RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 NALCNQ8IZF0 1738 aa18.73■□□□□ 0.59
DDX39A-218ENST00000592632 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.59
DDX39A-218ENST00000592632 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
DDX39A-218ENST00000592632 MST1RQ04912 1400 aa18.71■□□□□ 0.59
DDX39A-218ENST00000592632 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
DDX39A-218ENST00000592632 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
DDX39A-218ENST00000592632 POGKQ9P215 609 aa18.69■□□□□ 0.58
DDX39A-218ENST00000592632 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
DDX39A-218ENST00000592632 KIAA1210Q9ULL0 1709 aa18.69■□□□□ 0.58
DDX39A-218ENST00000592632 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDX39A-218ENST00000592632 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
DDX39A-218ENST00000592632 C1orf167Q5SNV9 1468 aa18.65■□□□□ 0.58
DDX39A-218ENST00000592632 ORAI2Q96SN7 254 aa18.64■□□□□ 0.57
DDX39A-218ENST00000592632 RGS17Q9UGC6 210 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-218ENST00000592632 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
DDX39A-218ENST00000592632 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
DDX39A-218ENST00000592632 CDC42BPGQ6DT37 1551 aa18.62■□□□□ 0.57
DDX39A-218ENST00000592632 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-218ENST00000592632 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
DDX39A-218ENST00000592632 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
DDX39A-218ENST00000592632 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-218ENST00000592632 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
DDX39A-218ENST00000592632 ESCO1Q5FWF5 840 aa18.59■□□□□ 0.57
DDX39A-218ENST00000592632 CCER1Q8TC90 406 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-218ENST00000592632 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
DDX39A-218ENST00000592632 JCADQ9P266 1359 aa18.58■□□□□ 0.57
DDX39A-218ENST00000592632 AHDC1Q5TGY3 1603 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-218ENST00000592632 WASLO00401 505 aaPredicted RBP18.57■□□□□ 0.56
DDX39A-218ENST00000592632 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
DDX39A-218ENST00000592632 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
DDX39A-218ENST00000592632 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
DDX39A-218ENST00000592632 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
DDX39A-218ENST00000592632 COL16A1Q07092 1604 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-218ENST00000592632 GPRASP1Q5JY77 1395 aa18.55■□□□□ 0.56
DDX39A-218ENST00000592632 NHSL1Q5SYE7 1610 aa18.54■□□□□ 0.56
DDX39A-218ENST00000592632 RGPD8O14715 1765 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-218ENST00000592632 ADGRB2O60241 1585 aa18.54■□□□□ 0.56
DDX39A-218ENST00000592632 CENPJQ9HC77 1338 aaPredicted RBP18.53■□□□□ 0.56
DDX39A-218ENST00000592632 FOXO3O43524 673 aa18.53■□□□□ 0.56
DDX39A-218ENST00000592632 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-218ENST00000592632 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
DDX39A-218ENST00000592632 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
DDX39A-218ENST00000592632 LRRC59Q96AG4 307 aaKnown RBP18.51■□□□□ 0.55
DDX39A-218ENST00000592632 CARD11Q9BXL7 1154 aa18.51■□□□□ 0.55
DDX39A-218ENST00000592632 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
DDX39A-218ENST00000592632 RALGAPBQ86X10 1494 aa18.51■□□□□ 0.55
DDX39A-218ENST00000592632 ANKARQ7Z5J8 1434 aa18.49■□□□□ 0.55
DDX39A-218ENST00000592632 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
DDX39A-218ENST00000592632 USP32Q8NFA0 1604 aa18.49■□□□□ 0.55
DDX39A-218ENST00000592632 SPATA31A6Q5VVP1 1343 aa18.49■□□□□ 0.55
DDX39A-218ENST00000592632 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
DDX39A-218ENST00000592632 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-218ENST00000592632 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
DDX39A-218ENST00000592632 PMFBP1Q8TBY8 1022 aa18.47■□□□□ 0.55
DDX39A-218ENST00000592632 LRP6O75581 1613 aa18.47■□□□□ 0.55
DDX39A-218ENST00000592632 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
DDX39A-218ENST00000592632 TULP4Q9NRJ4 1543 aa18.46■□□□□ 0.55
DDX39A-218ENST00000592632 KRT28Q7Z3Y7 464 aa18.46■□□□□ 0.55
DDX39A-218ENST00000592632 PXDNQ92626 1479 aa18.45■□□□□ 0.54
DDX39A-218ENST00000592632 QRICH2Q9H0J4 1663 aa18.44■□□□□ 0.54
DDX39A-218ENST00000592632 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
DDX39A-218ENST00000592632 CCDC61Q9Y6R9 512 aa18.43■□□□□ 0.54
DDX39A-218ENST00000592632 KIF1AQ12756 1690 aa18.43■□□□□ 0.54
DDX39A-218ENST00000592632 SHPRHQ149N8 1683 aa18.43■□□□□ 0.54
DDX39A-218ENST00000592632 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
DDX39A-218ENST00000592632 ATP7BP35670 1465 aa18.42■□□□□ 0.54
DDX39A-218ENST00000592632 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-218ENST00000592632 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-218ENST00000592632 PSME1Q06323 249 aa18.42■□□□□ 0.54
DDX39A-218ENST00000592632 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-218ENST00000592632 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
DDX39A-218ENST00000592632 EVC2Q86UK5 1308 aa18.41■□□□□ 0.54
DDX39A-218ENST00000592632 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
DDX39A-218ENST00000592632 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-218ENST00000592632 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
DDX39A-218ENST00000592632 SPATA31A3Q5VYP0 1347 aa18.4■□□□□ 0.54
DDX39A-218ENST00000592632 ST20-MTHFSA0A0A6YYL1 179 aa18.39■□□□□ 0.53
DDX39A-218ENST00000592632 SBNO2Q9Y2G9 1366 aa18.38■□□□□ 0.53
DDX39A-218ENST00000592632 TESK2Q96S53 571 aa18.37■□□□□ 0.53
DDX39A-218ENST00000592632 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
DDX39A-218ENST00000592632 ACEP12821 1306 aa18.36■□□□□ 0.53
DDX39A-218ENST00000592632 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
DDX39A-218ENST00000592632 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
DDX39A-218ENST00000592632 POLR3AO14802 1390 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-218ENST00000592632 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
DDX39A-218ENST00000592632 USP47Q96K76 1375 aa18.33■□□□□ 0.53
DDX39A-218ENST00000592632 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
DDX39A-218ENST00000592632 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
DDX39A-218ENST00000592632 AFF2P51816 1311 aa18.32■□□□□ 0.52
DDX39A-218ENST00000592632 COL22A1Q8NFW1 1626 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-218ENST00000592632 ADAMTS2O95450 1211 aa18.31■□□□□ 0.52
DDX39A-218ENST00000592632 RXRBP28702 533 aa18.31■□□□□ 0.52
DDX39A-218ENST00000592632 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
DDX39A-218ENST00000592632 TRPM3Q9HCF6 1732 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-218ENST00000592632 CABLES1Q8TDN4 633 aa18.3■□□□□ 0.52
DDX39A-218ENST00000592632 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
DDX39A-218ENST00000592632 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
DDX39A-218ENST00000592632 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-218ENST00000592632 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
DDX39A-218ENST00000592632 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms