RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 SPATA31A6Q5VVP1 1343 aa29.33■■■□□ 2.29
VAT1-203ENST00000587062 COL16A1Q07092 1604 aaPredicted RBP29.33■■■□□ 2.29
VAT1-203ENST00000587062 CDC42BPGQ6DT37 1551 aa29.31■■■□□ 2.28
VAT1-203ENST00000587062 ILDR2Q71H61 639 aa29.3■■■□□ 2.28
VAT1-203ENST00000587062 ESCO1Q5FWF5 840 aa29.29■■■□□ 2.28
VAT1-203ENST00000587062 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
VAT1-203ENST00000587062 ORAI2Q96SN7 254 aa29.27■■■□□ 2.28
VAT1-203ENST00000587062 TRAK1Q9UPV9 953 aa29.26■■■□□ 2.27
VAT1-203ENST00000587062 NHSL1Q5SYE7 1610 aa29.26■■■□□ 2.27
VAT1-203ENST00000587062 PLEKHH1Q9ULM0 1364 aa29.26■■■□□ 2.27
VAT1-203ENST00000587062 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
VAT1-203ENST00000587062 MEX3CQ5U5Q3 659 aaKnown RBP29.25■■■□□ 2.27
VAT1-203ENST00000587062 NPHP3Q7Z494 1330 aa29.22■■■□□ 2.27
VAT1-203ENST00000587062 SHPRHQ149N8 1683 aa29.22■■■□□ 2.27
VAT1-203ENST00000587062 SAFB2Q14151 953 aaKnown RBP eCLIP29.22■■■□□ 2.27
VAT1-203ENST00000587062 NUTM2FA1L443 756 aa29.21■■■□□ 2.27
VAT1-203ENST00000587062 ADGRB1O14514 1584 aa29.21■■■□□ 2.27
VAT1-203ENST00000587062 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
VAT1-203ENST00000587062 DDX17Q92841 729 aaKnown RBP29.19■■■□□ 2.26
VAT1-203ENST00000587062 SOCS7O14512 581 aa29.17■■■□□ 2.26
VAT1-203ENST00000587062 SOS2Q07890 1332 aaPredicted RBP29.17■■■□□ 2.26
VAT1-203ENST00000587062 NUTM2BA6NNL0 878 aaPredicted RBP29.16■■■□□ 2.26
VAT1-203ENST00000587062 NUTM2EB1AL46 878 aaPredicted RBP29.16■■■□□ 2.26
VAT1-203ENST00000587062 NUTM2AQ8IVF1 878 aaPredicted RBP29.16■■■□□ 2.26
VAT1-203ENST00000587062 EIF3AQ14152 1382 aaKnown RBP29.15■■■□□ 2.26
VAT1-203ENST00000587062 SIN3AQ96ST3 1273 aa29.15■■■□□ 2.26
VAT1-203ENST00000587062 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.26
VAT1-203ENST00000587062 KIAA1210Q9ULL0 1709 aa29.14■■■□□ 2.26
VAT1-203ENST00000587062 FOXO3O43524 673 aa29.14■■■□□ 2.26
VAT1-203ENST00000587062 L3MBTL2Q969R5 705 aa29.13■■■□□ 2.25
VAT1-203ENST00000587062 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
VAT1-203ENST00000587062 MINK1Q8N4C8 1332 aaPredicted RBP29.1■■■□□ 2.25
VAT1-203ENST00000587062 PNPLA6Q8IY17 1366 aa29.1■■■□□ 2.25
VAT1-203ENST00000587062 PSME1Q06323 249 aa29.09■■■□□ 2.25
VAT1-203ENST00000587062 PHF8Q9UPP1 1060 aa29.09■■■□□ 2.25
VAT1-203ENST00000587062 KIF1AQ12756 1690 aa29.09■■■□□ 2.25
VAT1-203ENST00000587062 RGS17Q9UGC6 210 aaPredicted RBP29.08■■■□□ 2.25
VAT1-203ENST00000587062 ANKARQ7Z5J8 1434 aa29.07■■■□□ 2.24
VAT1-203ENST00000587062 HIRIP3Q9BW71 556 aaPredicted RBP29.07■■■□□ 2.24
VAT1-203ENST00000587062 ADGRB2O60241 1585 aa29.06■■■□□ 2.24
VAT1-203ENST00000587062 WASLO00401 505 aaPredicted RBP29.06■■■□□ 2.24
VAT1-203ENST00000587062 LRP6O75581 1613 aa29.05■■■□□ 2.24
VAT1-203ENST00000587062 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
VAT1-203ENST00000587062 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
VAT1-203ENST00000587062 XPCQ01831 940 aaPredicted RBP29.02■■■□□ 2.24
VAT1-203ENST00000587062 ARHGEF28Q8N1W1 1705 aaKnown RBP29.01■■■□□ 2.23
VAT1-203ENST00000587062 PXDNQ92626 1479 aa29■■■□□ 2.23
VAT1-203ENST00000587062 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
VAT1-203ENST00000587062 TONSLQ96HA7 1378 aa28.99■■■□□ 2.23
VAT1-203ENST00000587062 RGPD8O14715 1765 aaPredicted RBP28.98■■■□□ 2.23
VAT1-203ENST00000587062 C8orf37Q96NL8 207 aa28.98■■■□□ 2.23
VAT1-203ENST00000587062 PMFBP1Q8TBY8 1022 aa28.97■■■□□ 2.23
VAT1-203ENST00000587062 TULP4Q9NRJ4 1543 aa28.97■■■□□ 2.23
VAT1-203ENST00000587062 ADAMTS2O95450 1211 aa28.96■■■□□ 2.23
VAT1-203ENST00000587062 NGLY1Q96IV0 654 aa28.96■■■□□ 2.23
VAT1-203ENST00000587062 SPATA31A3Q5VYP0 1347 aa28.95■■■□□ 2.23
VAT1-203ENST00000587062 CENPJQ9HC77 1338 aaPredicted RBP28.95■■■□□ 2.23
VAT1-203ENST00000587062 GPRASP1Q5JY77 1395 aa28.95■■■□□ 2.22
VAT1-203ENST00000587062 AFF2P51816 1311 aa28.94■■■□□ 2.22
VAT1-203ENST00000587062 ROCK2O75116 1388 aaKnown RBP28.93■■■□□ 2.22
VAT1-203ENST00000587062 NGDNQ8NEJ9 315 aaKnown RBP28.93■■■□□ 2.22
VAT1-203ENST00000587062 CDK19Q9BWU1 502 aa28.93■■■□□ 2.22
VAT1-203ENST00000587062 COL22A1Q8NFW1 1626 aaPredicted RBP28.93■■■□□ 2.22
VAT1-203ENST00000587062 HAP1P54257 671 aaPredicted RBP28.92■■■□□ 2.22
VAT1-203ENST00000587062 NUDT16Q96DE0 195 aaKnown RBP28.92■■■□□ 2.22
VAT1-203ENST00000587062 LMOD2Q6P5Q4 547 aa28.91■■■□□ 2.22
VAT1-203ENST00000587062 SBNO1A3KN83 1393 aa28.9■■■□□ 2.22
VAT1-203ENST00000587062 USP32Q8NFA0 1604 aa28.9■■■□□ 2.22
VAT1-203ENST00000587062 ARHGEF10O15013 1369 aa28.88■■■□□ 2.21
VAT1-203ENST00000587062 TRPM1Q7Z4N2 1603 aa28.88■■■□□ 2.21
VAT1-203ENST00000587062 RXRBP28702 533 aa28.88■■■□□ 2.21
VAT1-203ENST00000587062 PRR36Q9H6K5 1346 aa28.88■■■□□ 2.21
VAT1-203ENST00000587062 TNS3Q68CZ2 1445 aa28.87■■■□□ 2.21
VAT1-203ENST00000587062 ITSN1Q15811 1721 aa28.87■■■□□ 2.21
VAT1-203ENST00000587062 SRPK2P78362 688 aaKnown RBP28.87■■■□□ 2.21
VAT1-203ENST00000587062 CCDC61Q9Y6R9 512 aa28.87■■■□□ 2.21
VAT1-203ENST00000587062 QTRT2Q9H974 415 aaKnown RBP28.85■■■□□ 2.21
VAT1-203ENST00000587062 USP21Q9UK80 565 aa28.83■■■□□ 2.21
VAT1-203ENST00000587062 ATP7BP35670 1465 aa28.81■■■□□ 2.2
VAT1-203ENST00000587062 EVC2Q86UK5 1308 aa28.81■■■□□ 2.2
VAT1-203ENST00000587062 PAK3O75914 559 aaPredicted RBP28.81■■■□□ 2.2
VAT1-203ENST00000587062 NBPF8Q3BBV2 869 aa28.8■■■□□ 2.2
VAT1-203ENST00000587062 FNBP4Q8N3X1 1017 aaPredicted RBP28.8■■■□□ 2.2
VAT1-203ENST00000587062 CARD11Q9BXL7 1154 aa28.8■■■□□ 2.2
VAT1-203ENST00000587062 RBM6P78332 1123 aaKnown RBP28.79■■■□□ 2.2
VAT1-203ENST00000587062 TRPC5Q9UL62 973 aaPredicted RBP28.79■■■□□ 2.2
VAT1-203ENST00000587062 QRICH2Q9H0J4 1663 aa28.78■■■□□ 2.2
VAT1-203ENST00000587062 PCGF6Q9BYE7 350 aa28.78■■■□□ 2.2
VAT1-203ENST00000587062 PLEKHG3A1L390 1219 aa28.77■■■□□ 2.2
VAT1-203ENST00000587062 MARF1Q9Y4F3 1742 aaKnown RBP28.75■■■□□ 2.19
VAT1-203ENST00000587062 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
VAT1-203ENST00000587062 CABP2Q9NPB3 220 aa28.75■■■□□ 2.19
VAT1-203ENST00000587062 ACEP12821 1306 aa28.74■■■□□ 2.19
VAT1-203ENST00000587062 CLSPNQ9HAW4 1339 aa28.74■■■□□ 2.19
VAT1-203ENST00000587062 CDK12Q9NYV4 1490 aaPredicted RBP28.72■■■□□ 2.19
VAT1-203ENST00000587062 CABLES1Q8TDN4 633 aa28.72■■■□□ 2.19
VAT1-203ENST00000587062 POLR3AO14802 1390 aaPredicted RBP28.72■■■□□ 2.19
VAT1-203ENST00000587062 PPIP5K1Q6PFW1 1433 aa28.7■■■□□ 2.19
VAT1-203ENST00000587062 TRPM3Q9HCF6 1732 aaPredicted RBP28.7■■■□□ 2.19
VAT1-203ENST00000587062 TIMELESSQ9UNS1 1208 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms