RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, human

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHAF1A-205	ENST00000587580	SIRT1	Q96EB6	747 aa		34.05	■■■■□ 3.04
CHAF1A-205	ENST00000587580	SIN3A	Q96ST3	1273 aa		34.05	■■■■□ 3.04
CHAF1A-205	ENST00000587580	NHSL1	Q5SYE7	1610 aa		34.04	■■■■□ 3.04
CHAF1A-205	ENST00000587580	NEUROD1	Q13562	356 aa		33.99	■■■■□ 3.03
CHAF1A-205	ENST00000587580	PRAM1	Q96QH2	718 aa		33.99	■■■■□ 3.03
CHAF1A-205	ENST00000587580	KIAA1210	Q9ULL0	1709 aa		33.99	■■■■□ 3.03
CHAF1A-205	ENST00000587580	JCAD	Q9P266	1359 aa		33.98	■■■■□ 3.03
CHAF1A-205	ENST00000587580	TRAK1	Q9UPV9	953 aa		33.97	■■■■□ 3.03
CHAF1A-205	ENST00000587580	FMN2	Q9NZ56	1722 aa		33.96	■■■■□ 3.03
CHAF1A-205	ENST00000587580	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.96	■■■■□ 3.03
CHAF1A-205	ENST00000587580	L3MBTL2	Q969R5	705 aa		33.95	■■■■□ 3.03
CHAF1A-205	ENST00000587580	ORAI2	Q96SN7	254 aa		33.95	■■■■□ 3.03
CHAF1A-205	ENST00000587580	POGK	Q9P215	609 aa		33.95	■■■■□ 3.03
CHAF1A-205	ENST00000587580	DDX17	Q92841	729 aa	Known RBP	33.92	■■■■□ 3.02
CHAF1A-205	ENST00000587580	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.91	■■■■□ 3.02
CHAF1A-205	ENST00000587580	SHPRH	Q149N8	1683 aa		33.9	■■■■□ 3.02
CHAF1A-205	ENST00000587580	NUTM2F	A1L443	756 aa		33.9	■■■■□ 3.02
CHAF1A-205	ENST00000587580	PHF23	Q9BUL5	403 aa	Predicted RBP	33.89	■■■■□ 3.02
CHAF1A-205	ENST00000587580	ADGRB2	O60241	1585 aa		33.88	■■■■□ 3.01
CHAF1A-205	ENST00000587580	ESCO1	Q5FWF5	840 aa		33.87	■■■■□ 3.01
CHAF1A-205	ENST00000587580	NBPF1	Q3BBV0	1214 aa		33.83	■■■■□ 3.01
CHAF1A-205	ENST00000587580	ILDR2	Q71H61	639 aa		33.81	■■■■□ 3
CHAF1A-205	ENST00000587580	LRRC59	Q96AG4	307 aa	Known RBP	33.81	■■■■□ 3
CHAF1A-205	ENST00000587580	SPATA31A6	Q5VVP1	1343 aa		33.8	■■■■□ 3
CHAF1A-205	ENST00000587580	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.8	■■■■□ 3
CHAF1A-205	ENST00000587580	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.8	■■■■□ 3
CHAF1A-205	ENST00000587580	KIF1A	Q12756	1690 aa		33.8	■■■■□ 3
CHAF1A-205	ENST00000587580	RGPD8	O14715	1765 aa	Predicted RBP	33.8	■■■■□ 3
CHAF1A-205	ENST00000587580	TRPM1	Q7Z4N2	1603 aa		33.79	■■■■□ 3
CHAF1A-205	ENST00000587580	SOS2	Q07890	1332 aa	Predicted RBP	33.79	■■■■□ 3
CHAF1A-205	ENST00000587580	NPHP3	Q7Z494	1330 aa		33.78	■■■■□ 3
CHAF1A-205	ENST00000587580	LRP6	O75581	1613 aa		33.77	■■■■□ 3
CHAF1A-205	ENST00000587580	TONSL	Q96HA7	1378 aa		33.75	■■■□□ 2.99
CHAF1A-205	ENST00000587580	USP32	Q8NFA0	1604 aa		33.75	■■■□□ 2.99
CHAF1A-205	ENST00000587580	PNPLA6	Q8IY17	1366 aa		33.74	■■■□□ 2.99
CHAF1A-205	ENST00000587580	ANKAR	Q7Z5J8	1434 aa		33.74	■■■□□ 2.99
CHAF1A-205	ENST00000587580	PCGF6	Q9BYE7	350 aa		33.74	■■■□□ 2.99
CHAF1A-205	ENST00000587580	FOXO3	O43524	673 aa		33.73	■■■□□ 2.99
CHAF1A-205	ENST00000587580	PXDN	Q92626	1479 aa		33.73	■■■□□ 2.99
CHAF1A-205	ENST00000587580	EIF3A	Q14152	1382 aa	Known RBP	33.72	■■■□□ 2.99
CHAF1A-205	ENST00000587580	TULP4	Q9NRJ4	1543 aa		33.7	■■■□□ 2.99
CHAF1A-205	ENST00000587580	WASL	O00401	505 aa	Predicted RBP	33.69	■■■□□ 2.98
CHAF1A-205	ENST00000587580	XPC	Q01831	940 aa	Predicted RBP	33.69	■■■□□ 2.98
CHAF1A-205	ENST00000587580	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.68	■■■□□ 2.98
CHAF1A-205	ENST00000587580	NUTM2E	B1AL46	878 aa	Predicted RBP	33.68	■■■□□ 2.98
CHAF1A-205	ENST00000587580	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.68	■■■□□ 2.98
CHAF1A-205	ENST00000587580	PHF8	Q9UPP1	1060 aa		33.68	■■■□□ 2.98
CHAF1A-205	ENST00000587580	MEX3C	Q5U5Q3	659 aa	Known RBP	33.67	■■■□□ 2.98
CHAF1A-205	ENST00000587580	ROCK2	O75116	1388 aa	Known RBP	33.67	■■■□□ 2.98
CHAF1A-205	ENST00000587580	RGS17	Q9UGC6	210 aa	Predicted RBP	33.66	■■■□□ 2.98
CHAF1A-205	ENST00000587580	NBPF8	Q3BBV2	869 aa		33.65	■■■□□ 2.98
CHAF1A-205	ENST00000587580	PRR36	Q9H6K5	1346 aa		33.63	■■■□□ 2.97
CHAF1A-205	ENST00000587580	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.63	■■■□□ 2.97
CHAF1A-205	ENST00000587580	QRICH2	Q9H0J4	1663 aa		33.62	■■■□□ 2.97
CHAF1A-205	ENST00000587580	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.62	■■■□□ 2.97
CHAF1A-205	ENST00000587580	PMFBP1	Q8TBY8	1022 aa		33.6	■■■□□ 2.97
CHAF1A-205	ENST00000587580	ITSN1	Q15811	1721 aa		33.59	■■■□□ 2.97
CHAF1A-205	ENST00000587580	ATP7B	P35670	1465 aa		33.59	■■■□□ 2.97
CHAF1A-205	ENST00000587580	KRT28	Q7Z3Y7	464 aa		33.58	■■■□□ 2.97
CHAF1A-205	ENST00000587580	CDK19	Q9BWU1	502 aa		33.56	■■■□□ 2.96
CHAF1A-205	ENST00000587580	GPRASP1	Q5JY77	1395 aa		33.56	■■■□□ 2.96
CHAF1A-205	ENST00000587580	RALGAPB	Q86X10	1494 aa		33.55	■■■□□ 2.96
CHAF1A-205	ENST00000587580	SPATA31A3	Q5VYP0	1347 aa		33.53	■■■□□ 2.96
CHAF1A-205	ENST00000587580	PSME1	Q06323	249 aa		33.53	■■■□□ 2.96
CHAF1A-205	ENST00000587580	NUDT16	Q96DE0	195 aa	Known RBP	33.53	■■■□□ 2.96
CHAF1A-205	ENST00000587580	TNS3	Q68CZ2	1445 aa		33.53	■■■□□ 2.96
CHAF1A-205	ENST00000587580	TOPAZ1	Q8N9V7	1692 aa		33.52	■■■□□ 2.96
CHAF1A-205	ENST00000587580	POTEA	Q6S8J7	498 aa		33.51	■■■□□ 2.95
CHAF1A-205	ENST00000587580	SBNO1	A3KN83	1393 aa		33.49	■■■□□ 2.95
CHAF1A-205	ENST00000587580	ADAMTS2	O95450	1211 aa		33.49	■■■□□ 2.95
CHAF1A-205	ENST00000587580	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.48	■■■□□ 2.95
CHAF1A-205	ENST00000587580	C8orf37	Q96NL8	207 aa		33.47	■■■□□ 2.95
CHAF1A-205	ENST00000587580	CARD11	Q9BXL7	1154 aa		33.47	■■■□□ 2.95
CHAF1A-205	ENST00000587580	SRPK2	P78362	688 aa	Known RBP	33.46	■■■□□ 2.95
CHAF1A-205	ENST00000587580	ZNF772	Q68DY9	489 aa	Predicted RBP	33.46	■■■□□ 2.95
CHAF1A-205	ENST00000587580	NGDN	Q8NEJ9	315 aa	Known RBP	33.46	■■■□□ 2.95
CHAF1A-205	ENST00000587580	CLSPN	Q9HAW4	1339 aa		33.46	■■■□□ 2.95
CHAF1A-205	ENST00000587580	AFF2	P51816	1311 aa		33.45	■■■□□ 2.95
CHAF1A-205	ENST00000587580	SOCS7	O14512	581 aa		33.43	■■■□□ 2.94
CHAF1A-205	ENST00000587580	LMOD2	Q6P5Q4	547 aa		33.42	■■■□□ 2.94
CHAF1A-205	ENST00000587580	CABP2	Q9NPB3	220 aa		33.42	■■■□□ 2.94
CHAF1A-205	ENST00000587580	CCDC61	Q9Y6R9	512 aa		33.42	■■■□□ 2.94
CHAF1A-205	ENST00000587580	MARF1	Q9Y4F3	1742 aa	Known RBP	33.42	■■■□□ 2.94
CHAF1A-205	ENST00000587580	ARHGEF10	O15013	1369 aa		33.41	■■■□□ 2.94
CHAF1A-205	ENST00000587580	ALS2	Q96Q42	1657 aa		33.39	■■■□□ 2.94
CHAF1A-205	ENST00000587580	EVC2	Q86UK5	1308 aa		33.38	■■■□□ 2.93
CHAF1A-205	ENST00000587580	NGLY1	Q96IV0	654 aa		33.38	■■■□□ 2.93
CHAF1A-205	ENST00000587580	PPIP5K1	Q6PFW1	1433 aa		33.37	■■■□□ 2.93
CHAF1A-205	ENST00000587580	ABCA3	Q99758	1704 aa		33.37	■■■□□ 2.93
CHAF1A-205	ENST00000587580	POLR3A	O14802	1390 aa	Predicted RBP	33.36	■■■□□ 2.93
CHAF1A-205	ENST00000587580	ACE	P12821	1306 aa		33.35	■■■□□ 2.93
CHAF1A-205	ENST00000587580	PLEKHG3	A1L390	1219 aa		33.34	■■■□□ 2.93
CHAF1A-205	ENST00000587580	PLEKHG5	O94827	1062 aa		33.34	■■■□□ 2.93
CHAF1A-205	ENST00000587580	HAP1	P54257	671 aa	Predicted RBP	33.33	■■■□□ 2.93
CHAF1A-205	ENST00000587580	CCER1	Q8TC90	406 aa	Predicted RBP	33.33	■■■□□ 2.93
CHAF1A-205	ENST00000587580	PAK3	O75914	559 aa	Predicted RBP	33.32	■■■□□ 2.92
CHAF1A-205	ENST00000587580	CABLES1	Q8TDN4	633 aa		33.32	■■■□□ 2.92
CHAF1A-205	ENST00000587580	SBNO2	Q9Y2G9	1366 aa		33.32	■■■□□ 2.92
CHAF1A-205	ENST00000587580	TIMELESS	Q9UNS1	1208 aa		33.3	■■■□□ 2.92
CHAF1A-205	ENST00000587580	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.27	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms