RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
CTDP1-206ENST00000590635 DLC1Q96QB1 1528 aa17.52■□□□□ 0.4
CTDP1-206ENST00000590635 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
CTDP1-206ENST00000590635 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
CTDP1-206ENST00000590635 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
CTDP1-206ENST00000590635 MED1Q15648 1581 aaPredicted RBP17.52■□□□□ 0.39
CTDP1-206ENST00000590635 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
CTDP1-206ENST00000590635 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
CTDP1-206ENST00000590635 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
CTDP1-206ENST00000590635 L3MBTL2Q969R5 705 aa17.51■□□□□ 0.39
CTDP1-206ENST00000590635 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
CTDP1-206ENST00000590635 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
CTDP1-206ENST00000590635 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
CTDP1-206ENST00000590635 COL16A1Q07092 1604 aaPredicted RBP17.48■□□□□ 0.39
CTDP1-206ENST00000590635 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
CTDP1-206ENST00000590635 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-206ENST00000590635 EIF3AQ14152 1382 aaKnown RBP17.46■□□□□ 0.39
CTDP1-206ENST00000590635 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
CTDP1-206ENST00000590635 FOXO3O43524 673 aa17.44■□□□□ 0.38
CTDP1-206ENST00000590635 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
CTDP1-206ENST00000590635 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
CTDP1-206ENST00000590635 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
CTDP1-206ENST00000590635 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
CTDP1-206ENST00000590635 WASLO00401 505 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-206ENST00000590635 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
CTDP1-206ENST00000590635 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
CTDP1-206ENST00000590635 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
CTDP1-206ENST00000590635 MINK1Q8N4C8 1332 aaPredicted RBP17.42■□□□□ 0.38
CTDP1-206ENST00000590635 ANKARQ7Z5J8 1434 aa17.41■□□□□ 0.38
CTDP1-206ENST00000590635 PSME1Q06323 249 aa17.41■□□□□ 0.38
CTDP1-206ENST00000590635 TONSLQ96HA7 1378 aa17.4■□□□□ 0.38
CTDP1-206ENST00000590635 HIRIP3Q9BW71 556 aaPredicted RBP17.4■□□□□ 0.38
CTDP1-206ENST00000590635 SHPRHQ149N8 1683 aa17.39■□□□□ 0.37
CTDP1-206ENST00000590635 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
CTDP1-206ENST00000590635 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
CTDP1-206ENST00000590635 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
CTDP1-206ENST00000590635 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
CTDP1-206ENST00000590635 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
CTDP1-206ENST00000590635 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
CTDP1-206ENST00000590635 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-206ENST00000590635 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
CTDP1-206ENST00000590635 RGS17Q9UGC6 210 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-206ENST00000590635 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-206ENST00000590635 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
CTDP1-206ENST00000590635 SOCS7O14512 581 aa17.35■□□□□ 0.37
CTDP1-206ENST00000590635 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
CTDP1-206ENST00000590635 CLSPNQ9HAW4 1339 aa17.35■□□□□ 0.37
CTDP1-206ENST00000590635 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
CTDP1-206ENST00000590635 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
CTDP1-206ENST00000590635 CDK19Q9BWU1 502 aa17.34■□□□□ 0.37
CTDP1-206ENST00000590635 PXDNQ92626 1479 aa17.33■□□□□ 0.37
CTDP1-206ENST00000590635 GPRASP1Q5JY77 1395 aa17.33■□□□□ 0.36
CTDP1-206ENST00000590635 SPATA31A3Q5VYP0 1347 aa17.33■□□□□ 0.36
CTDP1-206ENST00000590635 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
CTDP1-206ENST00000590635 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.36
CTDP1-206ENST00000590635 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
CTDP1-206ENST00000590635 LRP6O75581 1613 aa17.32■□□□□ 0.36
CTDP1-206ENST00000590635 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
CTDP1-206ENST00000590635 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
CTDP1-206ENST00000590635 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
CTDP1-206ENST00000590635 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
CTDP1-206ENST00000590635 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
CTDP1-206ENST00000590635 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
CTDP1-206ENST00000590635 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
CTDP1-206ENST00000590635 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
CTDP1-206ENST00000590635 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
CTDP1-206ENST00000590635 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
CTDP1-206ENST00000590635 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
CTDP1-206ENST00000590635 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
CTDP1-206ENST00000590635 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
CTDP1-206ENST00000590635 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
CTDP1-206ENST00000590635 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
CTDP1-206ENST00000590635 TRPM1Q7Z4N2 1603 aa17.28■□□□□ 0.36
CTDP1-206ENST00000590635 AFF2P51816 1311 aa17.27■□□□□ 0.36
CTDP1-206ENST00000590635 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
CTDP1-206ENST00000590635 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.36
CTDP1-206ENST00000590635 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.35
CTDP1-206ENST00000590635 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
CTDP1-206ENST00000590635 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
CTDP1-206ENST00000590635 USP32Q8NFA0 1604 aa17.25■□□□□ 0.35
CTDP1-206ENST00000590635 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
CTDP1-206ENST00000590635 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
CTDP1-206ENST00000590635 ATP7BP35670 1465 aa17.24■□□□□ 0.35
CTDP1-206ENST00000590635 RXRBP28702 533 aa17.24■□□□□ 0.35
CTDP1-206ENST00000590635 FNBP4Q8N3X1 1017 aaPredicted RBP17.24■□□□□ 0.35
CTDP1-206ENST00000590635 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
CTDP1-206ENST00000590635 RALGAPBQ86X10 1494 aa17.23■□□□□ 0.35
CTDP1-206ENST00000590635 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-206ENST00000590635 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
CTDP1-206ENST00000590635 USP21Q9UK80 565 aa17.22■□□□□ 0.35
CTDP1-206ENST00000590635 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
CTDP1-206ENST00000590635 ACEP12821 1306 aa17.21■□□□□ 0.35
CTDP1-206ENST00000590635 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.35
CTDP1-206ENST00000590635 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
CTDP1-206ENST00000590635 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-206ENST00000590635 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
CTDP1-206ENST00000590635 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-206ENST00000590635 TRPC5Q9UL62 973 aaPredicted RBP17.2■□□□□ 0.34
CTDP1-206ENST00000590635 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
CTDP1-206ENST00000590635 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 425.4 ms