RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 NUTM2FA1L443 756 aa22.12■■□□□ 1.13
USE1-206ENST00000595101 BRINP3Q76B58 766 aa22.12■■□□□ 1.13
USE1-206ENST00000595101 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
USE1-206ENST00000595101 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
USE1-206ENST00000595101 POGKQ9P215 609 aa22.1■■□□□ 1.13
USE1-206ENST00000595101 DDX17Q92841 729 aaKnown RBP22.09■■□□□ 1.13
USE1-206ENST00000595101 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
USE1-206ENST00000595101 HIRIP3Q9BW71 556 aaPredicted RBP22.09■■□□□ 1.13
USE1-206ENST00000595101 DLC1Q96QB1 1528 aa22.07■■□□□ 1.12
USE1-206ENST00000595101 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
USE1-206ENST00000595101 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
USE1-206ENST00000595101 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
USE1-206ENST00000595101 KIAA1210Q9ULL0 1709 aa22.03■■□□□ 1.12
USE1-206ENST00000595101 CDC42BPGQ6DT37 1551 aa22.02■■□□□ 1.11
USE1-206ENST00000595101 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
USE1-206ENST00000595101 ESCO1Q5FWF5 840 aa22.01■■□□□ 1.11
USE1-206ENST00000595101 TRPM1Q7Z4N2 1603 aa22■■□□□ 1.11
USE1-206ENST00000595101 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
USE1-206ENST00000595101 ARHGEF28Q8N1W1 1705 aaKnown RBP21.99■■□□□ 1.11
USE1-206ENST00000595101 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
USE1-206ENST00000595101 PHLPP1O60346 1717 aa21.95■■□□□ 1.1
USE1-206ENST00000595101 FOXO3O43524 673 aa21.94■■□□□ 1.1
USE1-206ENST00000595101 PRR36Q9H6K5 1346 aa21.94■■□□□ 1.1
USE1-206ENST00000595101 XPCQ01831 940 aaPredicted RBP21.94■■□□□ 1.1
USE1-206ENST00000595101 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
USE1-206ENST00000595101 AHDC1Q5TGY3 1603 aaPredicted RBP21.94■■□□□ 1.1
USE1-206ENST00000595101 GPRASP1Q5JY77 1395 aa21.93■■□□□ 1.1
USE1-206ENST00000595101 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
USE1-206ENST00000595101 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
USE1-206ENST00000595101 FMN2Q9NZ56 1722 aa21.93■■□□□ 1.1
USE1-206ENST00000595101 ADGRB2O60241 1585 aa21.91■■□□□ 1.1
USE1-206ENST00000595101 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
USE1-206ENST00000595101 RALGAPBQ86X10 1494 aa21.91■■□□□ 1.1
USE1-206ENST00000595101 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
USE1-206ENST00000595101 SOS2Q07890 1332 aaPredicted RBP21.88■■□□□ 1.09
USE1-206ENST00000595101 PHF8Q9UPP1 1060 aa21.88■■□□□ 1.09
USE1-206ENST00000595101 NHSL1Q5SYE7 1610 aa21.88■■□□□ 1.09
USE1-206ENST00000595101 USP32Q8NFA0 1604 aa21.88■■□□□ 1.09
USE1-206ENST00000595101 JCADQ9P266 1359 aa21.87■■□□□ 1.09
USE1-206ENST00000595101 TIMELESSQ9UNS1 1208 aa21.87■■□□□ 1.09
USE1-206ENST00000595101 RGPD8O14715 1765 aaPredicted RBP21.86■■□□□ 1.09
USE1-206ENST00000595101 NUDT16Q96DE0 195 aaKnown RBP21.86■■□□□ 1.09
USE1-206ENST00000595101 LRRC59Q96AG4 307 aaKnown RBP21.85■■□□□ 1.09
USE1-206ENST00000595101 CABP2Q9NPB3 220 aa21.85■■□□□ 1.09
USE1-206ENST00000595101 NPHP3Q7Z494 1330 aa21.85■■□□□ 1.09
USE1-206ENST00000595101 ANKARQ7Z5J8 1434 aa21.85■■□□□ 1.09
USE1-206ENST00000595101 TULP4Q9NRJ4 1543 aa21.84■■□□□ 1.09
USE1-206ENST00000595101 DISP3Q9P2K9 1392 aa21.83■■□□□ 1.09
USE1-206ENST00000595101 ATP7BP35670 1465 aa21.83■■□□□ 1.08
USE1-206ENST00000595101 PXDNQ92626 1479 aa21.83■■□□□ 1.08
USE1-206ENST00000595101 MED1Q15648 1581 aaPredicted RBP21.82■■□□□ 1.08
USE1-206ENST00000595101 SRPK2P78362 688 aaKnown RBP21.82■■□□□ 1.08
USE1-206ENST00000595101 KRT28Q7Z3Y7 464 aa21.82■■□□□ 1.08
USE1-206ENST00000595101 QRICH2Q9H0J4 1663 aa21.81■■□□□ 1.08
USE1-206ENST00000595101 EIF3AQ14152 1382 aaKnown RBP21.81■■□□□ 1.08
USE1-206ENST00000595101 NUTM2BA6NNL0 878 aaPredicted RBP21.8■■□□□ 1.08
USE1-206ENST00000595101 NUTM2EB1AL46 878 aaPredicted RBP21.8■■□□□ 1.08
USE1-206ENST00000595101 NUTM2AQ8IVF1 878 aaPredicted RBP21.8■■□□□ 1.08
USE1-206ENST00000595101 PNPLA6Q8IY17 1366 aa21.8■■□□□ 1.08
USE1-206ENST00000595101 ST20-MTHFSA0A0A6YYL1 179 aa21.79■■□□□ 1.08
USE1-206ENST00000595101 LRP6O75581 1613 aa21.78■■□□□ 1.08
USE1-206ENST00000595101 PSME1Q06323 249 aa21.78■■□□□ 1.08
USE1-206ENST00000595101 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
USE1-206ENST00000595101 NGDNQ8NEJ9 315 aaKnown RBP21.76■■□□□ 1.07
USE1-206ENST00000595101 SPATA31A6Q5VVP1 1343 aa21.76■■□□□ 1.07
USE1-206ENST00000595101 EVC2Q86UK5 1308 aa21.76■■□□□ 1.07
USE1-206ENST00000595101 KIF1AQ12756 1690 aa21.75■■□□□ 1.07
USE1-206ENST00000595101 SPATA31A3Q5VYP0 1347 aa21.75■■□□□ 1.07
USE1-206ENST00000595101 TESK2Q96S53 571 aa21.74■■□□□ 1.07
USE1-206ENST00000595101 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
USE1-206ENST00000595101 SHPRHQ149N8 1683 aa21.74■■□□□ 1.07
USE1-206ENST00000595101 PLEKHG5O94827 1062 aa21.74■■□□□ 1.07
USE1-206ENST00000595101 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
USE1-206ENST00000595101 ACEP12821 1306 aa21.73■■□□□ 1.07
USE1-206ENST00000595101 USP47Q96K76 1375 aa21.73■■□□□ 1.07
USE1-206ENST00000595101 PLEKHG3A1L390 1219 aa21.72■■□□□ 1.07
USE1-206ENST00000595101 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
USE1-206ENST00000595101 LMOD2Q6P5Q4 547 aa21.71■■□□□ 1.07
USE1-206ENST00000595101 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
USE1-206ENST00000595101 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
USE1-206ENST00000595101 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
USE1-206ENST00000595101 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
USE1-206ENST00000595101 CABLES1Q8TDN4 633 aa21.69■■□□□ 1.06
USE1-206ENST00000595101 POLR3AO14802 1390 aaPredicted RBP21.69■■□□□ 1.06
USE1-206ENST00000595101 MEX3CQ5U5Q3 659 aaKnown RBP21.69■■□□□ 1.06
USE1-206ENST00000595101 TOPAZ1Q8N9V7 1692 aa21.69■■□□□ 1.06
USE1-206ENST00000595101 SBNO1A3KN83 1393 aa21.68■■□□□ 1.06
USE1-206ENST00000595101 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
USE1-206ENST00000595101 TNS3Q68CZ2 1445 aa21.68■■□□□ 1.06
USE1-206ENST00000595101 C8orf37Q96NL8 207 aa21.65■■□□□ 1.06
USE1-206ENST00000595101 ITSN1Q15811 1721 aa21.64■■□□□ 1.05
USE1-206ENST00000595101 NUTM2GQ5VZR2 741 aa21.64■■□□□ 1.05
USE1-206ENST00000595101 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
USE1-206ENST00000595101 POTEAQ6S8J7 498 aa21.63■■□□□ 1.05
USE1-206ENST00000595101 SLC12A5Q9H2X9 1139 aa21.62■■□□□ 1.05
USE1-206ENST00000595101 COL22A1Q8NFW1 1626 aaPredicted RBP21.62■■□□□ 1.05
USE1-206ENST00000595101 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
USE1-206ENST00000595101 TMC1Q8TDI8 760 aa21.61■■□□□ 1.05
USE1-206ENST00000595101 ARHGEF10O15013 1369 aa21.59■■□□□ 1.05
USE1-206ENST00000595101 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms