RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SIRT1Q96EB6 747 aa29.58■■■□□ 2.33
CIRBP-239ENST00000592467 PHF23Q9BUL5 403 aaPredicted RBP29.57■■■□□ 2.32
CIRBP-239ENST00000592467 LRP6O75581 1613 aa29.56■■■□□ 2.32
CIRBP-239ENST00000592467 DDX17Q92841 729 aaKnown RBP29.56■■■□□ 2.32
CIRBP-239ENST00000592467 DCAF11Q8TEB1 546 aa29.55■■■□□ 2.32
CIRBP-239ENST00000592467 ORAI2Q96SN7 254 aa29.55■■■□□ 2.32
CIRBP-239ENST00000592467 SOCS7O14512 581 aa29.54■■■□□ 2.32
CIRBP-239ENST00000592467 DLC1Q96QB1 1528 aa29.53■■■□□ 2.32
CIRBP-239ENST00000592467 FMN2Q9NZ56 1722 aa29.53■■■□□ 2.32
CIRBP-239ENST00000592467 STAC3Q96MF2 364 aa29.52■■■□□ 2.32
CIRBP-239ENST00000592467 KDM2AQ9Y2K7 1162 aa29.52■■■□□ 2.32
CIRBP-239ENST00000592467 SPATA31A6Q5VVP1 1343 aa29.51■■■□□ 2.32
CIRBP-239ENST00000592467 SOS2Q07890 1332 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-239ENST00000592467 PNPLA6Q8IY17 1366 aa29.44■■■□□ 2.3
CIRBP-239ENST00000592467 LRRC59Q96AG4 307 aaKnown RBP29.44■■■□□ 2.3
CIRBP-239ENST00000592467 PRAM1Q96QH2 718 aa29.43■■■□□ 2.3
CIRBP-239ENST00000592467 RGPD8O14715 1765 aaPredicted RBP29.43■■■□□ 2.3
CIRBP-239ENST00000592467 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
CIRBP-239ENST00000592467 POTEAQ6S8J7 498 aa29.41■■■□□ 2.3
CIRBP-239ENST00000592467 KIAA1210Q9ULL0 1709 aa29.41■■■□□ 2.3
CIRBP-239ENST00000592467 PXDNQ92626 1479 aa29.41■■■□□ 2.3
CIRBP-239ENST00000592467 ESCO1Q5FWF5 840 aa29.4■■■□□ 2.3
CIRBP-239ENST00000592467 NUTM2FA1L443 756 aa29.39■■■□□ 2.3
CIRBP-239ENST00000592467 ARHGEF28Q8N1W1 1705 aaKnown RBP29.39■■■□□ 2.3
CIRBP-239ENST00000592467 TRAK1Q9UPV9 953 aa29.38■■■□□ 2.29
CIRBP-239ENST00000592467 USP32Q8NFA0 1604 aa29.37■■■□□ 2.29
CIRBP-239ENST00000592467 KIF1AQ12756 1690 aa29.37■■■□□ 2.29
CIRBP-239ENST00000592467 COL22A1Q8NFW1 1626 aaPredicted RBP29.36■■■□□ 2.29
CIRBP-239ENST00000592467 SAFB2Q14151 953 aaKnown RBP eCLIP29.36■■■□□ 2.29
CIRBP-239ENST00000592467 NPHP3Q7Z494 1330 aa29.33■■■□□ 2.29
CIRBP-239ENST00000592467 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
CIRBP-239ENST00000592467 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
CIRBP-239ENST00000592467 FOXO3O43524 673 aa29.32■■■□□ 2.28
CIRBP-239ENST00000592467 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
CIRBP-239ENST00000592467 POGKQ9P215 609 aa29.32■■■□□ 2.28
CIRBP-239ENST00000592467 SIN3AQ96ST3 1273 aa29.31■■■□□ 2.28
CIRBP-239ENST00000592467 MEX3CQ5U5Q3 659 aaKnown RBP29.28■■■□□ 2.28
CIRBP-239ENST00000592467 ANKARQ7Z5J8 1434 aa29.28■■■□□ 2.28
CIRBP-239ENST00000592467 XPCQ01831 940 aaPredicted RBP29.27■■■□□ 2.28
CIRBP-239ENST00000592467 NBPF1Q3BBV0 1214 aa29.26■■■□□ 2.27
CIRBP-239ENST00000592467 L3MBTL2Q969R5 705 aa29.26■■■□□ 2.27
CIRBP-239ENST00000592467 HIRIP3Q9BW71 556 aaPredicted RBP29.25■■■□□ 2.27
CIRBP-239ENST00000592467 MINK1Q8N4C8 1332 aaPredicted RBP29.24■■■□□ 2.27
CIRBP-239ENST00000592467 TRIM26Q12899 539 aaPredicted RBP29.23■■■□□ 2.27
CIRBP-239ENST00000592467 PHF8Q9UPP1 1060 aa29.23■■■□□ 2.27
CIRBP-239ENST00000592467 TULP4Q9NRJ4 1543 aa29.23■■■□□ 2.27
CIRBP-239ENST00000592467 PRR36Q9H6K5 1346 aa29.22■■■□□ 2.27
CIRBP-239ENST00000592467 ZNF772Q68DY9 489 aaPredicted RBP29.21■■■□□ 2.27
CIRBP-239ENST00000592467 WASLO00401 505 aaPredicted RBP29.2■■■□□ 2.26
CIRBP-239ENST00000592467 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.26
CIRBP-239ENST00000592467 AFF2P51816 1311 aa29.2■■■□□ 2.26
CIRBP-239ENST00000592467 MARF1Q9Y4F3 1742 aaKnown RBP29.19■■■□□ 2.26
CIRBP-239ENST00000592467 SPATA31A3Q5VYP0 1347 aa29.19■■■□□ 2.26
CIRBP-239ENST00000592467 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
CIRBP-239ENST00000592467 NEUROD1Q13562 356 aa29.16■■■□□ 2.26
CIRBP-239ENST00000592467 C8orf37Q96NL8 207 aa29.16■■■□□ 2.26
CIRBP-239ENST00000592467 TRPM3Q9HCF6 1732 aaPredicted RBP29.16■■■□□ 2.26
CIRBP-239ENST00000592467 EIF3AQ14152 1382 aaKnown RBP29.15■■■□□ 2.26
CIRBP-239ENST00000592467 ADAMTS2O95450 1211 aa29.15■■■□□ 2.26
CIRBP-239ENST00000592467 ATP7BP35670 1465 aa29.14■■■□□ 2.26
CIRBP-239ENST00000592467 PMFBP1Q8TBY8 1022 aa29.13■■■□□ 2.25
CIRBP-239ENST00000592467 SBNO1A3KN83 1393 aa29.13■■■□□ 2.25
CIRBP-239ENST00000592467 TNS3Q68CZ2 1445 aa29.12■■■□□ 2.25
CIRBP-239ENST00000592467 ITSN1Q15811 1721 aa29.11■■■□□ 2.25
CIRBP-239ENST00000592467 TOPAZ1Q8N9V7 1692 aa29.11■■■□□ 2.25
CIRBP-239ENST00000592467 ABCA3Q99758 1704 aa29.09■■■□□ 2.25
CIRBP-239ENST00000592467 ALS2Q96Q42 1657 aa29.09■■■□□ 2.25
CIRBP-239ENST00000592467 QRICH2Q9H0J4 1663 aa29.08■■■□□ 2.25
CIRBP-239ENST00000592467 PSME1Q06323 249 aa29.07■■■□□ 2.24
CIRBP-239ENST00000592467 FNBP4Q8N3X1 1017 aaPredicted RBP29.07■■■□□ 2.24
CIRBP-239ENST00000592467 NGLY1Q96IV0 654 aa29.07■■■□□ 2.24
CIRBP-239ENST00000592467 CDK19Q9BWU1 502 aa29.06■■■□□ 2.24
CIRBP-239ENST00000592467 CDK12Q9NYV4 1490 aaPredicted RBP29.05■■■□□ 2.24
CIRBP-239ENST00000592467 NBPF8Q3BBV2 869 aa29.05■■■□□ 2.24
CIRBP-239ENST00000592467 NUDT16Q96DE0 195 aaKnown RBP29.05■■■□□ 2.24
CIRBP-239ENST00000592467 RXRBP28702 533 aa29.04■■■□□ 2.24
CIRBP-239ENST00000592467 CENPJQ9HC77 1338 aaPredicted RBP29.03■■■□□ 2.24
CIRBP-239ENST00000592467 QTRT2Q9H974 415 aaKnown RBP29.02■■■□□ 2.24
CIRBP-239ENST00000592467 BCL9LQ86UU0 1499 aa29.02■■■□□ 2.24
CIRBP-239ENST00000592467 ARHGEF10O15013 1369 aa29.01■■■□□ 2.23
CIRBP-239ENST00000592467 CRYBG1Q9Y4K1 1723 aa29■■■□□ 2.23
CIRBP-239ENST00000592467 USP21Q9UK80 565 aa29■■■□□ 2.23
CIRBP-239ENST00000592467 GPRASP1Q5JY77 1395 aa29■■■□□ 2.23
CIRBP-239ENST00000592467 ATRNO75882 1429 aa28.99■■■□□ 2.23
CIRBP-239ENST00000592467 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.99■■■□□ 2.23
CIRBP-239ENST00000592467 CABLES1Q8TDN4 633 aa28.98■■■□□ 2.23
CIRBP-239ENST00000592467 SLIT2O94813 1529 aa28.98■■■□□ 2.23
CIRBP-239ENST00000592467 POLR3AO14802 1390 aaPredicted RBP28.98■■■□□ 2.23
CIRBP-239ENST00000592467 ROCK2O75116 1388 aaKnown RBP28.98■■■□□ 2.23
CIRBP-239ENST00000592467 RBM6P78332 1123 aaKnown RBP28.97■■■□□ 2.23
CIRBP-239ENST00000592467 RGS12O14924 1447 aa28.96■■■□□ 2.23
CIRBP-239ENST00000592467 NGDNQ8NEJ9 315 aaKnown RBP28.95■■■□□ 2.22
CIRBP-239ENST00000592467 CCDC61Q9Y6R9 512 aa28.95■■■□□ 2.22
CIRBP-239ENST00000592467 PLEKHG3A1L390 1219 aa28.94■■■□□ 2.22
CIRBP-239ENST00000592467 TRPC5Q9UL62 973 aaPredicted RBP28.93■■■□□ 2.22
CIRBP-239ENST00000592467 PLCH1Q4KWH8 1693 aa28.93■■■□□ 2.22
CIRBP-239ENST00000592467 LMOD2Q6P5Q4 547 aa28.92■■■□□ 2.22
CIRBP-239ENST00000592467 TONSLQ96HA7 1378 aa28.91■■■□□ 2.22
CIRBP-239ENST00000592467 ACEP12821 1306 aa28.91■■■□□ 2.22
CIRBP-239ENST00000592467 RALGAPBQ86X10 1494 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms