RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 STAC3Q96MF2 364 aa26.55■■□□□ 1.84
DDX39A-212ENST00000590260 SIRT1Q96EB6 747 aa26.54■■□□□ 1.84
DDX39A-212ENST00000590260 DISP3Q9P2K9 1392 aa26.54■■□□□ 1.84
DDX39A-212ENST00000590260 FMN2Q9NZ56 1722 aa26.51■■□□□ 1.83
DDX39A-212ENST00000590260 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
DDX39A-212ENST00000590260 L3MBTL2Q969R5 705 aa26.5■■□□□ 1.83
DDX39A-212ENST00000590260 DDX17Q92841 729 aaKnown RBP26.49■■□□□ 1.83
DDX39A-212ENST00000590260 PRAM1Q96QH2 718 aa26.48■■□□□ 1.83
DDX39A-212ENST00000590260 ORAI2Q96SN7 254 aa26.48■■□□□ 1.83
DDX39A-212ENST00000590260 ARHGEF28Q8N1W1 1705 aaKnown RBP26.48■■□□□ 1.83
DDX39A-212ENST00000590260 NEUROD1Q13562 356 aa26.45■■□□□ 1.82
DDX39A-212ENST00000590260 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
DDX39A-212ENST00000590260 ADGRB2O60241 1585 aa26.43■■□□□ 1.82
DDX39A-212ENST00000590260 SAFB2Q14151 953 aaKnown RBP eCLIP26.43■■□□□ 1.82
DDX39A-212ENST00000590260 NBPF1Q3BBV0 1214 aa26.43■■□□□ 1.82
DDX39A-212ENST00000590260 SHPRHQ149N8 1683 aa26.43■■□□□ 1.82
DDX39A-212ENST00000590260 ILDR2Q71H61 639 aa26.42■■□□□ 1.82
DDX39A-212ENST00000590260 JCADQ9P266 1359 aa26.42■■□□□ 1.82
DDX39A-212ENST00000590260 USP32Q8NFA0 1604 aa26.41■■□□□ 1.82
DDX39A-212ENST00000590260 RGPD8O14715 1765 aaPredicted RBP26.41■■□□□ 1.82
DDX39A-212ENST00000590260 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
DDX39A-212ENST00000590260 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
DDX39A-212ENST00000590260 LRP6O75581 1613 aa26.39■■□□□ 1.81
DDX39A-212ENST00000590260 POGKQ9P215 609 aa26.36■■□□□ 1.81
DDX39A-212ENST00000590260 SOS2Q07890 1332 aaPredicted RBP26.35■■□□□ 1.81
DDX39A-212ENST00000590260 ESCO1Q5FWF5 840 aa26.34■■□□□ 1.81
DDX39A-212ENST00000590260 RGS17Q9UGC6 210 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-212ENST00000590260 PXDNQ92626 1479 aa26.34■■□□□ 1.81
DDX39A-212ENST00000590260 HIRIP3Q9BW71 556 aaPredicted RBP26.33■■□□□ 1.81
DDX39A-212ENST00000590260 NBPF8Q3BBV2 869 aa26.32■■□□□ 1.8
DDX39A-212ENST00000590260 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
DDX39A-212ENST00000590260 PNPLA6Q8IY17 1366 aa26.31■■□□□ 1.8
DDX39A-212ENST00000590260 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
DDX39A-212ENST00000590260 KIF1AQ12756 1690 aa26.3■■□□□ 1.8
DDX39A-212ENST00000590260 PRR36Q9H6K5 1346 aa26.29■■□□□ 1.8
DDX39A-212ENST00000590260 LRRC59Q96AG4 307 aaKnown RBP26.28■■□□□ 1.8
DDX39A-212ENST00000590260 SPATA31A6Q5VVP1 1343 aa26.28■■□□□ 1.8
DDX39A-212ENST00000590260 FOXO3O43524 673 aa26.27■■□□□ 1.8
DDX39A-212ENST00000590260 TULP4Q9NRJ4 1543 aa26.27■■□□□ 1.8
DDX39A-212ENST00000590260 ANKARQ7Z5J8 1434 aa26.26■■□□□ 1.79
DDX39A-212ENST00000590260 WASLO00401 505 aaPredicted RBP26.25■■□□□ 1.79
DDX39A-212ENST00000590260 XPCQ01831 940 aaPredicted RBP26.25■■□□□ 1.79
DDX39A-212ENST00000590260 NPHP3Q7Z494 1330 aa26.24■■□□□ 1.79
DDX39A-212ENST00000590260 COL22A1Q8NFW1 1626 aaPredicted RBP26.24■■□□□ 1.79
DDX39A-212ENST00000590260 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
DDX39A-212ENST00000590260 ATP7BP35670 1465 aa26.22■■□□□ 1.79
DDX39A-212ENST00000590260 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
DDX39A-212ENST00000590260 PHF8Q9UPP1 1060 aa26.21■■□□□ 1.79
DDX39A-212ENST00000590260 GPRASP1Q5JY77 1395 aa26.2■■□□□ 1.79
DDX39A-212ENST00000590260 TONSLQ96HA7 1378 aa26.2■■□□□ 1.79
DDX39A-212ENST00000590260 TOPAZ1Q8N9V7 1692 aa26.19■■□□□ 1.78
DDX39A-212ENST00000590260 ROCK2O75116 1388 aaKnown RBP26.18■■□□□ 1.78
DDX39A-212ENST00000590260 NUTM2BA6NNL0 878 aaPredicted RBP26.17■■□□□ 1.78
DDX39A-212ENST00000590260 NUTM2EB1AL46 878 aaPredicted RBP26.17■■□□□ 1.78
DDX39A-212ENST00000590260 NUTM2AQ8IVF1 878 aaPredicted RBP26.17■■□□□ 1.78
DDX39A-212ENST00000590260 PMFBP1Q8TBY8 1022 aa26.17■■□□□ 1.78
DDX39A-212ENST00000590260 RALGAPBQ86X10 1494 aa26.17■■□□□ 1.78
DDX39A-212ENST00000590260 CENPJQ9HC77 1338 aaPredicted RBP26.16■■□□□ 1.78
DDX39A-212ENST00000590260 POTEAQ6S8J7 498 aa26.16■■□□□ 1.78
DDX39A-212ENST00000590260 TRPM3Q9HCF6 1732 aaPredicted RBP26.16■■□□□ 1.78
DDX39A-212ENST00000590260 KRT28Q7Z3Y7 464 aa26.15■■□□□ 1.78
DDX39A-212ENST00000590260 CDK19Q9BWU1 502 aa26.15■■□□□ 1.78
DDX39A-212ENST00000590260 EIF3AQ14152 1382 aaKnown RBP26.14■■□□□ 1.78
DDX39A-212ENST00000590260 ITSN1Q15811 1721 aa26.14■■□□□ 1.77
DDX39A-212ENST00000590260 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.77
DDX39A-212ENST00000590260 NUDT16Q96DE0 195 aaKnown RBP26.13■■□□□ 1.77
DDX39A-212ENST00000590260 TNS3Q68CZ2 1445 aa26.09■■□□□ 1.77
DDX39A-212ENST00000590260 ALS2Q96Q42 1657 aa26.09■■□□□ 1.77
DDX39A-212ENST00000590260 MEX3CQ5U5Q3 659 aaKnown RBP26.08■■□□□ 1.77
DDX39A-212ENST00000590260 SBNO1A3KN83 1393 aa26.07■■□□□ 1.76
DDX39A-212ENST00000590260 ABCA3Q99758 1704 aa26.07■■□□□ 1.76
DDX39A-212ENST00000590260 MARF1Q9Y4F3 1742 aaKnown RBP26.06■■□□□ 1.76
DDX39A-212ENST00000590260 ADAMTS2O95450 1211 aa26.04■■□□□ 1.76
DDX39A-212ENST00000590260 PSME1Q06323 249 aa26.04■■□□□ 1.76
DDX39A-212ENST00000590260 CABP2Q9NPB3 220 aa26.04■■□□□ 1.76
DDX39A-212ENST00000590260 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
DDX39A-212ENST00000590260 CARD11Q9BXL7 1154 aa26.03■■□□□ 1.76
DDX39A-212ENST00000590260 AFF2P51816 1311 aa26.03■■□□□ 1.76
DDX39A-212ENST00000590260 POLR3AO14802 1390 aaPredicted RBP26.03■■□□□ 1.76
DDX39A-212ENST00000590260 CRYBG1Q9Y4K1 1723 aa26.02■■□□□ 1.76
DDX39A-212ENST00000590260 PLEKHG3A1L390 1219 aa26.01■■□□□ 1.75
DDX39A-212ENST00000590260 SOCS7O14512 581 aa26.01■■□□□ 1.75
DDX39A-212ENST00000590260 C8orf37Q96NL8 207 aa26.01■■□□□ 1.75
DDX39A-212ENST00000590260 CCDC61Q9Y6R9 512 aa26.01■■□□□ 1.75
DDX39A-212ENST00000590260 ACEP12821 1306 aa25.99■■□□□ 1.75
DDX39A-212ENST00000590260 SRPK2P78362 688 aaKnown RBP25.99■■□□□ 1.75
DDX39A-212ENST00000590260 NGDNQ8NEJ9 315 aaKnown RBP25.99■■□□□ 1.75
DDX39A-212ENST00000590260 PPIP5K1Q6PFW1 1433 aa25.98■■□□□ 1.75
DDX39A-212ENST00000590260 SBNO2Q9Y2G9 1366 aa25.98■■□□□ 1.75
DDX39A-212ENST00000590260 CABLES1Q8TDN4 633 aa25.98■■□□□ 1.75
DDX39A-212ENST00000590260 ZNF772Q68DY9 489 aaPredicted RBP25.96■■□□□ 1.75
DDX39A-212ENST00000590260 ARHGEF10O15013 1369 aa25.95■■□□□ 1.75
DDX39A-212ENST00000590260 EVC2Q86UK5 1308 aa25.94■■□□□ 1.74
DDX39A-212ENST00000590260 FNBP4Q8N3X1 1017 aaPredicted RBP25.94■■□□□ 1.74
DDX39A-212ENST00000590260 NGLY1Q96IV0 654 aa25.93■■□□□ 1.74
DDX39A-212ENST00000590260 BCL9LQ86UU0 1499 aa25.92■■□□□ 1.74
DDX39A-212ENST00000590260 LMOD2Q6P5Q4 547 aa25.92■■□□□ 1.74
DDX39A-212ENST00000590260 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
DDX39A-212ENST00000590260 CABP1Q9NZU7 370 aa25.91■■□□□ 1.74
DDX39A-212ENST00000590260 TIMELESSQ9UNS1 1208 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms