RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 ROBO2Q9HCK4 1378 aa19.14■□□□□ 0.65
CCBE1-204ENST00000589419 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
CCBE1-204ENST00000589419 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
CCBE1-204ENST00000589419 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
CCBE1-204ENST00000589419 AMOTL2Q9Y2J4 779 aa19.11■□□□□ 0.65
CCBE1-204ENST00000589419 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
CCBE1-204ENST00000589419 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
CCBE1-204ENST00000589419 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.1■□□□□ 0.65
CCBE1-204ENST00000589419 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
CCBE1-204ENST00000589419 MINK1Q8N4C8 1332 aaPredicted RBP19.08■□□□□ 0.65
CCBE1-204ENST00000589419 SAFB2Q14151 953 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCBE1-204ENST00000589419 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
CCBE1-204ENST00000589419 ANP32CO43423 234 aa19.06■□□□□ 0.64
CCBE1-204ENST00000589419 KCNA6P17658 529 aa19.04■□□□□ 0.64
CCBE1-204ENST00000589419 HSPA2P54652 639 aa19.04■□□□□ 0.64
CCBE1-204ENST00000589419 CDC42BPGQ6DT37 1551 aa19.04■□□□□ 0.64
CCBE1-204ENST00000589419 MIER1Q8N108 512 aa19.04■□□□□ 0.64
CCBE1-204ENST00000589419 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
CCBE1-204ENST00000589419 TOPAZ1Q8N9V7 1692 aa19.03■□□□□ 0.64
CCBE1-204ENST00000589419 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
CCBE1-204ENST00000589419 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
CCBE1-204ENST00000589419 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.64
CCBE1-204ENST00000589419 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.64
CCBE1-204ENST00000589419 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
CCBE1-204ENST00000589419 ITSN1Q15811 1721 aa19.01■□□□□ 0.63
CCBE1-204ENST00000589419 PANK3Q9H999 370 aa19.01■□□□□ 0.63
CCBE1-204ENST00000589419 ATP7BP35670 1465 aa19.01■□□□□ 0.63
CCBE1-204ENST00000589419 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
CCBE1-204ENST00000589419 CABP2Q9NPB3 220 aa19■□□□□ 0.63
CCBE1-204ENST00000589419 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
CCBE1-204ENST00000589419 ADGRL3Q9HAR2 1447 aa19■□□□□ 0.63
CCBE1-204ENST00000589419 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
CCBE1-204ENST00000589419 PER1O15534 1290 aaPredicted RBP18.99■□□□□ 0.63
CCBE1-204ENST00000589419 STRCP1A6NGW2 1772 aa18.98■□□□□ 0.63
CCBE1-204ENST00000589419 PRKRIP1Q9H875 184 aaPredicted RBP18.97■□□□□ 0.63
CCBE1-204ENST00000589419 ANKARQ7Z5J8 1434 aa18.97■□□□□ 0.63
CCBE1-204ENST00000589419 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
CCBE1-204ENST00000589419 NCOA3Q9Y6Q9 1424 aa18.96■□□□□ 0.63
CCBE1-204ENST00000589419 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
CCBE1-204ENST00000589419 AKAP12Q02952 1782 aa18.95■□□□□ 0.62
CCBE1-204ENST00000589419 CD163L1Q9NR16 1453 aa18.95■□□□□ 0.62
CCBE1-204ENST00000589419 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
CCBE1-204ENST00000589419 KNSTRNQ9Y448 316 aa18.94■□□□□ 0.62
CCBE1-204ENST00000589419 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
CCBE1-204ENST00000589419 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
CCBE1-204ENST00000589419 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
CCBE1-204ENST00000589419 NSD3Q9BZ95 1437 aa18.93■□□□□ 0.62
CCBE1-204ENST00000589419 RALBP1Q15311 655 aa18.92■□□□□ 0.62
CCBE1-204ENST00000589419 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
CCBE1-204ENST00000589419 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
CCBE1-204ENST00000589419 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
CCBE1-204ENST00000589419 A0A1W2PP64 1363 aa18.92■□□□□ 0.62
CCBE1-204ENST00000589419 CCDC61Q9Y6R9 512 aa18.91■□□□□ 0.62
CCBE1-204ENST00000589419 NSD2O96028 1365 aa18.91■□□□□ 0.62
CCBE1-204ENST00000589419 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
CCBE1-204ENST00000589419 ANKRD26Q9UPS8 1709 aa18.9■□□□□ 0.62
CCBE1-204ENST00000589419 PRR36Q9H6K5 1346 aa18.9■□□□□ 0.62
CCBE1-204ENST00000589419 DCCP43146 1447 aa18.9■□□□□ 0.62
CCBE1-204ENST00000589419 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
CCBE1-204ENST00000589419 HDGFL2Q7Z4V5 671 aaPredicted RBP18.89■□□□□ 0.61
CCBE1-204ENST00000589419 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
CCBE1-204ENST00000589419 KIF20BQ96Q89 1820 aa18.88■□□□□ 0.61
CCBE1-204ENST00000589419 NRKQ7Z2Y5 1582 aa18.88■□□□□ 0.61
CCBE1-204ENST00000589419 RGPD8O14715 1765 aaPredicted RBP18.87■□□□□ 0.61
CCBE1-204ENST00000589419 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CCBE1-204ENST00000589419 CABP1Q9NZU7 370 aa18.87■□□□□ 0.61
CCBE1-204ENST00000589419 CGNL1Q0VF96 1302 aa18.86■□□□□ 0.61
CCBE1-204ENST00000589419 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
CCBE1-204ENST00000589419 PLEKHG3A1L390 1219 aa18.86■□□□□ 0.61
CCBE1-204ENST00000589419 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
CCBE1-204ENST00000589419 EDC4Q6P2E9 1401 aaKnown RBP18.85■□□□□ 0.61
CCBE1-204ENST00000589419 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
CCBE1-204ENST00000589419 POLR3AO14802 1390 aaPredicted RBP18.83■□□□□ 0.61
CCBE1-204ENST00000589419 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.6
CCBE1-204ENST00000589419 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
CCBE1-204ENST00000589419 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
CCBE1-204ENST00000589419 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
CCBE1-204ENST00000589419 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
CCBE1-204ENST00000589419 BRD4O60885 1362 aaPredicted RBP18.81■□□□□ 0.6
CCBE1-204ENST00000589419 C19orf44Q9H6X5 657 aa18.81■□□□□ 0.6
CCBE1-204ENST00000589419 USP6P35125 1406 aa18.8■□□□□ 0.6
CCBE1-204ENST00000589419 ZNF335Q9H4Z2 1342 aaPredicted RBP18.79■□□□□ 0.6
CCBE1-204ENST00000589419 NLRP13Q86W25 1043 aa18.79■□□□□ 0.6
CCBE1-204ENST00000589419 MSH6P52701 1360 aa18.79■□□□□ 0.6
CCBE1-204ENST00000589419 ACEP12821 1306 aa18.78■□□□□ 0.6
CCBE1-204ENST00000589419 SSH2Q76I76 1423 aa18.77■□□□□ 0.6
CCBE1-204ENST00000589419 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
CCBE1-204ENST00000589419 MST1RQ04912 1400 aa18.76■□□□□ 0.59
CCBE1-204ENST00000589419 C1orf167Q5SNV9 1468 aa18.76■□□□□ 0.59
CCBE1-204ENST00000589419 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
CCBE1-204ENST00000589419 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
CCBE1-204ENST00000589419 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
CCBE1-204ENST00000589419 ATF3P18847 181 aa18.74■□□□□ 0.59
CCBE1-204ENST00000589419 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
CCBE1-204ENST00000589419 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
CCBE1-204ENST00000589419 TTC21AQ8NDW8 1320 aa18.74■□□□□ 0.59
CCBE1-204ENST00000589419 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
CCBE1-204ENST00000589419 MORC1Q86VD1 984 aa18.73■□□□□ 0.59
CCBE1-204ENST00000589419 PHF8Q9UPP1 1060 aa18.73■□□□□ 0.59
CCBE1-204ENST00000589419 LTBP4Q8N2S1 1624 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms