RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 SAFB2Q14151 953 aaKnown RBP eCLIP29.26■■■□□ 2.27
IRF3-214ENST00000596788 DISP3Q9P2K9 1392 aa29.24■■■□□ 2.27
IRF3-214ENST00000596788 ZNF335Q9H4Z2 1342 aaPredicted RBP29.22■■■□□ 2.27
IRF3-214ENST00000596788 MINK1Q8N4C8 1332 aaPredicted RBP29.2■■■□□ 2.27
IRF3-214ENST00000596788 XIRP1Q702N8 1843 aaKnown RBP29.2■■■□□ 2.27
IRF3-214ENST00000596788 C11orf95C9JLR9 678 aaPredicted RBP29.2■■■□□ 2.26
IRF3-214ENST00000596788 TMF1P82094 1093 aa29.16■■■□□ 2.26
IRF3-214ENST00000596788 CCDC7Q96M83 1385 aa29.15■■■□□ 2.26
IRF3-214ENST00000596788 ADGRL3Q9HAR2 1447 aa29.15■■■□□ 2.26
IRF3-214ENST00000596788 KIF7Q2M1P5 1343 aa29.15■■■□□ 2.26
IRF3-214ENST00000596788 WASHC2AQ641Q2 1341 aa29.15■■■□□ 2.26
IRF3-214ENST00000596788 LRRC7Q96NW7 1537 aa29.15■■■□□ 2.26
IRF3-214ENST00000596788 CDC42BPGQ6DT37 1551 aa29.14■■■□□ 2.26
IRF3-214ENST00000596788 MYOM1P52179 1685 aa29.13■■■□□ 2.25
IRF3-214ENST00000596788 RBM33Q96EV2 1170 aaKnown RBP29.13■■■□□ 2.25
IRF3-214ENST00000596788 LTBP4Q8N2S1 1624 aa29.12■■■□□ 2.25
IRF3-214ENST00000596788 FMN2Q9NZ56 1722 aa29.12■■■□□ 2.25
IRF3-214ENST00000596788 PROSER2Q86WR7 435 aaPredicted RBP29.12■■■□□ 2.25
IRF3-214ENST00000596788 EVC2Q86UK5 1308 aa29.11■■■□□ 2.25
IRF3-214ENST00000596788 TMEM94Q12767 1356 aa29.11■■■□□ 2.25
IRF3-214ENST00000596788 SLC24A1O60721 1099 aa29.1■■■□□ 2.25
IRF3-214ENST00000596788 NCOA3Q9Y6Q9 1424 aa29.07■■■□□ 2.24
IRF3-214ENST00000596788 USP32Q8NFA0 1604 aa29.06■■■□□ 2.24
IRF3-214ENST00000596788 WASLO00401 505 aaPredicted RBP29.05■■■□□ 2.24
IRF3-214ENST00000596788 TOPAZ1Q8N9V7 1692 aa29.05■■■□□ 2.24
IRF3-214ENST00000596788 POLR3GLQ9BT43 218 aa29.04■■■□□ 2.24
IRF3-214ENST00000596788 CDK19Q9BWU1 502 aa29.04■■■□□ 2.24
IRF3-214ENST00000596788 CDCA8Q53HL2 280 aa29.03■■■□□ 2.24
IRF3-214ENST00000596788 ATP7BP35670 1465 aa29.03■■■□□ 2.24
IRF3-214ENST00000596788 CABP2Q9NPB3 220 aa29.02■■■□□ 2.24
IRF3-214ENST00000596788 RGPD8O14715 1765 aaPredicted RBP29.01■■■□□ 2.23
IRF3-214ENST00000596788 ITSN1Q15811 1721 aa29.01■■■□□ 2.23
IRF3-214ENST00000596788 SRPK2P78362 688 aaKnown RBP29.01■■■□□ 2.23
IRF3-214ENST00000596788 C14orf37Q86TY3 774 aa29.01■■■□□ 2.23
IRF3-214ENST00000596788 PUS7Q96PZ0 661 aaKnown RBP28.99■■■□□ 2.23
IRF3-214ENST00000596788 DCCP43146 1447 aa28.99■■■□□ 2.23
IRF3-214ENST00000596788 ATAD2Q6PL18 1390 aa28.99■■■□□ 2.23
IRF3-214ENST00000596788 PRR36Q9H6K5 1346 aa28.96■■■□□ 2.23
IRF3-214ENST00000596788 ANKARQ7Z5J8 1434 aa28.95■■■□□ 2.23
IRF3-214ENST00000596788 MSH6P52701 1360 aa28.95■■■□□ 2.22
IRF3-214ENST00000596788 C19orf44Q9H6X5 657 aa28.94■■■□□ 2.22
IRF3-214ENST00000596788 NUDT16Q96DE0 195 aaKnown RBP28.91■■■□□ 2.22
IRF3-214ENST00000596788 NUTM2FA1L443 756 aa28.9■■■□□ 2.22
IRF3-214ENST00000596788 DDX10Q13206 875 aaKnown RBP28.9■■■□□ 2.22
IRF3-214ENST00000596788 NINLQ9Y2I6 1382 aa28.89■■■□□ 2.22
IRF3-214ENST00000596788 MST1RQ04912 1400 aa28.89■■■□□ 2.22
IRF3-214ENST00000596788 PPIP5K1Q6PFW1 1433 aa28.89■■■□□ 2.22
IRF3-214ENST00000596788 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
IRF3-214ENST00000596788 CD163L1Q9NR16 1453 aa28.86■■■□□ 2.21
IRF3-214ENST00000596788 ATF3P18847 181 aa28.85■■■□□ 2.21
IRF3-214ENST00000596788 TMC1Q8TDI8 760 aa28.85■■■□□ 2.21
IRF3-214ENST00000596788 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
IRF3-214ENST00000596788 C1orf167Q5SNV9 1468 aa28.85■■■□□ 2.21
IRF3-214ENST00000596788 MON2Q7Z3U7 1717 aa28.84■■■□□ 2.21
IRF3-214ENST00000596788 CCDC61Q9Y6R9 512 aa28.84■■■□□ 2.21
IRF3-214ENST00000596788 CADPS2Q86UW7 1296 aa28.83■■■□□ 2.21
IRF3-214ENST00000596788 KIF1AQ12756 1690 aa28.83■■■□□ 2.21
IRF3-214ENST00000596788 CABP1Q9NZU7 370 aa28.82■■■□□ 2.2
IRF3-214ENST00000596788 ANKRD36BQ8N2N9 1353 aa28.81■■■□□ 2.2
IRF3-214ENST00000596788 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
IRF3-214ENST00000596788 PANK3Q9H999 370 aa28.79■■■□□ 2.2
IRF3-214ENST00000596788 NRKQ7Z2Y5 1582 aa28.78■■■□□ 2.2
IRF3-214ENST00000596788 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
IRF3-214ENST00000596788 CPSF1Q10570 1443 aaKnown RBP28.77■■■□□ 2.2
IRF3-214ENST00000596788 PLEKHG3A1L390 1219 aa28.76■■■□□ 2.19
IRF3-214ENST00000596788 POLR3AO14802 1390 aaPredicted RBP28.75■■■□□ 2.19
IRF3-214ENST00000596788 PMFBP1Q8TBY8 1022 aa28.73■■■□□ 2.19
IRF3-214ENST00000596788 TERF2IPQ9NYB0 399 aa28.73■■■□□ 2.19
IRF3-214ENST00000596788 ACEP12821 1306 aa28.72■■■□□ 2.19
IRF3-214ENST00000596788 NSD3Q9BZ95 1437 aa28.72■■■□□ 2.19
IRF3-214ENST00000596788 ESCO1Q5FWF5 840 aa28.72■■■□□ 2.19
IRF3-214ENST00000596788 ORAI2Q96SN7 254 aa28.72■■■□□ 2.19
IRF3-214ENST00000596788 PHF8Q9UPP1 1060 aa28.72■■■□□ 2.19
IRF3-214ENST00000596788 CARD14Q9BXL6 1004 aa28.71■■■□□ 2.19
IRF3-214ENST00000596788 HDGFL2Q7Z4V5 671 aaPredicted RBP28.7■■■□□ 2.18
IRF3-214ENST00000596788 KIF20BQ96Q89 1820 aa28.7■■■□□ 2.18
IRF3-214ENST00000596788 DIEXFQ68CQ4 756 aaKnown RBP28.69■■■□□ 2.18
IRF3-214ENST00000596788 KTN1Q86UP2 1357 aaKnown RBP28.69■■■□□ 2.18
IRF3-214ENST00000596788 USP6P35125 1406 aa28.69■■■□□ 2.18
IRF3-214ENST00000596788 PER1O15534 1290 aaPredicted RBP28.68■■■□□ 2.18
IRF3-214ENST00000596788 SLAIN2Q9P270 581 aa28.68■■■□□ 2.18
IRF3-214ENST00000596788 ROBO1Q9Y6N7 1651 aa28.67■■■□□ 2.18
IRF3-214ENST00000596788 NGDNQ8NEJ9 315 aaKnown RBP28.66■■■□□ 2.18
IRF3-214ENST00000596788 EDC4Q6P2E9 1401 aaKnown RBP28.66■■■□□ 2.18
IRF3-214ENST00000596788 TRPM3Q9HCF6 1732 aaPredicted RBP28.66■■■□□ 2.18
IRF3-214ENST00000596788 NHSL1Q5SYE7 1610 aa28.65■■■□□ 2.18
IRF3-214ENST00000596788 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
IRF3-214ENST00000596788 BRINP3Q76B58 766 aa28.64■■■□□ 2.18
IRF3-214ENST00000596788 ANKRD26Q9UPS8 1709 aa28.63■■■□□ 2.17
IRF3-214ENST00000596788 SSH2Q76I76 1423 aa28.63■■■□□ 2.17
IRF3-214ENST00000596788 ZNF692Q9BU19 519 aaPredicted RBP28.62■■■□□ 2.17
IRF3-214ENST00000596788 KNSTRNQ9Y448 316 aa28.61■■■□□ 2.17
IRF3-214ENST00000596788 PIK3C2AO00443 1686 aa28.6■■■□□ 2.17
IRF3-214ENST00000596788 AMER1Q5JTC6 1135 aaPredicted RBP28.59■■■□□ 2.17
IRF3-214ENST00000596788 PXDNQ92626 1479 aa28.59■■■□□ 2.17
IRF3-214ENST00000596788 FOXO3O43524 673 aa28.58■■■□□ 2.17
IRF3-214ENST00000596788 NPC1L1Q9UHC9 1359 aa28.57■■■□□ 2.16
IRF3-214ENST00000596788 CGNL1Q0VF96 1302 aa28.56■■■□□ 2.16
IRF3-214ENST00000596788 MARF1Q9Y4F3 1742 aaKnown RBP28.55■■■□□ 2.16
IRF3-214ENST00000596788 USP54Q70EL1 1684 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms