RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 JCADQ9P266 1359 aa31.17■■■□□ 2.58
LRP3-202ENST00000590275 SIRT1Q96EB6 747 aa31.16■■■□□ 2.58
LRP3-202ENST00000590275 SIN3AQ96ST3 1273 aa31.16■■■□□ 2.58
LRP3-202ENST00000590275 CDC42BPGQ6DT37 1551 aa31.16■■■□□ 2.58
LRP3-202ENST00000590275 NHSL1Q5SYE7 1610 aa31.13■■■□□ 2.57
LRP3-202ENST00000590275 PRAM1Q96QH2 718 aa31.13■■■□□ 2.57
LRP3-202ENST00000590275 TRIM26Q12899 539 aaPredicted RBP31.12■■■□□ 2.57
LRP3-202ENST00000590275 NUTM2FA1L443 756 aa31.11■■■□□ 2.57
LRP3-202ENST00000590275 SAFB2Q14151 953 aaKnown RBP eCLIP31.11■■■□□ 2.57
LRP3-202ENST00000590275 STAC3Q96MF2 364 aa31.11■■■□□ 2.57
LRP3-202ENST00000590275 LRP6O75581 1613 aa31.1■■■□□ 2.57
LRP3-202ENST00000590275 TRAK1Q9UPV9 953 aa31.1■■■□□ 2.57
LRP3-202ENST00000590275 DLC1Q96QB1 1528 aa31.08■■■□□ 2.57
LRP3-202ENST00000590275 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
LRP3-202ENST00000590275 ESCO1Q5FWF5 840 aa31.04■■■□□ 2.56
LRP3-202ENST00000590275 L3MBTL2Q969R5 705 aa31.04■■■□□ 2.56
LRP3-202ENST00000590275 SOS2Q07890 1332 aaPredicted RBP31.02■■■□□ 2.56
LRP3-202ENST00000590275 NBPF1Q3BBV0 1214 aa31.02■■■□□ 2.56
LRP3-202ENST00000590275 SHPRHQ149N8 1683 aa31.02■■■□□ 2.56
LRP3-202ENST00000590275 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.55
LRP3-202ENST00000590275 SPATA31A6Q5VVP1 1343 aa31■■■□□ 2.55
LRP3-202ENST00000590275 NEUROD1Q13562 356 aa31■■■□□ 2.55
LRP3-202ENST00000590275 POGKQ9P215 609 aa31■■■□□ 2.55
LRP3-202ENST00000590275 PNPLA6Q8IY17 1366 aa30.99■■■□□ 2.55
LRP3-202ENST00000590275 LRRC59Q96AG4 307 aaKnown RBP30.98■■■□□ 2.55
LRP3-202ENST00000590275 POTEAQ6S8J7 498 aa30.97■■■□□ 2.55
LRP3-202ENST00000590275 HIRIP3Q9BW71 556 aaPredicted RBP30.97■■■□□ 2.55
LRP3-202ENST00000590275 FOXO3O43524 673 aa30.96■■■□□ 2.55
LRP3-202ENST00000590275 XPCQ01831 940 aaPredicted RBP30.96■■■□□ 2.55
LRP3-202ENST00000590275 PXDNQ92626 1479 aa30.95■■■□□ 2.55
LRP3-202ENST00000590275 MINK1Q8N4C8 1332 aaPredicted RBP30.95■■■□□ 2.54
LRP3-202ENST00000590275 NUTM2BA6NNL0 878 aaPredicted RBP30.94■■■□□ 2.54
LRP3-202ENST00000590275 NUTM2EB1AL46 878 aaPredicted RBP30.94■■■□□ 2.54
LRP3-202ENST00000590275 NUTM2AQ8IVF1 878 aaPredicted RBP30.94■■■□□ 2.54
LRP3-202ENST00000590275 ADGRB2O60241 1585 aa30.92■■■□□ 2.54
LRP3-202ENST00000590275 SOCS7O14512 581 aa30.91■■■□□ 2.54
LRP3-202ENST00000590275 USP32Q8NFA0 1604 aa30.91■■■□□ 2.54
LRP3-202ENST00000590275 NPHP3Q7Z494 1330 aa30.9■■■□□ 2.54
LRP3-202ENST00000590275 PRR36Q9H6K5 1346 aa30.9■■■□□ 2.54
LRP3-202ENST00000590275 ARHGEF28Q8N1W1 1705 aaKnown RBP30.9■■■□□ 2.54
LRP3-202ENST00000590275 KIAA1210Q9ULL0 1709 aa30.9■■■□□ 2.54
LRP3-202ENST00000590275 RGPD8O14715 1765 aaPredicted RBP30.86■■■□□ 2.53
LRP3-202ENST00000590275 PHF8Q9UPP1 1060 aa30.85■■■□□ 2.53
LRP3-202ENST00000590275 WASLO00401 505 aaPredicted RBP30.84■■■□□ 2.53
LRP3-202ENST00000590275 NBPF8Q3BBV2 869 aa30.84■■■□□ 2.53
LRP3-202ENST00000590275 MEX3CQ5U5Q3 659 aaKnown RBP30.83■■■□□ 2.53
LRP3-202ENST00000590275 ANKARQ7Z5J8 1434 aa30.82■■■□□ 2.52
LRP3-202ENST00000590275 PMFBP1Q8TBY8 1022 aa30.81■■■□□ 2.52
LRP3-202ENST00000590275 KRT28Q7Z3Y7 464 aa30.8■■■□□ 2.52
LRP3-202ENST00000590275 KIF1AQ12756 1690 aa30.79■■■□□ 2.52
LRP3-202ENST00000590275 TULP4Q9NRJ4 1543 aa30.78■■■□□ 2.52
LRP3-202ENST00000590275 TRPM1Q7Z4N2 1603 aa30.76■■■□□ 2.52
LRP3-202ENST00000590275 COL22A1Q8NFW1 1626 aaPredicted RBP30.76■■■□□ 2.52
LRP3-202ENST00000590275 SPATA31A3Q5VYP0 1347 aa30.76■■■□□ 2.52
LRP3-202ENST00000590275 ADAMTS2O95450 1211 aa30.76■■■□□ 2.51
LRP3-202ENST00000590275 C8orf37Q96NL8 207 aa30.74■■■□□ 2.51
LRP3-202ENST00000590275 ATP7BP35670 1465 aa30.74■■■□□ 2.51
LRP3-202ENST00000590275 AFF2P51816 1311 aa30.73■■■□□ 2.51
LRP3-202ENST00000590275 CDK19Q9BWU1 502 aa30.73■■■□□ 2.51
LRP3-202ENST00000590275 NUDT16Q96DE0 195 aaKnown RBP30.71■■■□□ 2.51
LRP3-202ENST00000590275 CENPJQ9HC77 1338 aaPredicted RBP30.7■■■□□ 2.5
LRP3-202ENST00000590275 EIF3AQ14152 1382 aaKnown RBP30.67■■■□□ 2.5
LRP3-202ENST00000590275 TNS3Q68CZ2 1445 aa30.67■■■□□ 2.5
LRP3-202ENST00000590275 PSME1Q06323 249 aa30.67■■■□□ 2.5
LRP3-202ENST00000590275 ZNF772Q68DY9 489 aaPredicted RBP30.67■■■□□ 2.5
LRP3-202ENST00000590275 SBNO1A3KN83 1393 aa30.66■■■□□ 2.5
LRP3-202ENST00000590275 ROCK2O75116 1388 aaKnown RBP30.66■■■□□ 2.5
LRP3-202ENST00000590275 TONSLQ96HA7 1378 aa30.65■■■□□ 2.5
LRP3-202ENST00000590275 CABLES1Q8TDN4 633 aa30.64■■■□□ 2.5
LRP3-202ENST00000590275 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.5
LRP3-202ENST00000590275 GPRASP1Q5JY77 1395 aa30.64■■■□□ 2.5
LRP3-202ENST00000590275 NGLY1Q96IV0 654 aa30.63■■■□□ 2.49
LRP3-202ENST00000590275 TRPM3Q9HCF6 1732 aaPredicted RBP30.62■■■□□ 2.49
LRP3-202ENST00000590275 CABP2Q9NPB3 220 aa30.61■■■□□ 2.49
LRP3-202ENST00000590275 PLEKHG5O94827 1062 aa30.6■■■□□ 2.49
LRP3-202ENST00000590275 FNBP4Q8N3X1 1017 aaPredicted RBP30.6■■■□□ 2.49
LRP3-202ENST00000590275 QRICH2Q9H0J4 1663 aa30.59■■■□□ 2.49
LRP3-202ENST00000590275 NGDNQ8NEJ9 315 aaKnown RBP30.59■■■□□ 2.49
LRP3-202ENST00000590275 TOPAZ1Q8N9V7 1692 aa30.58■■■□□ 2.49
LRP3-202ENST00000590275 LMOD2Q6P5Q4 547 aa30.57■■■□□ 2.48
LRP3-202ENST00000590275 CCDC61Q9Y6R9 512 aa30.57■■■□□ 2.48
LRP3-202ENST00000590275 QTRT2Q9H974 415 aaKnown RBP30.56■■■□□ 2.48
LRP3-202ENST00000590275 POLR3AO14802 1390 aaPredicted RBP30.55■■■□□ 2.48
LRP3-202ENST00000590275 ACEP12821 1306 aa30.55■■■□□ 2.48
LRP3-202ENST00000590275 PLEKHG3A1L390 1219 aa30.55■■■□□ 2.48
LRP3-202ENST00000590275 RALGAPBQ86X10 1494 aa30.55■■■□□ 2.48
LRP3-202ENST00000590275 SRPK2P78362 688 aaKnown RBP30.54■■■□□ 2.48
LRP3-202ENST00000590275 USP21Q9UK80 565 aa30.54■■■□□ 2.48
LRP3-202ENST00000590275 BCL9LQ86UU0 1499 aa30.54■■■□□ 2.48
LRP3-202ENST00000590275 ALS2Q96Q42 1657 aa30.53■■■□□ 2.48
LRP3-202ENST00000590275 RXRBP28702 533 aa30.53■■■□□ 2.48
LRP3-202ENST00000590275 ARHGEF10O15013 1369 aa30.53■■■□□ 2.48
LRP3-202ENST00000590275 CARD11Q9BXL7 1154 aa30.51■■■□□ 2.47
LRP3-202ENST00000590275 ITSN1Q15811 1721 aa30.5■■■□□ 2.47
LRP3-202ENST00000590275 PPIP5K1Q6PFW1 1433 aa30.49■■■□□ 2.47
LRP3-202ENST00000590275 ABCA3Q99758 1704 aa30.49■■■□□ 2.47
LRP3-202ENST00000590275 ATRNO75882 1429 aa30.48■■■□□ 2.47
LRP3-202ENST00000590275 MARF1Q9Y4F3 1742 aaKnown RBP30.48■■■□□ 2.47
LRP3-202ENST00000590275 SLIT2O94813 1529 aa30.47■■■□□ 2.47
LRP3-202ENST00000590275 PAK3O75914 559 aaPredicted RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms