RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
TMED1-205ENST00000589638 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
TMED1-205ENST00000589638 CHD2O14647 1828 aaKnown RBP24.55■■□□□ 1.52
TMED1-205ENST00000589638 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
TMED1-205ENST00000589638 CDCA8Q53HL2 280 aa24.54■■□□□ 1.52
TMED1-205ENST00000589638 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
TMED1-205ENST00000589638 NWD1Q149M9 1564 aa24.54■■□□□ 1.52
TMED1-205ENST00000589638 TULP4Q9NRJ4 1543 aa24.53■■□□□ 1.52
TMED1-205ENST00000589638 RBM33Q96EV2 1170 aaKnown RBP24.52■■□□□ 1.52
TMED1-205ENST00000589638 SRPK2P78362 688 aaKnown RBP24.5■■□□□ 1.51
TMED1-205ENST00000589638 CABP2Q9NPB3 220 aa24.5■■□□□ 1.51
TMED1-205ENST00000589638 PROSER2Q86WR7 435 aaPredicted RBP24.49■■□□□ 1.51
TMED1-205ENST00000589638 CDK19Q9BWU1 502 aa24.49■■□□□ 1.51
TMED1-205ENST00000589638 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.47■■□□□ 1.51
TMED1-205ENST00000589638 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
TMED1-205ENST00000589638 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
TMED1-205ENST00000589638 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
TMED1-205ENST00000589638 DIEXFQ68CQ4 756 aaKnown RBP24.47■■□□□ 1.51
TMED1-205ENST00000589638 C14orf37Q86TY3 774 aa24.45■■□□□ 1.5
TMED1-205ENST00000589638 STRCP1A6NGW2 1772 aa24.42■■□□□ 1.5
TMED1-205ENST00000589638 TMC1Q8TDI8 760 aa24.42■■□□□ 1.5
TMED1-205ENST00000589638 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
TMED1-205ENST00000589638 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
TMED1-205ENST00000589638 TMEM94Q12767 1356 aa24.41■■□□□ 1.5
TMED1-205ENST00000589638 ADGRL3Q9HAR2 1447 aa24.39■■□□□ 1.5
TMED1-205ENST00000589638 NUTM2FA1L443 756 aa24.39■■□□□ 1.49
TMED1-205ENST00000589638 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
TMED1-205ENST00000589638 NALCNQ8IZF0 1738 aa24.36■■□□□ 1.49
TMED1-205ENST00000589638 NUDT16Q96DE0 195 aaKnown RBP24.36■■□□□ 1.49
TMED1-205ENST00000589638 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
TMED1-205ENST00000589638 PANK3Q9H999 370 aa24.36■■□□□ 1.49
TMED1-205ENST00000589638 PRR36Q9H6K5 1346 aa24.35■■□□□ 1.49
TMED1-205ENST00000589638 MYOM1P52179 1685 aa24.34■■□□□ 1.49
TMED1-205ENST00000589638 LRRC7Q96NW7 1537 aa24.33■■□□□ 1.49
TMED1-205ENST00000589638 CABP1Q9NZU7 370 aa24.32■■□□□ 1.48
TMED1-205ENST00000589638 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
TMED1-205ENST00000589638 ATP7BP35670 1465 aa24.32■■□□□ 1.48
TMED1-205ENST00000589638 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
TMED1-205ENST00000589638 PPIP5K1Q6PFW1 1433 aa24.3■■□□□ 1.48
TMED1-205ENST00000589638 C19orf44Q9H6X5 657 aa24.3■■□□□ 1.48
TMED1-205ENST00000589638 CCDC61Q9Y6R9 512 aa24.3■■□□□ 1.48
TMED1-205ENST00000589638 NINLQ9Y2I6 1382 aa24.29■■□□□ 1.48
TMED1-205ENST00000589638 MSH6P52701 1360 aa24.28■■□□□ 1.48
TMED1-205ENST00000589638 CNGB1Q14028 1251 aaPredicted RBP24.27■■□□□ 1.48
TMED1-205ENST00000589638 FMN2Q9NZ56 1722 aa24.27■■□□□ 1.48
TMED1-205ENST00000589638 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
TMED1-205ENST00000589638 ATF3P18847 181 aa24.26■■□□□ 1.47
TMED1-205ENST00000589638 ANKRD36BQ8N2N9 1353 aa24.26■■□□□ 1.47
TMED1-205ENST00000589638 USP32Q8NFA0 1604 aa24.24■■□□□ 1.47
TMED1-205ENST00000589638 HDGFL2Q7Z4V5 671 aaPredicted RBP24.24■■□□□ 1.47
TMED1-205ENST00000589638 TERF2IPQ9NYB0 399 aa24.24■■□□□ 1.47
TMED1-205ENST00000589638 A0A1W2PP64 1363 aa24.24■■□□□ 1.47
TMED1-205ENST00000589638 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
TMED1-205ENST00000589638 NSD3Q9BZ95 1437 aa24.22■■□□□ 1.47
TMED1-205ENST00000589638 PER1O15534 1290 aaPredicted RBP24.22■■□□□ 1.47
TMED1-205ENST00000589638 PMFBP1Q8TBY8 1022 aa24.22■■□□□ 1.47
TMED1-205ENST00000589638 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
TMED1-205ENST00000589638 LTBP4Q8N2S1 1624 aa24.21■■□□□ 1.47
TMED1-205ENST00000589638 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
TMED1-205ENST00000589638 DCCP43146 1447 aa24.21■■□□□ 1.47
TMED1-205ENST00000589638 ANP32CO43423 234 aa24.21■■□□□ 1.47
TMED1-205ENST00000589638 CADPS2Q86UW7 1296 aa24.21■■□□□ 1.47
TMED1-205ENST00000589638 XIRP1Q702N8 1843 aaKnown RBP24.2■■□□□ 1.46
TMED1-205ENST00000589638 PLEKHG3A1L390 1219 aa24.2■■□□□ 1.46
TMED1-205ENST00000589638 TOPAZ1Q8N9V7 1692 aa24.2■■□□□ 1.46
TMED1-205ENST00000589638 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
TMED1-205ENST00000589638 ACEP12821 1306 aa24.18■■□□□ 1.46
TMED1-205ENST00000589638 MIER1Q8N108 512 aa24.18■■□□□ 1.46
TMED1-205ENST00000589638 C1orf167Q5SNV9 1468 aa24.18■■□□□ 1.46
TMED1-205ENST00000589638 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
TMED1-205ENST00000589638 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
TMED1-205ENST00000589638 MST1RQ04912 1400 aa24.17■■□□□ 1.46
TMED1-205ENST00000589638 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
TMED1-205ENST00000589638 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
TMED1-205ENST00000589638 ORAI2Q96SN7 254 aa24.16■■□□□ 1.46
TMED1-205ENST00000589638 ITSN1Q15811 1721 aa24.15■■□□□ 1.46
TMED1-205ENST00000589638 CPSF1Q10570 1443 aaKnown RBP24.15■■□□□ 1.46
TMED1-205ENST00000589638 RGPD8O14715 1765 aaPredicted RBP24.14■■□□□ 1.46
TMED1-205ENST00000589638 AMER1Q5JTC6 1135 aaPredicted RBP24.13■■□□□ 1.45
TMED1-205ENST00000589638 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
TMED1-205ENST00000589638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.11■■□□□ 1.45
TMED1-205ENST00000589638 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
TMED1-205ENST00000589638 POLR3AO14802 1390 aaPredicted RBP24.11■■□□□ 1.45
TMED1-205ENST00000589638 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
TMED1-205ENST00000589638 EDC4Q6P2E9 1401 aaKnown RBP24.09■■□□□ 1.45
TMED1-205ENST00000589638 USP6P35125 1406 aa24.08■■□□□ 1.44
TMED1-205ENST00000589638 SLAIN2Q9P270 581 aa24.07■■□□□ 1.44
TMED1-205ENST00000589638 AKAP12Q02952 1782 aa24.06■■□□□ 1.44
TMED1-205ENST00000589638 NPC1L1Q9UHC9 1359 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 MON2Q7Z3U7 1717 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 FOXO3O43524 673 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 PSME1Q06323 249 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
TMED1-205ENST00000589638 RALBP1Q15311 655 aa24.04■■□□□ 1.44
TMED1-205ENST00000589638 FYB1O15117 783 aa24.03■■□□□ 1.44
TMED1-205ENST00000589638 XPCQ01831 940 aaPredicted RBP24.03■■□□□ 1.44
TMED1-205ENST00000589638 BRINP3Q76B58 766 aa24.03■■□□□ 1.44
TMED1-205ENST00000589638 NME9Q86XW9 330 aa24.03■■□□□ 1.44
TMED1-205ENST00000589638 PARD3Q8TEW0 1356 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms