928 CDK19Q9BWU1 502 aa15.64■□□□□ 0.09
USHBP1-207ENST00000597928 UGGT1Q9NYU2 1555 aa15.63■□□□□ 0.09
USHBP1-207ENST00000597928 PDE3AQ14432 1141 aa15.63■□□□□ 0.09
USHBP1-207ENST00000597928 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
USHBP1-207ENST00000597928 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
USHBP1-207ENST00000597928 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
USHBP1-207ENST00000597928 MIS18AQ9NYP9 233 aa15.62■□□□□ 0.09
USHBP1-207ENST00000597928 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
USHBP1-207ENST00000597928 PLCH2O75038 1416 aa15.62■□□□□ 0.09
USHBP1-207ENST00000597928 ARHGEF12Q9NZN5 1544 aa15.62■□□□□ 0.09
USHBP1-207ENST00000597928 IPO8O15397 1037 aaKnown RBP15.61■□□□□ 0.09
USHBP1-207ENST00000597928 SAMD9LQ8IVG5 1584 aa15.61■□□□□ 0.09
USHBP1-207ENST00000597928 FAM83GA6ND36 823 aa15.61■□□□□ 0.09
USHBP1-207ENST00000597928 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
USHBP1-207ENST00000597928 TRIM27P14373 513 aa15.61■□□□□ 0.09
USHBP1-207ENST00000597928 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
USHBP1-207ENST00000597928 FANCAO15360 1455 aa15.6■□□□□ 0.09
USHBP1-207ENST00000597928 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
USHBP1-207ENST00000597928 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
USHBP1-207ENST00000597928 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
USHBP1-207ENST00000597928 NAP1L5Q96NT1 182 aaPredicted RBP15.6■□□□□ 0.09
USHBP1-207ENST00000597928 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 NME9Q86XW9 330 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.57■□□□□ 0.08
USHBP1-207ENST00000597928 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 TBC1D2Q9BYX2 928 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 TTC37Q6PGP7 1564 aa15.57■□□□□ 0.08
USHBP1-207ENST00000597928 C14orf93Q9H972 538 aaKnown RBP15.56■□□□□ 0.08
USHBP1-207ENST00000597928 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
USHBP1-207ENST00000597928 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
USHBP1-207ENST00000597928 KRT24Q2M2I5 525 aa15.55■□□□□ 0.08
USHBP1-207ENST00000597928 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
USHBP1-207ENST00000597928 ABCA8O94911 1581 aa15.55■□□□□ 0.08
USHBP1-207ENST00000597928 KDM5DQ9BY66 1539 aa15.54■□□□□ 0.08
USHBP1-207ENST00000597928 ARID3AQ99856 593 aa15.54■□□□□ 0.08
USHBP1-207ENST00000597928 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
USHBP1-207ENST00000597928 FYB1O15117 783 aa15.54■□□□□ 0.08
USHBP1-207ENST00000597928 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
USHBP1-207ENST00000597928 WDR7Q9Y4E6 1490 aa15.53■□□□□ 0.08
USHBP1-207ENST00000597928 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
USHBP1-207ENST00000597928 DUOX2Q9NRD8 1548 aa15.53■□□□□ 0.08
USHBP1-207ENST00000597928 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-207ENST00000597928 COG3Q96JB2 828 aa15.53■□□□□ 0.08
USHBP1-207ENST00000597928 PHACTR3Q96KR7 559 aa15.53■□□□□ 0.08
USHBP1-207ENST00000597928 GOLGA6L3A6NEY3 463 aa15.52■□□□□ 0.08
USHBP1-207ENST00000597928 BLMP54132 1417 aaPredicted RBP15.52■□□□□ 0.08
USHBP1-207ENST00000597928 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.08
USHBP1-207ENST00000597928 MCM10Q7L590 875 aa15.52■□□□□ 0.07
USHBP1-207ENST00000597928 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.07
USHBP1-207ENST00000597928 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
USHBP1-207ENST00000597928 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
USHBP1-207ENST00000597928 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
USHBP1-207ENST00000597928 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
USHBP1-207ENST00000597928 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
USHBP1-207ENST00000597928 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
USHBP1-207ENST00000597928 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
USHBP1-207ENST00000597928 TWISTNBQ3B726 338 aaPredicted RBP15.5■□□□□ 0.07
USHBP1-207ENST00000597928 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
USHBP1-207ENST00000597928 CD109Q6YHK3 1445 aa15.49■□□□□ 0.07
USHBP1-207ENST00000597928 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
USHBP1-207ENST00000597928 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
USHBP1-207ENST00000597928 TSHZ3Q63HK5 1081 aa15.48■□□□□ 0.07
USHBP1-207ENST00000597928 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
USHBP1-207ENST00000597928 ATP10AO60312 1499 aa15.48■□□□□ 0.07
USHBP1-207ENST00000597928 ANP32BQ92688 251 aaKnown RBP15.47■□□□□ 0.07
USHBP1-207ENST00000597928 RILPL2Q969X0 211 aa15.47■□□□□ 0.07
USHBP1-207ENST00000597928 AMPHP49418 695 aa15.47■□□□□ 0.07
USHBP1-207ENST00000597928 C16orf71Q8IYS4 520 aaPredicted RBP15.46■□□□□ 0.07
USHBP1-207ENST00000597928 PANK2Q9BZ23 570 aa15.46■□□□□ 0.07
USHBP1-207ENST00000597928 ASXL2Q76L83 1435 aa15.46■□□□□ 0.07
USHBP1-207ENST00000597928 TRAK2O60296 914 aa15.46■□□□□ 0.07
USHBP1-207ENST00000597928 EIF2S2P20042 333 aaKnown RBP15.46■□□□□ 0.07
USHBP1-207ENST00000597928 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
USHBP1-207ENST00000597928 F6X3S4 739 aa15.45■□□□□ 0.06
USHBP1-207ENST00000597928 CHD1LQ86WJ1 897 aa15.45■□□□□ 0.06
USHBP1-207ENST00000597928 DTNBO60941 627 aa15.45■□□□□ 0.06
USHBP1-207ENST00000597928 MPNDQ8N594 471 aa15.45■□□□□ 0.06
USHBP1-207ENST00000597928 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
USHBP1-207ENST00000597928 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms