RNA–Protein interactions for RNA: ENST00000594261.5

LINC01872-201, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 5 BASIC

Gene LINC01872, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-201ENST00000594261 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
LINC01872-201ENST00000594261 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
LINC01872-201ENST00000594261 CDC42BPGQ6DT37 1551 aa16.31■□□□□ 0.2
LINC01872-201ENST00000594261 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
LINC01872-201ENST00000594261 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
LINC01872-201ENST00000594261 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
LINC01872-201ENST00000594261 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
LINC01872-201ENST00000594261 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
LINC01872-201ENST00000594261 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
LINC01872-201ENST00000594261 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
LINC01872-201ENST00000594261 NEUROD1Q13562 356 aa16.29■□□□□ 0.2
LINC01872-201ENST00000594261 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
LINC01872-201ENST00000594261 POGKQ9P215 609 aa16.28■□□□□ 0.2
LINC01872-201ENST00000594261 DLC1Q96QB1 1528 aa16.28■□□□□ 0.2
LINC01872-201ENST00000594261 KIAA1210Q9ULL0 1709 aa16.28■□□□□ 0.2
LINC01872-201ENST00000594261 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
LINC01872-201ENST00000594261 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC01872-201ENST00000594261 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
LINC01872-201ENST00000594261 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
LINC01872-201ENST00000594261 JCADQ9P266 1359 aa16.26■□□□□ 0.19
LINC01872-201ENST00000594261 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
LINC01872-201ENST00000594261 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
LINC01872-201ENST00000594261 NUTM2FA1L443 756 aa16.24■□□□□ 0.19
LINC01872-201ENST00000594261 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
LINC01872-201ENST00000594261 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
LINC01872-201ENST00000594261 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
LINC01872-201ENST00000594261 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
LINC01872-201ENST00000594261 DDX17Q92841 729 aaKnown RBP16.22■□□□□ 0.19
LINC01872-201ENST00000594261 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
LINC01872-201ENST00000594261 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
LINC01872-201ENST00000594261 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
LINC01872-201ENST00000594261 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
LINC01872-201ENST00000594261 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
LINC01872-201ENST00000594261 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
LINC01872-201ENST00000594261 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
LINC01872-201ENST00000594261 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
LINC01872-201ENST00000594261 HIRIP3Q9BW71 556 aaPredicted RBP16.18■□□□□ 0.18
LINC01872-201ENST00000594261 PCGF6Q9BYE7 350 aa16.18■□□□□ 0.18
LINC01872-201ENST00000594261 NPHP3Q7Z494 1330 aa16.18■□□□□ 0.18
LINC01872-201ENST00000594261 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
LINC01872-201ENST00000594261 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
LINC01872-201ENST00000594261 SOS2Q07890 1332 aaPredicted RBP16.17■□□□□ 0.18
LINC01872-201ENST00000594261 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
LINC01872-201ENST00000594261 FOXO3O43524 673 aa16.16■□□□□ 0.18
LINC01872-201ENST00000594261 ILDR2Q71H61 639 aa16.16■□□□□ 0.18
LINC01872-201ENST00000594261 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
LINC01872-201ENST00000594261 MEX3CQ5U5Q3 659 aaKnown RBP16.15■□□□□ 0.18
LINC01872-201ENST00000594261 ANKARQ7Z5J8 1434 aa16.14■□□□□ 0.17
LINC01872-201ENST00000594261 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
LINC01872-201ENST00000594261 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
LINC01872-201ENST00000594261 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
LINC01872-201ENST00000594261 LRP6O75581 1613 aa16.14■□□□□ 0.17
LINC01872-201ENST00000594261 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
LINC01872-201ENST00000594261 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
LINC01872-201ENST00000594261 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
LINC01872-201ENST00000594261 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
LINC01872-201ENST00000594261 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
LINC01872-201ENST00000594261 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
LINC01872-201ENST00000594261 PXDNQ92626 1479 aa16.12■□□□□ 0.17
LINC01872-201ENST00000594261 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
LINC01872-201ENST00000594261 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
LINC01872-201ENST00000594261 QRICH2Q9H0J4 1663 aa16.1■□□□□ 0.17
LINC01872-201ENST00000594261 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
LINC01872-201ENST00000594261 ITSN1Q15811 1721 aa16.1■□□□□ 0.17
LINC01872-201ENST00000594261 NBPF8Q3BBV2 869 aa16.09■□□□□ 0.17
LINC01872-201ENST00000594261 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
LINC01872-201ENST00000594261 RGS17Q9UGC6 210 aaPredicted RBP16.09■□□□□ 0.17
LINC01872-201ENST00000594261 KRT28Q7Z3Y7 464 aa16.08■□□□□ 0.16
LINC01872-201ENST00000594261 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
LINC01872-201ENST00000594261 PRR36Q9H6K5 1346 aa16.08■□□□□ 0.16
LINC01872-201ENST00000594261 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.16
LINC01872-201ENST00000594261 PSME1Q06323 249 aa16.07■□□□□ 0.16
LINC01872-201ENST00000594261 ATP7BP35670 1465 aa16.06■□□□□ 0.16
LINC01872-201ENST00000594261 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
LINC01872-201ENST00000594261 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
LINC01872-201ENST00000594261 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
LINC01872-201ENST00000594261 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
LINC01872-201ENST00000594261 SPATA31A3Q5VYP0 1347 aa16.04■□□□□ 0.16
LINC01872-201ENST00000594261 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
LINC01872-201ENST00000594261 ZNF772Q68DY9 489 aaPredicted RBP16.04■□□□□ 0.16
LINC01872-201ENST00000594261 NGDNQ8NEJ9 315 aaKnown RBP16.04■□□□□ 0.16
LINC01872-201ENST00000594261 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
LINC01872-201ENST00000594261 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
LINC01872-201ENST00000594261 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
LINC01872-201ENST00000594261 LMOD2Q6P5Q4 547 aa16.03■□□□□ 0.16
LINC01872-201ENST00000594261 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
LINC01872-201ENST00000594261 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
LINC01872-201ENST00000594261 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
LINC01872-201ENST00000594261 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
LINC01872-201ENST00000594261 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.16
LINC01872-201ENST00000594261 MARF1Q9Y4F3 1742 aaKnown RBP16.01■□□□□ 0.15
LINC01872-201ENST00000594261 AFF2P51816 1311 aa16■□□□□ 0.15
LINC01872-201ENST00000594261 TRPM3Q9HCF6 1732 aaPredicted RBP16■□□□□ 0.15
LINC01872-201ENST00000594261 SOCS7O14512 581 aa16■□□□□ 0.15
LINC01872-201ENST00000594261 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
LINC01872-201ENST00000594261 NGLY1Q96IV0 654 aa16■□□□□ 0.15
LINC01872-201ENST00000594261 CABP2Q9NPB3 220 aa16■□□□□ 0.15
LINC01872-201ENST00000594261 ARHGEF10O15013 1369 aa16■□□□□ 0.15
LINC01872-201ENST00000594261 EVC2Q86UK5 1308 aa15.99■□□□□ 0.15
LINC01872-201ENST00000594261 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms