RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
PRKCSH-206ENST00000587509 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-206ENST00000587509 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
PRKCSH-206ENST00000587509 POGKQ9P215 609 aa16.91■□□□□ 0.3
PRKCSH-206ENST00000587509 NHSL1Q5SYE7 1610 aa16.91■□□□□ 0.3
PRKCSH-206ENST00000587509 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
PRKCSH-206ENST00000587509 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
PRKCSH-206ENST00000587509 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
PRKCSH-206ENST00000587509 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
PRKCSH-206ENST00000587509 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
PRKCSH-206ENST00000587509 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
PRKCSH-206ENST00000587509 KIF1AQ12756 1690 aa16.87■□□□□ 0.29
PRKCSH-206ENST00000587509 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
PRKCSH-206ENST00000587509 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
PRKCSH-206ENST00000587509 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-206ENST00000587509 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
PRKCSH-206ENST00000587509 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
PRKCSH-206ENST00000587509 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
PRKCSH-206ENST00000587509 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
PRKCSH-206ENST00000587509 ARHGEF28Q8N1W1 1705 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-206ENST00000587509 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
PRKCSH-206ENST00000587509 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKCSH-206ENST00000587509 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
PRKCSH-206ENST00000587509 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
PRKCSH-206ENST00000587509 ORAI2Q96SN7 254 aa16.81■□□□□ 0.28
PRKCSH-206ENST00000587509 SOS2Q07890 1332 aaPredicted RBP16.79■□□□□ 0.28
PRKCSH-206ENST00000587509 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
PRKCSH-206ENST00000587509 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
PRKCSH-206ENST00000587509 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
PRKCSH-206ENST00000587509 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-206ENST00000587509 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
PRKCSH-206ENST00000587509 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-206ENST00000587509 PXDNQ92626 1479 aa16.76■□□□□ 0.27
PRKCSH-206ENST00000587509 TRPM1Q7Z4N2 1603 aa16.76■□□□□ 0.27
PRKCSH-206ENST00000587509 DDX17Q92841 729 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-206ENST00000587509 PHF8Q9UPP1 1060 aa16.75■□□□□ 0.27
PRKCSH-206ENST00000587509 ITSN1Q15811 1721 aa16.75■□□□□ 0.27
PRKCSH-206ENST00000587509 LRP6O75581 1613 aa16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 FOXO3O43524 673 aa16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 PSME1Q06323 249 aa16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-206ENST00000587509 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-206ENST00000587509 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-206ENST00000587509 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-206ENST00000587509 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
PRKCSH-206ENST00000587509 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-206ENST00000587509 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
PRKCSH-206ENST00000587509 ZNF772Q68DY9 489 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-206ENST00000587509 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
PRKCSH-206ENST00000587509 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
PRKCSH-206ENST00000587509 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 ATP7BP35670 1465 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 ILDR2Q71H61 639 aa16.7■□□□□ 0.26
PRKCSH-206ENST00000587509 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
PRKCSH-206ENST00000587509 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-206ENST00000587509 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
PRKCSH-206ENST00000587509 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
PRKCSH-206ENST00000587509 RGPD8O14715 1765 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-206ENST00000587509 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-206ENST00000587509 SPATA31A3Q5VYP0 1347 aa16.67■□□□□ 0.26
PRKCSH-206ENST00000587509 SOCS7O14512 581 aa16.66■□□□□ 0.26
PRKCSH-206ENST00000587509 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-206ENST00000587509 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-206ENST00000587509 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 CDK19Q9BWU1 502 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
PRKCSH-206ENST00000587509 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
PRKCSH-206ENST00000587509 PRR36Q9H6K5 1346 aa16.64■□□□□ 0.25
PRKCSH-206ENST00000587509 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
PRKCSH-206ENST00000587509 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-206ENST00000587509 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
PRKCSH-206ENST00000587509 AFF2P51816 1311 aa16.63■□□□□ 0.25
PRKCSH-206ENST00000587509 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
PRKCSH-206ENST00000587509 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
PRKCSH-206ENST00000587509 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
PRKCSH-206ENST00000587509 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
PRKCSH-206ENST00000587509 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
PRKCSH-206ENST00000587509 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-206ENST00000587509 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
PRKCSH-206ENST00000587509 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
PRKCSH-206ENST00000587509 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-206ENST00000587509 POTEAQ6S8J7 498 aa16.59■□□□□ 0.25
PRKCSH-206ENST00000587509 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-206ENST00000587509 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-206ENST00000587509 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-206ENST00000587509 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-206ENST00000587509 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
PRKCSH-206ENST00000587509 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
PRKCSH-206ENST00000587509 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
PRKCSH-206ENST00000587509 RXRBP28702 533 aa16.57■□□□□ 0.24
PRKCSH-206ENST00000587509 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms