RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 AHDC1Q5TGY3 1603 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-227ENST00000591849 RGS17Q9UGC6 210 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-227ENST00000591849 ESCO1Q5FWF5 840 aa14.43□□□□□ -0.1
BRCA1-227ENST00000591849 JCADQ9P266 1359 aa14.43□□□□□ -0.1
BRCA1-227ENST00000591849 PLEKHH1Q9ULM0 1364 aa14.43□□□□□ -0.1
BRCA1-227ENST00000591849 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
BRCA1-227ENST00000591849 TECPR2O15040 1411 aa14.42□□□□□ -0.1
BRCA1-227ENST00000591849 MST1RQ04912 1400 aa14.42□□□□□ -0.1
BRCA1-227ENST00000591849 PRAG1Q86YV5 1406 aa14.42□□□□□ -0.1
BRCA1-227ENST00000591849 TONSLQ96HA7 1378 aa14.42□□□□□ -0.1
BRCA1-227ENST00000591849 ORAI2Q96SN7 254 aa14.41□□□□□ -0.1
BRCA1-227ENST00000591849 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
BRCA1-227ENST00000591849 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-227ENST00000591849 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
BRCA1-227ENST00000591849 LAMC1P11047 1609 aa14.4□□□□□ -0.1
BRCA1-227ENST00000591849 C1orf167Q5SNV9 1468 aa14.39□□□□□ -0.11
BRCA1-227ENST00000591849 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
BRCA1-227ENST00000591849 HIRIP3Q9BW71 556 aaPredicted RBP14.39□□□□□ -0.11
BRCA1-227ENST00000591849 NHSL1Q5SYE7 1610 aa14.38□□□□□ -0.11
BRCA1-227ENST00000591849 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
BRCA1-227ENST00000591849 NALCNQ8IZF0 1738 aa14.36□□□□□ -0.11
BRCA1-227ENST00000591849 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
BRCA1-227ENST00000591849 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
BRCA1-227ENST00000591849 SPATA31A6Q5VVP1 1343 aa14.36□□□□□ -0.11
BRCA1-227ENST00000591849 LRP6O75581 1613 aa14.35□□□□□ -0.11
BRCA1-227ENST00000591849 NUTM2BA6NNL0 878 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-227ENST00000591849 NUTM2EB1AL46 878 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-227ENST00000591849 FOXO3O43524 673 aa14.35□□□□□ -0.11
BRCA1-227ENST00000591849 POTEAQ6S8J7 498 aa14.35□□□□□ -0.11
BRCA1-227ENST00000591849 NUTM2AQ8IVF1 878 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-227ENST00000591849 NPHP3Q7Z494 1330 aa14.35□□□□□ -0.11
BRCA1-227ENST00000591849 DLC1Q96QB1 1528 aa14.35□□□□□ -0.11
BRCA1-227ENST00000591849 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
BRCA1-227ENST00000591849 ADGRB1O14514 1584 aa14.34□□□□□ -0.11
BRCA1-227ENST00000591849 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-227ENST00000591849 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
BRCA1-227ENST00000591849 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
BRCA1-227ENST00000591849 EIF3AQ14152 1382 aaKnown RBP14.33□□□□□ -0.12
BRCA1-227ENST00000591849 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
BRCA1-227ENST00000591849 CDC42BPGQ6DT37 1551 aa14.32□□□□□ -0.12
BRCA1-227ENST00000591849 PSME1Q06323 249 aa14.32□□□□□ -0.12
BRCA1-227ENST00000591849 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
BRCA1-227ENST00000591849 CENPJQ9HC77 1338 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-227ENST00000591849 KRT28Q7Z3Y7 464 aa14.31□□□□□ -0.12
BRCA1-227ENST00000591849 PMFBP1Q8TBY8 1022 aa14.31□□□□□ -0.12
BRCA1-227ENST00000591849 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
BRCA1-227ENST00000591849 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
BRCA1-227ENST00000591849 SRPK2P78362 688 aaKnown RBP14.3□□□□□ -0.12
BRCA1-227ENST00000591849 LMOD2Q6P5Q4 547 aa14.29□□□□□ -0.12
BRCA1-227ENST00000591849 NGDNQ8NEJ9 315 aaKnown RBP14.29□□□□□ -0.12
BRCA1-227ENST00000591849 SOS2Q07890 1332 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-227ENST00000591849 CLSPNQ9HAW4 1339 aa14.29□□□□□ -0.12
BRCA1-227ENST00000591849 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
BRCA1-227ENST00000591849 KIAA1210Q9ULL0 1709 aa14.27□□□□□ -0.13
BRCA1-227ENST00000591849 CDK12Q9NYV4 1490 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-227ENST00000591849 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
BRCA1-227ENST00000591849 GPRASP1Q5JY77 1395 aa14.26□□□□□ -0.13
BRCA1-227ENST00000591849 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
BRCA1-227ENST00000591849 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-227ENST00000591849 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-227ENST00000591849 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
BRCA1-227ENST00000591849 ADAMTS2O95450 1211 aa14.25□□□□□ -0.13
BRCA1-227ENST00000591849 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
BRCA1-227ENST00000591849 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
BRCA1-227ENST00000591849 PRR36Q9H6K5 1346 aa14.24□□□□□ -0.13
BRCA1-227ENST00000591849 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-227ENST00000591849 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
BRCA1-227ENST00000591849 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
BRCA1-227ENST00000591849 FMN2Q9NZ56 1722 aa14.23□□□□□ -0.13
BRCA1-227ENST00000591849 SPATA31A3Q5VYP0 1347 aa14.22□□□□□ -0.13
BRCA1-227ENST00000591849 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
BRCA1-227ENST00000591849 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
BRCA1-227ENST00000591849 TULP4Q9NRJ4 1543 aa14.21□□□□□ -0.13
BRCA1-227ENST00000591849 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
BRCA1-227ENST00000591849 ARHGEF28Q8N1W1 1705 aaKnown RBP14.2□□□□□ -0.14
BRCA1-227ENST00000591849 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
BRCA1-227ENST00000591849 COL22A1Q8NFW1 1626 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-227ENST00000591849 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
BRCA1-227ENST00000591849 SBNO1A3KN83 1393 aa14.19□□□□□ -0.14
BRCA1-227ENST00000591849 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 PXDNQ92626 1479 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 KIF1AQ12756 1690 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 PLEKHG3A1L390 1219 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
BRCA1-227ENST00000591849 ACEP12821 1306 aa14.17□□□□□ -0.14
BRCA1-227ENST00000591849 AFF2P51816 1311 aa14.17□□□□□ -0.14
BRCA1-227ENST00000591849 RXRBP28702 533 aa14.17□□□□□ -0.14
BRCA1-227ENST00000591849 CABP1Q9NZU7 370 aa14.17□□□□□ -0.14
BRCA1-227ENST00000591849 ST20-MTHFSA0A0A6YYL1 179 aa14.16□□□□□ -0.14
BRCA1-227ENST00000591849 CABLES1Q8TDN4 633 aa14.16□□□□□ -0.14
BRCA1-227ENST00000591849 TNS3Q68CZ2 1445 aa14.15□□□□□ -0.14
BRCA1-227ENST00000591849 TMC1Q8TDI8 760 aa14.15□□□□□ -0.14
BRCA1-227ENST00000591849 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
BRCA1-227ENST00000591849 ATP7BP35670 1465 aa14.14□□□□□ -0.15
BRCA1-227ENST00000591849 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
BRCA1-227ENST00000591849 USP21Q9UK80 565 aa14.14□□□□□ -0.15
BRCA1-227ENST00000591849 RGS12O14924 1447 aa14.14□□□□□ -0.15
BRCA1-227ENST00000591849 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
BRCA1-227ENST00000591849 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms