RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 ATAD2Q6PL18 1390 aa22.84■■□□□ 1.25
GHDC-211ENST00000590520 EP400Q96L91 3159 aa22.84■■□□□ 1.25
GHDC-211ENST00000590520 MYOM2P54296 1465 aa22.83■■□□□ 1.25
GHDC-211ENST00000590520 ATRNO75882 1429 aa22.82■■□□□ 1.24
GHDC-211ENST00000590520 USP21Q9UK80 565 aa22.81■■□□□ 1.24
GHDC-211ENST00000590520 TRPC5Q9UL62 973 aaPredicted RBP22.81■■□□□ 1.24
GHDC-211ENST00000590520 PXDNQ92626 1479 aa22.8■■□□□ 1.24
GHDC-211ENST00000590520 KNDC1Q76NI1 1749 aa22.79■■□□□ 1.24
GHDC-211ENST00000590520 NPHP3Q7Z494 1330 aa22.79■■□□□ 1.24
GHDC-211ENST00000590520 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
GHDC-211ENST00000590520 IFT172Q9UG01 1749 aa22.78■■□□□ 1.24
GHDC-211ENST00000590520 SLC4A1APQ9BWU0 796 aaKnown RBP22.77■■□□□ 1.24
GHDC-211ENST00000590520 TECPR2O15040 1411 aa22.76■■□□□ 1.23
GHDC-211ENST00000590520 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.76■■□□□ 1.23
GHDC-211ENST00000590520 ESCO1Q5FWF5 840 aa22.73■■□□□ 1.23
GHDC-211ENST00000590520 KIF1AQ12756 1690 aa22.73■■□□□ 1.23
GHDC-211ENST00000590520 FMN2Q9NZ56 1722 aa22.73■■□□□ 1.23
GHDC-211ENST00000590520 LRPPRCP42704 1394 aaKnown RBP22.72■■□□□ 1.23
GHDC-211ENST00000590520 CCDC144AA2RUR9 1427 aa22.72■■□□□ 1.23
GHDC-211ENST00000590520 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
GHDC-211ENST00000590520 SPATA31E1Q6ZUB1 1445 aa22.69■■□□□ 1.22
GHDC-211ENST00000590520 ANKRD30BQ9BXX2 1392 aa22.68■■□□□ 1.22
GHDC-211ENST00000590520 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
GHDC-211ENST00000590520 FOXD1Q16676 465 aa22.68■■□□□ 1.22
GHDC-211ENST00000590520 PIK3C2GO75747 1445 aa22.66■■□□□ 1.22
GHDC-211ENST00000590520 FOXO3O43524 673 aa22.66■■□□□ 1.22
GHDC-211ENST00000590520 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
GHDC-211ENST00000590520 USP32Q8NFA0 1604 aa22.66■■□□□ 1.22
GHDC-211ENST00000590520 ABCC11Q96J66 1382 aa22.65■■□□□ 1.22
GHDC-211ENST00000590520 STK26Q9P289 416 aa22.64■■□□□ 1.21
GHDC-211ENST00000590520 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
GHDC-211ENST00000590520 GLI3P10071 1580 aa22.63■■□□□ 1.21
GHDC-211ENST00000590520 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
GHDC-211ENST00000590520 SLIT2O94813 1529 aa22.62■■□□□ 1.21
GHDC-211ENST00000590520 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
GHDC-211ENST00000590520 CCDC125Q86Z20 511 aa22.62■■□□□ 1.21
GHDC-211ENST00000590520 GJD4Q96KN9 370 aaPredicted RBP22.62■■□□□ 1.21
GHDC-211ENST00000590520 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
GHDC-211ENST00000590520 YTHDC2Q9H6S0 1430 aaKnown RBP22.61■■□□□ 1.21
GHDC-211ENST00000590520 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
GHDC-211ENST00000590520 ABCA3Q99758 1704 aa22.6■■□□□ 1.21
GHDC-211ENST00000590520 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
GHDC-211ENST00000590520 PLCH1Q4KWH8 1693 aa22.59■■□□□ 1.21
GHDC-211ENST00000590520 RGPD8O14715 1765 aaPredicted RBP22.59■■□□□ 1.21
GHDC-211ENST00000590520 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
GHDC-211ENST00000590520 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
GHDC-211ENST00000590520 NWD2Q9ULI1 1742 aa22.58■■□□□ 1.21
GHDC-211ENST00000590520 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
GHDC-211ENST00000590520 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
GHDC-211ENST00000590520 TMEM132EQ6IEE7 984 aa22.56■■□□□ 1.2
GHDC-211ENST00000590520 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
GHDC-211ENST00000590520 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
GHDC-211ENST00000590520 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
GHDC-211ENST00000590520 KRT28Q7Z3Y7 464 aa22.52■■□□□ 1.2
GHDC-211ENST00000590520 SIRT1Q96EB6 747 aa22.52■■□□□ 1.2
GHDC-211ENST00000590520 HAP1P54257 671 aaPredicted RBP22.5■■□□□ 1.19
GHDC-211ENST00000590520 ADGRB2O60241 1585 aa22.5■■□□□ 1.19
GHDC-211ENST00000590520 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
GHDC-211ENST00000590520 DLC1Q96QB1 1528 aa22.49■■□□□ 1.19
GHDC-211ENST00000590520 PSME1Q06323 249 aa22.49■■□□□ 1.19
GHDC-211ENST00000590520 PHF8Q9UPP1 1060 aa22.49■■□□□ 1.19
GHDC-211ENST00000590520 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
GHDC-211ENST00000590520 DHX57Q6P158 1386 aaKnown RBP22.48■■□□□ 1.19
GHDC-211ENST00000590520 VPS72Q15906 364 aa22.47■■□□□ 1.19
GHDC-211ENST00000590520 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
GHDC-211ENST00000590520 ANKARQ7Z5J8 1434 aa22.47■■□□□ 1.19
GHDC-211ENST00000590520 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
GHDC-211ENST00000590520 TRPM3Q9HCF6 1732 aaPredicted RBP22.45■■□□□ 1.18
GHDC-211ENST00000590520 SEPT12Q8IYM1 358 aa22.44■■□□□ 1.18
GHDC-211ENST00000590520 SF3B2Q13435 895 aaKnown RBP22.43■■□□□ 1.18
GHDC-211ENST00000590520 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
GHDC-211ENST00000590520 LRP5O75197 1615 aa22.42■■□□□ 1.18
GHDC-211ENST00000590520 ACIN1Q9UKV3 1341 aaKnown RBP22.42■■□□□ 1.18
GHDC-211ENST00000590520 CFAP70Q5T0N1 1121 aa22.42■■□□□ 1.18
GHDC-211ENST00000590520 PRAM1Q96QH2 718 aa22.42■■□□□ 1.18
GHDC-211ENST00000590520 ALS2Q96Q42 1657 aa22.42■■□□□ 1.18
GHDC-211ENST00000590520 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
GHDC-211ENST00000590520 ADGRB1O14514 1584 aa22.41■■□□□ 1.18
GHDC-211ENST00000590520 LMOD2Q6P5Q4 547 aa22.4■■□□□ 1.18
GHDC-211ENST00000590520 CCDC9Q9Y3X0 531 aaKnown RBP22.4■■□□□ 1.18
GHDC-211ENST00000590520 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
GHDC-211ENST00000590520 PLEKHG5O94827 1062 aa22.39■■□□□ 1.17
GHDC-211ENST00000590520 SAFB2Q14151 953 aaKnown RBP eCLIP22.39■■□□□ 1.17
GHDC-211ENST00000590520 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
GHDC-211ENST00000590520 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
GHDC-211ENST00000590520 KRT27Q7Z3Y8 459 aa22.38■■□□□ 1.17
GHDC-211ENST00000590520 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
GHDC-211ENST00000590520 TULP4Q9NRJ4 1543 aa22.37■■□□□ 1.17
GHDC-211ENST00000590520 POGKQ9P215 609 aa22.36■■□□□ 1.17
GHDC-211ENST00000590520 RGPD1P0DJD0 1748 aa22.36■■□□□ 1.17
GHDC-211ENST00000590520 PMFBP1Q8TBY8 1022 aa22.35■■□□□ 1.17
GHDC-211ENST00000590520 A0A0G2JS52 829 aa22.33■■□□□ 1.17
GHDC-211ENST00000590520 FAM83GA6ND36 823 aa22.33■■□□□ 1.17
GHDC-211ENST00000590520 MYT1Q01538 1121 aa22.33■■□□□ 1.17
GHDC-211ENST00000590520 ITSN1Q15811 1721 aa22.33■■□□□ 1.17
GHDC-211ENST00000590520 GPRASP1Q5JY77 1395 aa22.33■■□□□ 1.17
GHDC-211ENST00000590520 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
GHDC-211ENST00000590520 BAG6P46379 1132 aa22.3■■□□□ 1.16
GHDC-211ENST00000590520 BTG4Q9NY30 223 aa22.3■■□□□ 1.16
GHDC-211ENST00000590520 FAM98CQ17RN3 349 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms