RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
ATG4D-205ENST00000586477 JCADQ9P266 1359 aa23.27■■□□□ 1.32
ATG4D-205ENST00000586477 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
ATG4D-205ENST00000586477 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
ATG4D-205ENST00000586477 SHPRHQ149N8 1683 aa23.26■■□□□ 1.31
ATG4D-205ENST00000586477 ADGRB1O14514 1584 aa23.24■■□□□ 1.31
ATG4D-205ENST00000586477 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
ATG4D-205ENST00000586477 LRP6O75581 1613 aa23.23■■□□□ 1.31
ATG4D-205ENST00000586477 ORAI2Q96SN7 254 aa23.21■■□□□ 1.31
ATG4D-205ENST00000586477 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
ATG4D-205ENST00000586477 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
ATG4D-205ENST00000586477 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
ATG4D-205ENST00000586477 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
ATG4D-205ENST00000586477 SIRT1Q96EB6 747 aa23.18■■□□□ 1.3
ATG4D-205ENST00000586477 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
ATG4D-205ENST00000586477 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
ATG4D-205ENST00000586477 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
ATG4D-205ENST00000586477 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
ATG4D-205ENST00000586477 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
ATG4D-205ENST00000586477 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
ATG4D-205ENST00000586477 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-205ENST00000586477 SOS2Q07890 1332 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-205ENST00000586477 POTEAQ6S8J7 498 aa23.12■■□□□ 1.29
ATG4D-205ENST00000586477 PNPLA6Q8IY17 1366 aa23.12■■□□□ 1.29
ATG4D-205ENST00000586477 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
ATG4D-205ENST00000586477 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
ATG4D-205ENST00000586477 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
ATG4D-205ENST00000586477 PXDNQ92626 1479 aa23.09■■□□□ 1.29
ATG4D-205ENST00000586477 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
ATG4D-205ENST00000586477 ESCO1Q5FWF5 840 aa23.08■■□□□ 1.29
ATG4D-205ENST00000586477 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
ATG4D-205ENST00000586477 ADGRB2O60241 1585 aa23.08■■□□□ 1.29
ATG4D-205ENST00000586477 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
ATG4D-205ENST00000586477 USP32Q8NFA0 1604 aa23.08■■□□□ 1.28
ATG4D-205ENST00000586477 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
ATG4D-205ENST00000586477 KIAA1210Q9ULL0 1709 aa23.07■■□□□ 1.28
ATG4D-205ENST00000586477 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-205ENST00000586477 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-205ENST00000586477 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-205ENST00000586477 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-205ENST00000586477 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-205ENST00000586477 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
ATG4D-205ENST00000586477 FOXO3O43524 673 aa23.02■■□□□ 1.28
ATG4D-205ENST00000586477 L3MBTL2Q969R5 705 aa23.02■■□□□ 1.28
ATG4D-205ENST00000586477 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-205ENST00000586477 POGKQ9P215 609 aa23.01■■□□□ 1.27
ATG4D-205ENST00000586477 NPHP3Q7Z494 1330 aa23.01■■□□□ 1.27
ATG4D-205ENST00000586477 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
ATG4D-205ENST00000586477 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-205ENST00000586477 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-205ENST00000586477 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
ATG4D-205ENST00000586477 PRR36Q9H6K5 1346 aa22.96■■□□□ 1.27
ATG4D-205ENST00000586477 ANKARQ7Z5J8 1434 aa22.96■■□□□ 1.27
ATG4D-205ENST00000586477 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
ATG4D-205ENST00000586477 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
ATG4D-205ENST00000586477 AFF2P51816 1311 aa22.93■■□□□ 1.26
ATG4D-205ENST00000586477 SPATA31A3Q5VYP0 1347 aa22.91■■□□□ 1.26
ATG4D-205ENST00000586477 TRPM1Q7Z4N2 1603 aa22.91■■□□□ 1.26
ATG4D-205ENST00000586477 WASLO00401 505 aaPredicted RBP22.91■■□□□ 1.26
ATG4D-205ENST00000586477 KRT28Q7Z3Y7 464 aa22.91■■□□□ 1.26
ATG4D-205ENST00000586477 MARF1Q9Y4F3 1742 aaKnown RBP22.91■■□□□ 1.26
ATG4D-205ENST00000586477 ADAMTS2O95450 1211 aa22.9■■□□□ 1.26
ATG4D-205ENST00000586477 C8orf37Q96NL8 207 aa22.9■■□□□ 1.26
ATG4D-205ENST00000586477 TRPM3Q9HCF6 1732 aaPredicted RBP22.9■■□□□ 1.26
ATG4D-205ENST00000586477 ATP7BP35670 1465 aa22.88■■□□□ 1.25
ATG4D-205ENST00000586477 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
ATG4D-205ENST00000586477 TNS3Q68CZ2 1445 aa22.86■■□□□ 1.25
ATG4D-205ENST00000586477 RXRBP28702 533 aa22.86■■□□□ 1.25
ATG4D-205ENST00000586477 TOPAZ1Q8N9V7 1692 aa22.85■■□□□ 1.25
ATG4D-205ENST00000586477 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
ATG4D-205ENST00000586477 ABCA3Q99758 1704 aa22.85■■□□□ 1.25
ATG4D-205ENST00000586477 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
ATG4D-205ENST00000586477 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
ATG4D-205ENST00000586477 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
ATG4D-205ENST00000586477 QRICH2Q9H0J4 1663 aa22.83■■□□□ 1.24
ATG4D-205ENST00000586477 NBPF8Q3BBV2 869 aa22.82■■□□□ 1.24
ATG4D-205ENST00000586477 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
ATG4D-205ENST00000586477 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
ATG4D-205ENST00000586477 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
ATG4D-205ENST00000586477 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-205ENST00000586477 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
ATG4D-205ENST00000586477 PSME1Q06323 249 aa22.8■■□□□ 1.24
ATG4D-205ENST00000586477 QTRT2Q9H974 415 aaKnown RBP22.79■■□□□ 1.24
ATG4D-205ENST00000586477 CENPJQ9HC77 1338 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-205ENST00000586477 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
ATG4D-205ENST00000586477 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-205ENST00000586477 CABLES1Q8TDN4 633 aa22.78■■□□□ 1.24
ATG4D-205ENST00000586477 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
ATG4D-205ENST00000586477 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.24
ATG4D-205ENST00000586477 ATRNO75882 1429 aa22.76■■□□□ 1.23
ATG4D-205ENST00000586477 USP21Q9UK80 565 aa22.76■■□□□ 1.23
ATG4D-205ENST00000586477 GPRASP1Q5JY77 1395 aa22.76■■□□□ 1.23
ATG4D-205ENST00000586477 RGS12O14924 1447 aa22.75■■□□□ 1.23
ATG4D-205ENST00000586477 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.75■■□□□ 1.23
ATG4D-205ENST00000586477 ARHGEF10O15013 1369 aa22.75■■□□□ 1.23
ATG4D-205ENST00000586477 SLIT2O94813 1529 aa22.74■■□□□ 1.23
ATG4D-205ENST00000586477 RBM6P78332 1123 aaKnown RBP22.74■■□□□ 1.23
ATG4D-205ENST00000586477 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-205ENST00000586477 PLCH1Q4KWH8 1693 aa22.72■■□□□ 1.23
ATG4D-205ENST00000586477 NGDNQ8NEJ9 315 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms