RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 MYOM2P54296 1465 aa31.77■■■□□ 2.68
PKN1-210ENST00000587429 YTHDC2Q9H6S0 1430 aaKnown RBP31.76■■■□□ 2.68
PKN1-210ENST00000587429 KNDC1Q76NI1 1749 aa31.74■■■□□ 2.67
PKN1-210ENST00000587429 LRRC59Q96AG4 307 aaKnown RBP31.72■■■□□ 2.67
PKN1-210ENST00000587429 KDM2AQ9Y2K7 1162 aa31.72■■■□□ 2.67
PKN1-210ENST00000587429 NUTM2BA6NNL0 878 aaPredicted RBP31.71■■■□□ 2.67
PKN1-210ENST00000587429 NUTM2EB1AL46 878 aaPredicted RBP31.71■■■□□ 2.67
PKN1-210ENST00000587429 NUTM2AQ8IVF1 878 aaPredicted RBP31.71■■■□□ 2.67
PKN1-210ENST00000587429 CDC42BPGQ6DT37 1551 aa31.69■■■□□ 2.66
PKN1-210ENST00000587429 MEX3CQ5U5Q3 659 aaKnown RBP31.69■■■□□ 2.66
PKN1-210ENST00000587429 DCAF11Q8TEB1 546 aa31.69■■■□□ 2.66
PKN1-210ENST00000587429 NUTM2FA1L443 756 aa31.68■■■□□ 2.66
PKN1-210ENST00000587429 DHX57Q6P158 1386 aaKnown RBP31.68■■■□□ 2.66
PKN1-210ENST00000587429 LAMC1P11047 1609 aa31.67■■■□□ 2.66
PKN1-210ENST00000587429 ESCO1Q5FWF5 840 aa31.66■■■□□ 2.66
PKN1-210ENST00000587429 SIRT1Q96EB6 747 aa31.65■■■□□ 2.66
PKN1-210ENST00000587429 PNPLA6Q8IY17 1366 aa31.64■■■□□ 2.66
PKN1-210ENST00000587429 SOS2Q07890 1332 aaPredicted RBP31.63■■■□□ 2.65
PKN1-210ENST00000587429 SAFB2Q14151 953 aaKnown RBP eCLIP31.6■■■□□ 2.65
PKN1-210ENST00000587429 PRAM1Q96QH2 718 aa31.6■■■□□ 2.65
PKN1-210ENST00000587429 ADGRB1O14514 1584 aa31.57■■■□□ 2.64
PKN1-210ENST00000587429 FOXO3O43524 673 aa31.57■■■□□ 2.64
PKN1-210ENST00000587429 FMN2Q9NZ56 1722 aa31.57■■■□□ 2.64
PKN1-210ENST00000587429 XPCQ01831 940 aaPredicted RBP31.56■■■□□ 2.64
PKN1-210ENST00000587429 TRAK1Q9UPV9 953 aa31.55■■■□□ 2.64
PKN1-210ENST00000587429 NPHP3Q7Z494 1330 aa31.53■■■□□ 2.64
PKN1-210ENST00000587429 ZNF772Q68DY9 489 aaPredicted RBP31.53■■■□□ 2.64
PKN1-210ENST00000587429 STAC3Q96MF2 364 aa31.53■■■□□ 2.64
PKN1-210ENST00000587429 POGKQ9P215 609 aa31.53■■■□□ 2.64
PKN1-210ENST00000587429 RGPD8O14715 1765 aaPredicted RBP31.53■■■□□ 2.64
PKN1-210ENST00000587429 DLC1Q96QB1 1528 aa31.52■■■□□ 2.64
PKN1-210ENST00000587429 PXDNQ92626 1479 aa31.51■■■□□ 2.63
PKN1-210ENST00000587429 AFF2P51816 1311 aa31.5■■■□□ 2.63
PKN1-210ENST00000587429 ADAMTS2O95450 1211 aa31.49■■■□□ 2.63
PKN1-210ENST00000587429 C8orf37Q96NL8 207 aa31.49■■■□□ 2.63
PKN1-210ENST00000587429 HIRIP3Q9BW71 556 aaPredicted RBP31.45■■■□□ 2.63
PKN1-210ENST00000587429 MINK1Q8N4C8 1332 aaPredicted RBP31.43■■■□□ 2.62
PKN1-210ENST00000587429 PHF8Q9UPP1 1060 aa31.42■■■□□ 2.62
PKN1-210ENST00000587429 KIF1AQ12756 1690 aa31.41■■■□□ 2.62
PKN1-210ENST00000587429 NGLY1Q96IV0 654 aa31.41■■■□□ 2.62
PKN1-210ENST00000587429 COL22A1Q8NFW1 1626 aaPredicted RBP31.41■■■□□ 2.62
PKN1-210ENST00000587429 KRT28Q7Z3Y7 464 aa31.4■■■□□ 2.62
PKN1-210ENST00000587429 RXRBP28702 533 aa31.39■■■□□ 2.62
PKN1-210ENST00000587429 USP32Q8NFA0 1604 aa31.38■■■□□ 2.61
PKN1-210ENST00000587429 ADGRB2O60241 1585 aa31.37■■■□□ 2.61
PKN1-210ENST00000587429 SPATA31A3Q5VYP0 1347 aa31.36■■■□□ 2.61
PKN1-210ENST00000587429 QTRT2Q9H974 415 aaKnown RBP31.36■■■□□ 2.61
PKN1-210ENST00000587429 PMFBP1Q8TBY8 1022 aa31.35■■■□□ 2.61
PKN1-210ENST00000587429 SIN3AQ96ST3 1273 aa31.35■■■□□ 2.61
PKN1-210ENST00000587429 ARHGEF28Q8N1W1 1705 aaKnown RBP31.35■■■□□ 2.61
PKN1-210ENST00000587429 NBPF1Q3BBV0 1214 aa31.34■■■□□ 2.61
PKN1-210ENST00000587429 PRR36Q9H6K5 1346 aa31.32■■■□□ 2.6
PKN1-210ENST00000587429 WASLO00401 505 aaPredicted RBP31.32■■■□□ 2.6
PKN1-210ENST00000587429 ANKARQ7Z5J8 1434 aa31.32■■■□□ 2.6
PKN1-210ENST00000587429 KIAA1210Q9ULL0 1709 aa31.3■■■□□ 2.6
PKN1-210ENST00000587429 PSME1Q06323 249 aa31.29■■■□□ 2.6
PKN1-210ENST00000587429 L3MBTL2Q969R5 705 aa31.29■■■□□ 2.6
PKN1-210ENST00000587429 USP21Q9UK80 565 aa31.29■■■□□ 2.6
PKN1-210ENST00000587429 FNBP4Q8N3X1 1017 aaPredicted RBP31.28■■■□□ 2.6
PKN1-210ENST00000587429 NEUROD1Q13562 356 aa31.27■■■□□ 2.6
PKN1-210ENST00000587429 MARF1Q9Y4F3 1742 aaKnown RBP31.27■■■□□ 2.6
PKN1-210ENST00000587429 RBM6P78332 1123 aaKnown RBP31.26■■■□□ 2.59
PKN1-210ENST00000587429 TULP4Q9NRJ4 1543 aa31.25■■■□□ 2.59
PKN1-210ENST00000587429 PLEKHG5O94827 1062 aa31.25■■■□□ 2.59
PKN1-210ENST00000587429 TNS3Q68CZ2 1445 aa31.24■■■□□ 2.59
PKN1-210ENST00000587429 LMOD2Q6P5Q4 547 aa31.23■■■□□ 2.59
PKN1-210ENST00000587429 CABLES1Q8TDN4 633 aa31.23■■■□□ 2.59
PKN1-210ENST00000587429 CDK12Q9NYV4 1490 aaPredicted RBP31.22■■■□□ 2.59
PKN1-210ENST00000587429 SBNO1A3KN83 1393 aa31.22■■■□□ 2.59
PKN1-210ENST00000587429 EIF3AQ14152 1382 aaKnown RBP31.22■■■□□ 2.59
PKN1-210ENST00000587429 NUDT16Q96DE0 195 aaKnown RBP31.19■■■□□ 2.58
PKN1-210ENST00000587429 CDK19Q9BWU1 502 aa31.19■■■□□ 2.58
PKN1-210ENST00000587429 TRPC5Q9UL62 973 aaPredicted RBP31.19■■■□□ 2.58
PKN1-210ENST00000587429 BCL9LQ86UU0 1499 aa31.18■■■□□ 2.58
PKN1-210ENST00000587429 RGS12O14924 1447 aa31.17■■■□□ 2.58
PKN1-210ENST00000587429 TRPM3Q9HCF6 1732 aaPredicted RBP31.16■■■□□ 2.58
PKN1-210ENST00000587429 ATRNO75882 1429 aa31.15■■■□□ 2.58
PKN1-210ENST00000587429 NGDNQ8NEJ9 315 aaKnown RBP31.15■■■□□ 2.58
PKN1-210ENST00000587429 GPRASP1Q5JY77 1395 aa31.15■■■□□ 2.58
PKN1-210ENST00000587429 ATP7BP35670 1465 aa31.14■■■□□ 2.58
PKN1-210ENST00000587429 HAP1P54257 671 aaPredicted RBP31.14■■■□□ 2.58
PKN1-210ENST00000587429 UPF1Q92900 1129 aaKnown RBP eCLIP31.14■■■□□ 2.58
PKN1-210ENST00000587429 ARHGEF10O15013 1369 aa31.14■■■□□ 2.58
PKN1-210ENST00000587429 ITSN1Q15811 1721 aa31.1■■■□□ 2.57
PKN1-210ENST00000587429 ABCA3Q99758 1704 aa31.1■■■□□ 2.57
PKN1-210ENST00000587429 ALS2Q96Q42 1657 aa31.09■■■□□ 2.57
PKN1-210ENST00000587429 CENPJQ9HC77 1338 aaPredicted RBP31.09■■■□□ 2.57
PKN1-210ENST00000587429 SLIT2O94813 1529 aa31.08■■■□□ 2.57
PKN1-210ENST00000587429 PAK3O75914 559 aaPredicted RBP31.08■■■□□ 2.57
PKN1-210ENST00000587429 TRIM26Q12899 539 aaPredicted RBP31.08■■■□□ 2.57
PKN1-210ENST00000587429 TRPM1Q7Z4N2 1603 aa31.07■■■□□ 2.56
PKN1-210ENST00000587429 UNC5CLQ8IV45 518 aa31.07■■■□□ 2.56
PKN1-210ENST00000587429 GJD4Q96KN9 370 aaPredicted RBP31.05■■■□□ 2.56
PKN1-210ENST00000587429 CCDC61Q9Y6R9 512 aa31.05■■■□□ 2.56
PKN1-210ENST00000587429 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.04■■■□□ 2.56
PKN1-210ENST00000587429 NBPF8Q3BBV2 869 aa31.04■■■□□ 2.56
PKN1-210ENST00000587429 TOPAZ1Q8N9V7 1692 aa31.03■■■□□ 2.56
PKN1-210ENST00000587429 FAM83GA6ND36 823 aa31.03■■■□□ 2.56
PKN1-210ENST00000587429 QRICH2Q9H0J4 1663 aa31.03■■■□□ 2.56
PKN1-210ENST00000587429 ACEP12821 1306 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms