RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 NHSL1Q5SYE7 1610 aa34.07■■■■□ 3.04
LSM7-204ENST00000587502 DCAF11Q8TEB1 546 aa34.05■■■■□ 3.04
LSM7-204ENST00000587502 CDC42BPGQ6DT37 1551 aa34.05■■■■□ 3.04
LSM7-204ENST00000587502 SHPRHQ149N8 1683 aa34.05■■■■□ 3.04
LSM7-204ENST00000587502 RGS17Q9UGC6 210 aaPredicted RBP34.04■■■■□ 3.04
LSM7-204ENST00000587502 KDM2AQ9Y2K7 1162 aa34.02■■■■□ 3.04
LSM7-204ENST00000587502 ORAI2Q96SN7 254 aa34■■■■□ 3.03
LSM7-204ENST00000587502 PLEKHH1Q9ULM0 1364 aa33.98■■■■□ 3.03
LSM7-204ENST00000587502 MEX3CQ5U5Q3 659 aaKnown RBP33.97■■■■□ 3.03
LSM7-204ENST00000587502 DDX17Q92841 729 aaKnown RBP33.96■■■■□ 3.03
LSM7-204ENST00000587502 ESCO1Q5FWF5 840 aa33.95■■■■□ 3.03
LSM7-204ENST00000587502 SOS2Q07890 1332 aaPredicted RBP33.93■■■■□ 3.02
LSM7-204ENST00000587502 DLC1Q96QB1 1528 aa33.92■■■■□ 3.02
LSM7-204ENST00000587502 LRP6O75581 1613 aa33.92■■■■□ 3.02
LSM7-204ENST00000587502 NPHP3Q7Z494 1330 aa33.91■■■■□ 3.02
LSM7-204ENST00000587502 PRAM1Q96QH2 718 aa33.91■■■■□ 3.02
LSM7-204ENST00000587502 POGKQ9P215 609 aa33.9■■■■□ 3.02
LSM7-204ENST00000587502 ADGRB1O14514 1584 aa33.89■■■■□ 3.02
LSM7-204ENST00000587502 NUTM2BA6NNL0 878 aaPredicted RBP33.88■■■■□ 3.01
LSM7-204ENST00000587502 NUTM2EB1AL46 878 aaPredicted RBP33.88■■■■□ 3.01
LSM7-204ENST00000587502 NUTM2AQ8IVF1 878 aaPredicted RBP33.88■■■■□ 3.01
LSM7-204ENST00000587502 PNPLA6Q8IY17 1366 aa33.87■■■■□ 3.01
LSM7-204ENST00000587502 POTEAQ6S8J7 498 aa33.87■■■■□ 3.01
LSM7-204ENST00000587502 NUTM2FA1L443 756 aa33.85■■■■□ 3.01
LSM7-204ENST00000587502 ZNF772Q68DY9 489 aaPredicted RBP33.85■■■■□ 3.01
LSM7-204ENST00000587502 TRAK1Q9UPV9 953 aa33.84■■■■□ 3.01
LSM7-204ENST00000587502 FMN2Q9NZ56 1722 aa33.84■■■■□ 3.01
LSM7-204ENST00000587502 SAFB2Q14151 953 aaKnown RBP eCLIP33.82■■■■□ 3
LSM7-204ENST00000587502 FOXO3O43524 673 aa33.81■■■■□ 3
LSM7-204ENST00000587502 KIF1AQ12756 1690 aa33.76■■■□□ 2.99
LSM7-204ENST00000587502 PXDNQ92626 1479 aa33.76■■■□□ 2.99
LSM7-204ENST00000587502 TRIM26Q12899 539 aaPredicted RBP33.74■■■□□ 2.99
LSM7-204ENST00000587502 ADGRB2O60241 1585 aa33.73■■■□□ 2.99
LSM7-204ENST00000587502 PHF8Q9UPP1 1060 aa33.73■■■□□ 2.99
LSM7-204ENST00000587502 EIF3AQ14152 1382 aaKnown RBP33.72■■■□□ 2.99
LSM7-204ENST00000587502 ANKARQ7Z5J8 1434 aa33.71■■■□□ 2.99
LSM7-204ENST00000587502 KIAA1210Q9ULL0 1709 aa33.71■■■□□ 2.99
LSM7-204ENST00000587502 XPCQ01831 940 aaPredicted RBP33.7■■■□□ 2.99
LSM7-204ENST00000587502 AFF2P51816 1311 aa33.7■■■□□ 2.99
LSM7-204ENST00000587502 C8orf37Q96NL8 207 aa33.69■■■□□ 2.98
LSM7-204ENST00000587502 COL22A1Q8NFW1 1626 aaPredicted RBP33.68■■■□□ 2.98
LSM7-204ENST00000587502 PSME1Q06323 249 aa33.68■■■□□ 2.98
LSM7-204ENST00000587502 MINK1Q8N4C8 1332 aaPredicted RBP33.68■■■□□ 2.98
LSM7-204ENST00000587502 KRT28Q7Z3Y7 464 aa33.67■■■□□ 2.98
LSM7-204ENST00000587502 HIRIP3Q9BW71 556 aaPredicted RBP33.67■■■□□ 2.98
LSM7-204ENST00000587502 ADAMTS2O95450 1211 aa33.66■■■□□ 2.98
LSM7-204ENST00000587502 WASLO00401 505 aaPredicted RBP33.65■■■□□ 2.98
LSM7-204ENST00000587502 RGPD8O14715 1765 aaPredicted RBP33.65■■■□□ 2.98
LSM7-204ENST00000587502 NGLY1Q96IV0 654 aa33.64■■■□□ 2.98
LSM7-204ENST00000587502 SPATA31A3Q5VYP0 1347 aa33.63■■■□□ 2.97
LSM7-204ENST00000587502 RXRBP28702 533 aa33.63■■■□□ 2.97
LSM7-204ENST00000587502 ARHGEF28Q8N1W1 1705 aaKnown RBP33.62■■■□□ 2.97
LSM7-204ENST00000587502 L3MBTL2Q969R5 705 aa33.62■■■□□ 2.97
LSM7-204ENST00000587502 SIN3AQ96ST3 1273 aa33.61■■■□□ 2.97
LSM7-204ENST00000587502 TULP4Q9NRJ4 1543 aa33.58■■■□□ 2.97
LSM7-204ENST00000587502 NEUROD1Q13562 356 aa33.58■■■□□ 2.97
LSM7-204ENST00000587502 NBPF1Q3BBV0 1214 aa33.58■■■□□ 2.97
LSM7-204ENST00000587502 USP32Q8NFA0 1604 aa33.57■■■□□ 2.97
LSM7-204ENST00000587502 SBNO1A3KN83 1393 aa33.57■■■□□ 2.96
LSM7-204ENST00000587502 PMFBP1Q8TBY8 1022 aa33.56■■■□□ 2.96
LSM7-204ENST00000587502 QTRT2Q9H974 415 aaKnown RBP33.56■■■□□ 2.96
LSM7-204ENST00000587502 TNS3Q68CZ2 1445 aa33.54■■■□□ 2.96
LSM7-204ENST00000587502 FNBP4Q8N3X1 1017 aaPredicted RBP33.54■■■□□ 2.96
LSM7-204ENST00000587502 PRR36Q9H6K5 1346 aa33.53■■■□□ 2.96
LSM7-204ENST00000587502 CDK12Q9NYV4 1490 aaPredicted RBP33.52■■■□□ 2.96
LSM7-204ENST00000587502 USP21Q9UK80 565 aa33.52■■■□□ 2.96
LSM7-204ENST00000587502 ARHGEF10O15013 1369 aa33.51■■■□□ 2.96
LSM7-204ENST00000587502 GPRASP1Q5JY77 1395 aa33.51■■■□□ 2.96
LSM7-204ENST00000587502 RBM6P78332 1123 aaKnown RBP33.51■■■□□ 2.95
LSM7-204ENST00000587502 NUDT16Q96DE0 195 aaKnown RBP33.48■■■□□ 2.95
LSM7-204ENST00000587502 CDK19Q9BWU1 502 aa33.48■■■□□ 2.95
LSM7-204ENST00000587502 NGDNQ8NEJ9 315 aaKnown RBP33.47■■■□□ 2.95
LSM7-204ENST00000587502 TRPC5Q9UL62 973 aaPredicted RBP33.47■■■□□ 2.95
LSM7-204ENST00000587502 HAP1P54257 671 aaPredicted RBP33.46■■■□□ 2.95
LSM7-204ENST00000587502 LMOD2Q6P5Q4 547 aa33.46■■■□□ 2.95
LSM7-204ENST00000587502 CENPJQ9HC77 1338 aaPredicted RBP33.46■■■□□ 2.95
LSM7-204ENST00000587502 MARF1Q9Y4F3 1742 aaKnown RBP33.45■■■□□ 2.95
LSM7-204ENST00000587502 ITSN1Q15811 1721 aa33.43■■■□□ 2.94
LSM7-204ENST00000587502 ATP7BP35670 1465 aa33.43■■■□□ 2.94
LSM7-204ENST00000587502 CCDC61Q9Y6R9 512 aa33.41■■■□□ 2.94
LSM7-204ENST00000587502 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.93
LSM7-204ENST00000587502 ROCK2O75116 1388 aaKnown RBP33.38■■■□□ 2.93
LSM7-204ENST00000587502 ATRNO75882 1429 aa33.37■■■□□ 2.93
LSM7-204ENST00000587502 BCL9LQ86UU0 1499 aa33.37■■■□□ 2.93
LSM7-204ENST00000587502 TRPM3Q9HCF6 1732 aaPredicted RBP33.36■■■□□ 2.93
LSM7-204ENST00000587502 CABLES1Q8TDN4 633 aa33.35■■■□□ 2.93
LSM7-204ENST00000587502 PLEKHG3A1L390 1219 aa33.34■■■□□ 2.93
LSM7-204ENST00000587502 SRPK2P78362 688 aaKnown RBP33.34■■■□□ 2.93
LSM7-204ENST00000587502 TONSLQ96HA7 1378 aa33.34■■■□□ 2.93
LSM7-204ENST00000587502 PAK3O75914 559 aaPredicted RBP33.33■■■□□ 2.93
LSM7-204ENST00000587502 UNC5CLQ8IV45 518 aa33.33■■■□□ 2.93
LSM7-204ENST00000587502 RGS12O14924 1447 aa33.32■■■□□ 2.92
LSM7-204ENST00000587502 SLIT2O94813 1529 aa33.32■■■□□ 2.92
LSM7-204ENST00000587502 POLR3AO14802 1390 aaPredicted RBP33.32■■■□□ 2.92
LSM7-204ENST00000587502 ALS2Q96Q42 1657 aa33.31■■■□□ 2.92
LSM7-204ENST00000587502 QRICH2Q9H0J4 1663 aa33.3■■■□□ 2.92
LSM7-204ENST00000587502 PLEKHG5O94827 1062 aa33.3■■■□□ 2.92
LSM7-204ENST00000587502 TOPAZ1Q8N9V7 1692 aa33.29■■■□□ 2.92
LSM7-204ENST00000587502 ACEP12821 1306 aa33.29■■■□□ 2.92
LSM7-204ENST00000587502 NBPF8Q3BBV2 869 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms