RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NUTM2FA1L443 756 aa16.63■□□□□ 0.25
VMP1-211ENST00000591315 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
VMP1-211ENST00000591315 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
VMP1-211ENST00000591315 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
VMP1-211ENST00000591315 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
VMP1-211ENST00000591315 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
VMP1-211ENST00000591315 POGKQ9P215 609 aa16.61■□□□□ 0.25
VMP1-211ENST00000591315 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
VMP1-211ENST00000591315 HIRIP3Q9BW71 556 aaPredicted RBP16.6■□□□□ 0.25
VMP1-211ENST00000591315 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
VMP1-211ENST00000591315 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
VMP1-211ENST00000591315 MINK1Q8N4C8 1332 aaPredicted RBP16.58■□□□□ 0.24
VMP1-211ENST00000591315 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
VMP1-211ENST00000591315 PHLPP1O60346 1717 aa16.58■□□□□ 0.24
VMP1-211ENST00000591315 ARHGEF28Q8N1W1 1705 aaKnown RBP16.57■□□□□ 0.24
VMP1-211ENST00000591315 TONSLQ96HA7 1378 aa16.57■□□□□ 0.24
VMP1-211ENST00000591315 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
VMP1-211ENST00000591315 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
VMP1-211ENST00000591315 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
VMP1-211ENST00000591315 FMN2Q9NZ56 1722 aa16.55■□□□□ 0.24
VMP1-211ENST00000591315 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
VMP1-211ENST00000591315 AHDC1Q5TGY3 1603 aaPredicted RBP16.54■□□□□ 0.24
VMP1-211ENST00000591315 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
VMP1-211ENST00000591315 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
VMP1-211ENST00000591315 CCER1Q8TC90 406 aaPredicted RBP16.51■□□□□ 0.23
VMP1-211ENST00000591315 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
VMP1-211ENST00000591315 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
VMP1-211ENST00000591315 USP32Q8NFA0 1604 aa16.5■□□□□ 0.23
VMP1-211ENST00000591315 ADRA2BP18089 450 aa16.5■□□□□ 0.23
VMP1-211ENST00000591315 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
VMP1-211ENST00000591315 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
VMP1-211ENST00000591315 FOXO3O43524 673 aa16.49■□□□□ 0.23
VMP1-211ENST00000591315 ADGRB2O60241 1585 aa16.49■□□□□ 0.23
VMP1-211ENST00000591315 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
VMP1-211ENST00000591315 JCADQ9P266 1359 aa16.47■□□□□ 0.23
VMP1-211ENST00000591315 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
VMP1-211ENST00000591315 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
VMP1-211ENST00000591315 CDK19Q9BWU1 502 aa16.46■□□□□ 0.23
VMP1-211ENST00000591315 PHF8Q9UPP1 1060 aa16.46■□□□□ 0.23
VMP1-211ENST00000591315 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
VMP1-211ENST00000591315 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
VMP1-211ENST00000591315 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
VMP1-211ENST00000591315 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
VMP1-211ENST00000591315 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
VMP1-211ENST00000591315 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
VMP1-211ENST00000591315 PXDNQ92626 1479 aa16.43■□□□□ 0.22
VMP1-211ENST00000591315 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
VMP1-211ENST00000591315 TULP4Q9NRJ4 1543 aa16.43■□□□□ 0.22
VMP1-211ENST00000591315 LRP6O75581 1613 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
VMP1-211ENST00000591315 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
VMP1-211ENST00000591315 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
VMP1-211ENST00000591315 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
VMP1-211ENST00000591315 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
VMP1-211ENST00000591315 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
VMP1-211ENST00000591315 ATP7BP35670 1465 aa16.41■□□□□ 0.22
VMP1-211ENST00000591315 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
VMP1-211ENST00000591315 RGS17Q9UGC6 210 aaPredicted RBP16.4■□□□□ 0.22
VMP1-211ENST00000591315 ILDR2Q71H61 639 aa16.39■□□□□ 0.21
VMP1-211ENST00000591315 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
VMP1-211ENST00000591315 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
VMP1-211ENST00000591315 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
VMP1-211ENST00000591315 PSME1Q06323 249 aa16.36■□□□□ 0.21
VMP1-211ENST00000591315 SPATA31A6Q5VVP1 1343 aa16.36■□□□□ 0.21
VMP1-211ENST00000591315 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
VMP1-211ENST00000591315 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
VMP1-211ENST00000591315 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
VMP1-211ENST00000591315 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
VMP1-211ENST00000591315 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
VMP1-211ENST00000591315 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
VMP1-211ENST00000591315 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
VMP1-211ENST00000591315 MEX3CQ5U5Q3 659 aaKnown RBP16.33■□□□□ 0.2
VMP1-211ENST00000591315 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
VMP1-211ENST00000591315 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
VMP1-211ENST00000591315 ACEP12821 1306 aa16.33■□□□□ 0.2
VMP1-211ENST00000591315 EVC2Q86UK5 1308 aa16.33■□□□□ 0.2
VMP1-211ENST00000591315 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
VMP1-211ENST00000591315 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
VMP1-211ENST00000591315 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
VMP1-211ENST00000591315 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
VMP1-211ENST00000591315 CABP1Q9NZU7 370 aa16.32■□□□□ 0.2
VMP1-211ENST00000591315 COL22A1Q8NFW1 1626 aaPredicted RBP16.31■□□□□ 0.2
VMP1-211ENST00000591315 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
VMP1-211ENST00000591315 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
VMP1-211ENST00000591315 TESK2Q96S53 571 aa16.31■□□□□ 0.2
VMP1-211ENST00000591315 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
VMP1-211ENST00000591315 USP47Q96K76 1375 aa16.3■□□□□ 0.2
VMP1-211ENST00000591315 POLR3AO14802 1390 aaPredicted RBP16.29■□□□□ 0.2
VMP1-211ENST00000591315 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
VMP1-211ENST00000591315 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
VMP1-211ENST00000591315 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
VMP1-211ENST00000591315 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
VMP1-211ENST00000591315 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
VMP1-211ENST00000591315 AFF2P51816 1311 aa16.27■□□□□ 0.2
VMP1-211ENST00000591315 ALS2Q96Q42 1657 aa16.27■□□□□ 0.19
VMP1-211ENST00000591315 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms