RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 DCAF11Q8TEB1 546 aa30.64■■■□□ 2.5
NCLN-204ENST00000588428 WAPLQ7Z5K2 1190 aa30.61■■■□□ 2.49
NCLN-204ENST00000588428 PHF23Q9BUL5 403 aaPredicted RBP30.61■■■□□ 2.49
NCLN-204ENST00000588428 PLEKHH1Q9ULM0 1364 aa30.61■■■□□ 2.49
NCLN-204ENST00000588428 FMN2Q9NZ56 1722 aa30.61■■■□□ 2.49
NCLN-204ENST00000588428 SPATA31A6Q5VVP1 1343 aa30.58■■■□□ 2.49
NCLN-204ENST00000588428 KIAA1210Q9ULL0 1709 aa30.58■■■□□ 2.49
NCLN-204ENST00000588428 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
NCLN-204ENST00000588428 ADGRB2O60241 1585 aa30.53■■■□□ 2.48
NCLN-204ENST00000588428 LRRC59Q96AG4 307 aaKnown RBP30.52■■■□□ 2.48
NCLN-204ENST00000588428 ORAI2Q96SN7 254 aa30.52■■■□□ 2.48
NCLN-204ENST00000588428 LRP6O75581 1613 aa30.51■■■□□ 2.47
NCLN-204ENST00000588428 SOS2Q07890 1332 aaPredicted RBP30.49■■■□□ 2.47
NCLN-204ENST00000588428 RGS17Q9UGC6 210 aaPredicted RBP30.49■■■□□ 2.47
NCLN-204ENST00000588428 KIF1AQ12756 1690 aa30.49■■■□□ 2.47
NCLN-204ENST00000588428 ARHGEF28Q8N1W1 1705 aaKnown RBP30.48■■■□□ 2.47
NCLN-204ENST00000588428 SOCS7O14512 581 aa30.48■■■□□ 2.47
NCLN-204ENST00000588428 PRAM1Q96QH2 718 aa30.48■■■□□ 2.47
NCLN-204ENST00000588428 RGPD8O14715 1765 aaPredicted RBP30.46■■■□□ 2.47
NCLN-204ENST00000588428 DDX17Q92841 729 aaKnown RBP30.46■■■□□ 2.47
NCLN-204ENST00000588428 PNPLA6Q8IY17 1366 aa30.45■■■□□ 2.47
NCLN-204ENST00000588428 TRIM26Q12899 539 aaPredicted RBP30.44■■■□□ 2.46
NCLN-204ENST00000588428 NPHP3Q7Z494 1330 aa30.44■■■□□ 2.46
NCLN-204ENST00000588428 ESCO1Q5FWF5 840 aa30.43■■■□□ 2.46
NCLN-204ENST00000588428 POGKQ9P215 609 aa30.42■■■□□ 2.46
NCLN-204ENST00000588428 TRAK1Q9UPV9 953 aa30.42■■■□□ 2.46
NCLN-204ENST00000588428 PXDNQ92626 1479 aa30.42■■■□□ 2.46
NCLN-204ENST00000588428 COL22A1Q8NFW1 1626 aaPredicted RBP30.41■■■□□ 2.46
NCLN-204ENST00000588428 USP32Q8NFA0 1604 aa30.39■■■□□ 2.46
NCLN-204ENST00000588428 ANKARQ7Z5J8 1434 aa30.39■■■□□ 2.45
NCLN-204ENST00000588428 SAFB2Q14151 953 aaKnown RBP eCLIP30.36■■■□□ 2.45
NCLN-204ENST00000588428 NUTM2FA1L443 756 aa30.35■■■□□ 2.45
NCLN-204ENST00000588428 EIF3AQ14152 1382 aaKnown RBP30.34■■■□□ 2.45
NCLN-204ENST00000588428 MEX3CQ5U5Q3 659 aaKnown RBP30.33■■■□□ 2.45
NCLN-204ENST00000588428 L3MBTL2Q969R5 705 aa30.33■■■□□ 2.45
NCLN-204ENST00000588428 SIN3AQ96ST3 1273 aa30.33■■■□□ 2.45
NCLN-204ENST00000588428 FOXO3O43524 673 aa30.32■■■□□ 2.44
NCLN-204ENST00000588428 POTEAQ6S8J7 498 aa30.32■■■□□ 2.44
NCLN-204ENST00000588428 TULP4Q9NRJ4 1543 aa30.32■■■□□ 2.44
NCLN-204ENST00000588428 TRPM1Q7Z4N2 1603 aa30.29■■■□□ 2.44
NCLN-204ENST00000588428 NUTM2BA6NNL0 878 aaPredicted RBP30.29■■■□□ 2.44
NCLN-204ENST00000588428 NUTM2EB1AL46 878 aaPredicted RBP30.29■■■□□ 2.44
NCLN-204ENST00000588428 NUTM2AQ8IVF1 878 aaPredicted RBP30.29■■■□□ 2.44
NCLN-204ENST00000588428 PHF8Q9UPP1 1060 aa30.28■■■□□ 2.44
NCLN-204ENST00000588428 MINK1Q8N4C8 1332 aaPredicted RBP30.27■■■□□ 2.44
NCLN-204ENST00000588428 ZNF772Q68DY9 489 aaPredicted RBP30.27■■■□□ 2.44
NCLN-204ENST00000588428 ITSN1Q15811 1721 aa30.27■■■□□ 2.44
NCLN-204ENST00000588428 WASLO00401 505 aaPredicted RBP30.26■■■□□ 2.43
NCLN-204ENST00000588428 NBPF1Q3BBV0 1214 aa30.26■■■□□ 2.43
NCLN-204ENST00000588428 MARF1Q9Y4F3 1742 aaKnown RBP30.25■■■□□ 2.43
NCLN-204ENST00000588428 HIRIP3Q9BW71 556 aaPredicted RBP30.25■■■□□ 2.43
NCLN-204ENST00000588428 SPATA31A3Q5VYP0 1347 aa30.22■■■□□ 2.43
NCLN-204ENST00000588428 XPCQ01831 940 aaPredicted RBP30.22■■■□□ 2.43
NCLN-204ENST00000588428 NEUROD1Q13562 356 aa30.22■■■□□ 2.43
NCLN-204ENST00000588428 PRR36Q9H6K5 1346 aa30.21■■■□□ 2.43
NCLN-204ENST00000588428 SBNO1A3KN83 1393 aa30.2■■■□□ 2.43
NCLN-204ENST00000588428 KRT28Q7Z3Y7 464 aa30.2■■■□□ 2.43
NCLN-204ENST00000588428 ATP7BP35670 1465 aa30.19■■■□□ 2.42
NCLN-204ENST00000588428 TRPM3Q9HCF6 1732 aaPredicted RBP30.19■■■□□ 2.42
NCLN-204ENST00000588428 TNS3Q68CZ2 1445 aa30.19■■■□□ 2.42
NCLN-204ENST00000588428 AFF2P51816 1311 aa30.19■■■□□ 2.42
NCLN-204ENST00000588428 TOPAZ1Q8N9V7 1692 aa30.18■■■□□ 2.42
NCLN-204ENST00000588428 PSME1Q06323 249 aa30.18■■■□□ 2.42
NCLN-204ENST00000588428 QRICH2Q9H0J4 1663 aa30.17■■■□□ 2.42
NCLN-204ENST00000588428 C8orf37Q96NL8 207 aa30.15■■■□□ 2.42
NCLN-204ENST00000588428 CENPJQ9HC77 1338 aaPredicted RBP30.14■■■□□ 2.42
NCLN-204ENST00000588428 PMFBP1Q8TBY8 1022 aa30.13■■■□□ 2.41
NCLN-204ENST00000588428 ALS2Q96Q42 1657 aa30.13■■■□□ 2.41
NCLN-204ENST00000588428 ABCA3Q99758 1704 aa30.13■■■□□ 2.41
NCLN-204ENST00000588428 ADAMTS2O95450 1211 aa30.12■■■□□ 2.41
NCLN-204ENST00000588428 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
NCLN-204ENST00000588428 GPRASP1Q5JY77 1395 aa30.11■■■□□ 2.41
NCLN-204ENST00000588428 CDK12Q9NYV4 1490 aaPredicted RBP30.11■■■□□ 2.41
NCLN-204ENST00000588428 CDK19Q9BWU1 502 aa30.1■■■□□ 2.41
NCLN-204ENST00000588428 ROCK2O75116 1388 aaKnown RBP30.09■■■□□ 2.41
NCLN-204ENST00000588428 NUDT16Q96DE0 195 aaKnown RBP30.09■■■□□ 2.41
NCLN-204ENST00000588428 NGLY1Q96IV0 654 aa30.09■■■□□ 2.41
NCLN-204ENST00000588428 TONSLQ96HA7 1378 aa30.08■■■□□ 2.41
NCLN-204ENST00000588428 FNBP4Q8N3X1 1017 aaPredicted RBP30.08■■■□□ 2.41
NCLN-204ENST00000588428 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.06■■■□□ 2.4
NCLN-204ENST00000588428 NBPF8Q3BBV2 869 aa30.06■■■□□ 2.4
NCLN-204ENST00000588428 RXRBP28702 533 aa30.04■■■□□ 2.4
NCLN-204ENST00000588428 CCDC61Q9Y6R9 512 aa30.04■■■□□ 2.4
NCLN-204ENST00000588428 POLR3AO14802 1390 aaPredicted RBP30.03■■■□□ 2.4
NCLN-204ENST00000588428 RALGAPBQ86X10 1494 aa30.03■■■□□ 2.4
NCLN-204ENST00000588428 NGDNQ8NEJ9 315 aaKnown RBP30.02■■■□□ 2.4
NCLN-204ENST00000588428 CRYBG1Q9Y4K1 1723 aa30.02■■■□□ 2.4
NCLN-204ENST00000588428 QTRT2Q9H974 415 aaKnown RBP30.01■■■□□ 2.39
NCLN-204ENST00000588428 PLEKHG3A1L390 1219 aa30■■■□□ 2.39
NCLN-204ENST00000588428 USP21Q9UK80 565 aa30■■■□□ 2.39
NCLN-204ENST00000588428 ATRNO75882 1429 aa29.99■■■□□ 2.39
NCLN-204ENST00000588428 RBM6P78332 1123 aaKnown RBP29.99■■■□□ 2.39
NCLN-204ENST00000588428 BCL9LQ86UU0 1499 aa29.99■■■□□ 2.39
NCLN-204ENST00000588428 SLIT2O94813 1529 aa29.98■■■□□ 2.39
NCLN-204ENST00000588428 NWD2Q9ULI1 1742 aa29.98■■■□□ 2.39
NCLN-204ENST00000588428 TRPC5Q9UL62 973 aaPredicted RBP29.96■■■□□ 2.39
NCLN-204ENST00000588428 PLCH1Q4KWH8 1693 aa29.95■■■□□ 2.39
NCLN-204ENST00000588428 SBNO2Q9Y2G9 1366 aa29.95■■■□□ 2.39
NCLN-204ENST00000588428 SRPK2P78362 688 aaKnown RBP29.95■■■□□ 2.39
NCLN-204ENST00000588428 LMOD2Q6P5Q4 547 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms