RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SIRT1Q96EB6 747 aa21.12■□□□□ 0.97
DDX39A-208ENST00000588692 DLC1Q96QB1 1528 aa21.1■□□□□ 0.97
DDX39A-208ENST00000588692 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
DDX39A-208ENST00000588692 ADGRB1O14514 1584 aa21.09■□□□□ 0.97
DDX39A-208ENST00000588692 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
DDX39A-208ENST00000588692 FMN2Q9NZ56 1722 aa21.08■□□□□ 0.96
DDX39A-208ENST00000588692 PLEKHH1Q9ULM0 1364 aa21.07■□□□□ 0.96
DDX39A-208ENST00000588692 LRP6O75581 1613 aa21.07■□□□□ 0.96
DDX39A-208ENST00000588692 LRRC59Q96AG4 307 aaKnown RBP21.07■□□□□ 0.96
DDX39A-208ENST00000588692 ORAI2Q96SN7 254 aa21.05■□□□□ 0.96
DDX39A-208ENST00000588692 RGS17Q9UGC6 210 aaPredicted RBP21.05■□□□□ 0.96
DDX39A-208ENST00000588692 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
DDX39A-208ENST00000588692 SOS2Q07890 1332 aaPredicted RBP21.02■□□□□ 0.96
DDX39A-208ENST00000588692 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
DDX39A-208ENST00000588692 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
DDX39A-208ENST00000588692 DDX17Q92841 729 aaKnown RBP21.01■□□□□ 0.95
DDX39A-208ENST00000588692 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
DDX39A-208ENST00000588692 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
DDX39A-208ENST00000588692 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
DDX39A-208ENST00000588692 PRAM1Q96QH2 718 aa21.01■□□□□ 0.95
DDX39A-208ENST00000588692 NPHP3Q7Z494 1330 aa21■□□□□ 0.95
DDX39A-208ENST00000588692 MEX3CQ5U5Q3 659 aaKnown RBP21■□□□□ 0.95
DDX39A-208ENST00000588692 POGKQ9P215 609 aa20.98■□□□□ 0.95
DDX39A-208ENST00000588692 PXDNQ92626 1479 aa20.97■□□□□ 0.95
DDX39A-208ENST00000588692 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
DDX39A-208ENST00000588692 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
DDX39A-208ENST00000588692 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
DDX39A-208ENST00000588692 RGPD8O14715 1765 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-208ENST00000588692 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
DDX39A-208ENST00000588692 NUTM2BA6NNL0 878 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-208ENST00000588692 NUTM2EB1AL46 878 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-208ENST00000588692 POTEAQ6S8J7 498 aa20.94■□□□□ 0.94
DDX39A-208ENST00000588692 NUTM2AQ8IVF1 878 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-208ENST00000588692 ANKARQ7Z5J8 1434 aa20.94■□□□□ 0.94
DDX39A-208ENST00000588692 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
DDX39A-208ENST00000588692 ZNF772Q68DY9 489 aaPredicted RBP20.93■□□□□ 0.94
DDX39A-208ENST00000588692 EIF3AQ14152 1382 aaKnown RBP20.92■□□□□ 0.94
DDX39A-208ENST00000588692 FOXO3O43524 673 aa20.92■□□□□ 0.94
DDX39A-208ENST00000588692 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
DDX39A-208ENST00000588692 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
DDX39A-208ENST00000588692 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
DDX39A-208ENST00000588692 MINK1Q8N4C8 1332 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-208ENST00000588692 XPCQ01831 940 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-208ENST00000588692 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
DDX39A-208ENST00000588692 AFF2P51816 1311 aa20.85■□□□□ 0.93
DDX39A-208ENST00000588692 HIRIP3Q9BW71 556 aaPredicted RBP20.85■□□□□ 0.93
DDX39A-208ENST00000588692 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
DDX39A-208ENST00000588692 MARF1Q9Y4F3 1742 aaKnown RBP20.85■□□□□ 0.93
DDX39A-208ENST00000588692 C8orf37Q96NL8 207 aa20.84■□□□□ 0.93
DDX39A-208ENST00000588692 SPATA31A3Q5VYP0 1347 aa20.84■□□□□ 0.93
DDX39A-208ENST00000588692 WASLO00401 505 aaPredicted RBP20.83■□□□□ 0.93
DDX39A-208ENST00000588692 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
DDX39A-208ENST00000588692 L3MBTL2Q969R5 705 aa20.83■□□□□ 0.93
DDX39A-208ENST00000588692 PSME1Q06323 249 aa20.82■□□□□ 0.92
DDX39A-208ENST00000588692 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
DDX39A-208ENST00000588692 TNS3Q68CZ2 1445 aa20.82■□□□□ 0.92
DDX39A-208ENST00000588692 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
DDX39A-208ENST00000588692 TRPM1Q7Z4N2 1603 aa20.81■□□□□ 0.92
DDX39A-208ENST00000588692 SBNO1A3KN83 1393 aa20.81■□□□□ 0.92
DDX39A-208ENST00000588692 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
DDX39A-208ENST00000588692 NGLY1Q96IV0 654 aa20.8■□□□□ 0.92
DDX39A-208ENST00000588692 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
DDX39A-208ENST00000588692 ATP7BP35670 1465 aa20.79■□□□□ 0.92
DDX39A-208ENST00000588692 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
DDX39A-208ENST00000588692 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
DDX39A-208ENST00000588692 RXRBP28702 533 aa20.78■□□□□ 0.92
DDX39A-208ENST00000588692 TRPM3Q9HCF6 1732 aaPredicted RBP20.78■□□□□ 0.92
DDX39A-208ENST00000588692 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
DDX39A-208ENST00000588692 PMFBP1Q8TBY8 1022 aa20.77■□□□□ 0.92
DDX39A-208ENST00000588692 TOPAZ1Q8N9V7 1692 aa20.77■□□□□ 0.91
DDX39A-208ENST00000588692 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
DDX39A-208ENST00000588692 QRICH2Q9H0J4 1663 aa20.76■□□□□ 0.91
DDX39A-208ENST00000588692 ABCA3Q99758 1704 aa20.75■□□□□ 0.91
DDX39A-208ENST00000588692 FNBP4Q8N3X1 1017 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-208ENST00000588692 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-208ENST00000588692 ALS2Q96Q42 1657 aa20.74■□□□□ 0.91
DDX39A-208ENST00000588692 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
DDX39A-208ENST00000588692 NUDT16Q96DE0 195 aaKnown RBP20.73■□□□□ 0.91
DDX39A-208ENST00000588692 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
DDX39A-208ENST00000588692 USP21Q9UK80 565 aa20.73■□□□□ 0.91
DDX39A-208ENST00000588692 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
DDX39A-208ENST00000588692 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
DDX39A-208ENST00000588692 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
DDX39A-208ENST00000588692 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
DDX39A-208ENST00000588692 TRPC5Q9UL62 973 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-208ENST00000588692 ATRNO75882 1429 aa20.7■□□□□ 0.9
DDX39A-208ENST00000588692 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-208ENST00000588692 LMOD2Q6P5Q4 547 aa20.69■□□□□ 0.9
DDX39A-208ENST00000588692 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
DDX39A-208ENST00000588692 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
DDX39A-208ENST00000588692 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
DDX39A-208ENST00000588692 SLIT2O94813 1529 aa20.68■□□□□ 0.9
DDX39A-208ENST00000588692 RGS12O14924 1447 aa20.67■□□□□ 0.9
DDX39A-208ENST00000588692 POLR3AO14802 1390 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-208ENST00000588692 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
DDX39A-208ENST00000588692 PLCH1Q4KWH8 1693 aa20.66■□□□□ 0.9
DDX39A-208ENST00000588692 CRYBG1Q9Y4K1 1723 aa20.66■□□□□ 0.9
DDX39A-208ENST00000588692 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
DDX39A-208ENST00000588692 PLEKHG3A1L390 1219 aa20.64■□□□□ 0.89
DDX39A-208ENST00000588692 CABLES1Q8TDN4 633 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms