RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 NALCNQ8IZF0 1738 aa30.64■■■□□ 2.5
RETREG3-202ENST00000585726 ROCK2O75116 1388 aaKnown RBP30.64■■■□□ 2.5
RETREG3-202ENST00000585726 TRPM1Q7Z4N2 1603 aa30.63■■■□□ 2.49
RETREG3-202ENST00000585726 SLAIN2Q9P270 581 aa30.63■■■□□ 2.49
RETREG3-202ENST00000585726 DLC1Q96QB1 1528 aa30.63■■■□□ 2.49
RETREG3-202ENST00000585726 TIMELESSQ9UNS1 1208 aa30.61■■■□□ 2.49
RETREG3-202ENST00000585726 DCCP43146 1447 aa30.58■■■□□ 2.49
RETREG3-202ENST00000585726 MINK1Q8N4C8 1332 aaPredicted RBP30.55■■■□□ 2.48
RETREG3-202ENST00000585726 HIRIP3Q9BW71 556 aaPredicted RBP30.54■■■□□ 2.48
RETREG3-202ENST00000585726 NUTM2FA1L443 756 aa30.53■■■□□ 2.48
RETREG3-202ENST00000585726 CARD11Q9BXL7 1154 aa30.53■■■□□ 2.48
RETREG3-202ENST00000585726 ARHGEF28Q8N1W1 1705 aaKnown RBP30.53■■■□□ 2.48
RETREG3-202ENST00000585726 MST1RQ04912 1400 aa30.52■■■□□ 2.48
RETREG3-202ENST00000585726 RALGAPBQ86X10 1494 aa30.51■■■□□ 2.48
RETREG3-202ENST00000585726 HSPA1LP34931 641 aa30.48■■■□□ 2.47
RETREG3-202ENST00000585726 CDC42BPGQ6DT37 1551 aa30.48■■■□□ 2.47
RETREG3-202ENST00000585726 ROBO1Q9Y6N7 1651 aa30.48■■■□□ 2.47
RETREG3-202ENST00000585726 GPRASP1Q5JY77 1395 aa30.47■■■□□ 2.47
RETREG3-202ENST00000585726 CENPJQ9HC77 1338 aaPredicted RBP30.47■■■□□ 2.47
RETREG3-202ENST00000585726 C1orf167Q5SNV9 1468 aa30.45■■■□□ 2.47
RETREG3-202ENST00000585726 BRINP3Q76B58 766 aa30.45■■■□□ 2.47
RETREG3-202ENST00000585726 ORAI2Q96SN7 254 aa30.43■■■□□ 2.46
RETREG3-202ENST00000585726 EIF3AQ14152 1382 aaKnown RBP30.41■■■□□ 2.46
RETREG3-202ENST00000585726 ESCO1Q5FWF5 840 aa30.41■■■□□ 2.46
RETREG3-202ENST00000585726 WASLO00401 505 aaPredicted RBP30.4■■■□□ 2.46
RETREG3-202ENST00000585726 FMN2Q9NZ56 1722 aa30.39■■■□□ 2.45
RETREG3-202ENST00000585726 ADGRB2O60241 1585 aa30.38■■■□□ 2.45
RETREG3-202ENST00000585726 DDX17Q92841 729 aaKnown RBP30.36■■■□□ 2.45
RETREG3-202ENST00000585726 CDK19Q9BWU1 502 aa30.36■■■□□ 2.45
RETREG3-202ENST00000585726 QRICH2Q9H0J4 1663 aa30.36■■■□□ 2.45
RETREG3-202ENST00000585726 SRPK2P78362 688 aaKnown RBP30.3■■■□□ 2.44
RETREG3-202ENST00000585726 PHLPP1O60346 1717 aa30.3■■■□□ 2.44
RETREG3-202ENST00000585726 PRR36Q9H6K5 1346 aa30.29■■■□□ 2.44
RETREG3-202ENST00000585726 TULP4Q9NRJ4 1543 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 ST20-MTHFSA0A0A6YYL1 179 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 FOXO3O43524 673 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 CABP2Q9NPB3 220 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 PHF8Q9UPP1 1060 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 ANKARQ7Z5J8 1434 aa30.27■■■□□ 2.44
RETREG3-202ENST00000585726 RGPD8O14715 1765 aaPredicted RBP30.26■■■□□ 2.44
RETREG3-202ENST00000585726 PMFBP1Q8TBY8 1022 aa30.26■■■□□ 2.43
RETREG3-202ENST00000585726 NUDT16Q96DE0 195 aaKnown RBP30.26■■■□□ 2.43
RETREG3-202ENST00000585726 USP47Q96K76 1375 aa30.26■■■□□ 2.43
RETREG3-202ENST00000585726 AHDC1Q5TGY3 1603 aaPredicted RBP30.25■■■□□ 2.43
RETREG3-202ENST00000585726 USP32Q8NFA0 1604 aa30.25■■■□□ 2.43
RETREG3-202ENST00000585726 EVC2Q86UK5 1308 aa30.25■■■□□ 2.43
RETREG3-202ENST00000585726 XPCQ01831 940 aaPredicted RBP30.24■■■□□ 2.43
RETREG3-202ENST00000585726 NHSL1Q5SYE7 1610 aa30.22■■■□□ 2.43
RETREG3-202ENST00000585726 NPHP3Q7Z494 1330 aa30.21■■■□□ 2.43
RETREG3-202ENST00000585726 ATP7BP35670 1465 aa30.2■■■□□ 2.43
RETREG3-202ENST00000585726 COL16A1Q07092 1604 aaPredicted RBP30.2■■■□□ 2.43
RETREG3-202ENST00000585726 KIF1AQ12756 1690 aa30.17■■■□□ 2.42
RETREG3-202ENST00000585726 SBNO2Q9Y2G9 1366 aa30.17■■■□□ 2.42
RETREG3-202ENST00000585726 CCDC61Q9Y6R9 512 aa30.17■■■□□ 2.42
RETREG3-202ENST00000585726 PSME1Q06323 249 aa30.16■■■□□ 2.42
RETREG3-202ENST00000585726 NGDNQ8NEJ9 315 aaKnown RBP30.16■■■□□ 2.42
RETREG3-202ENST00000585726 TESK2Q96S53 571 aa30.16■■■□□ 2.42
RETREG3-202ENST00000585726 SOS2Q07890 1332 aaPredicted RBP30.16■■■□□ 2.42
RETREG3-202ENST00000585726 KRT28Q7Z3Y7 464 aa30.15■■■□□ 2.42
RETREG3-202ENST00000585726 LRRC59Q96AG4 307 aaKnown RBP30.15■■■□□ 2.42
RETREG3-202ENST00000585726 JCADQ9P266 1359 aa30.13■■■□□ 2.41
RETREG3-202ENST00000585726 EIF4G2P78344 907 aaKnown RBP eCLIP30.11■■■□□ 2.41
RETREG3-202ENST00000585726 PPIP5K1Q6PFW1 1433 aa30.11■■■□□ 2.41
RETREG3-202ENST00000585726 PXDNQ92626 1479 aa30.11■■■□□ 2.41
RETREG3-202ENST00000585726 ITSN1Q15811 1721 aa30.1■■■□□ 2.41
RETREG3-202ENST00000585726 CABP1Q9NZU7 370 aa30.1■■■□□ 2.41
RETREG3-202ENST00000585726 HSPA5P11021 654 aaKnown RBP30.08■■■□□ 2.41
RETREG3-202ENST00000585726 TOPAZ1Q8N9V7 1692 aa30.07■■■□□ 2.41
RETREG3-202ENST00000585726 ACEP12821 1306 aa30.07■■■□□ 2.4
RETREG3-202ENST00000585726 PLEKHG3A1L390 1219 aa30.07■■■□□ 2.4
RETREG3-202ENST00000585726 SLC24A1O60721 1099 aa30.07■■■□□ 2.4
RETREG3-202ENST00000585726 TMF1P82094 1093 aa30.07■■■□□ 2.4
RETREG3-202ENST00000585726 ATAD2Q6PL18 1390 aa30.05■■■□□ 2.4
RETREG3-202ENST00000585726 LMOD2Q6P5Q4 547 aa30.04■■■□□ 2.4
RETREG3-202ENST00000585726 PNPLA6Q8IY17 1366 aa30.03■■■□□ 2.4
RETREG3-202ENST00000585726 DISP3Q9P2K9 1392 aa30.03■■■□□ 2.4
RETREG3-202ENST00000585726 NUTM2BA6NNL0 878 aaPredicted RBP30.03■■■□□ 2.4
RETREG3-202ENST00000585726 NUTM2EB1AL46 878 aaPredicted RBP30.03■■■□□ 2.4
RETREG3-202ENST00000585726 NUTM2AQ8IVF1 878 aaPredicted RBP30.03■■■□□ 2.4
RETREG3-202ENST00000585726 TMC1Q8TDI8 760 aa30.03■■■□□ 2.4
RETREG3-202ENST00000585726 PAK3O75914 559 aaPredicted RBP30.02■■■□□ 2.4
RETREG3-202ENST00000585726 SPATA31A3Q5VYP0 1347 aa30.01■■■□□ 2.4
RETREG3-202ENST00000585726 PLEKHG5O94827 1062 aa30.01■■■□□ 2.39
RETREG3-202ENST00000585726 POLR3AO14802 1390 aaPredicted RBP30.01■■■□□ 2.39
RETREG3-202ENST00000585726 SHPRHQ149N8 1683 aa30■■■□□ 2.39
RETREG3-202ENST00000585726 SPATA31A6Q5VVP1 1343 aa29.98■■■□□ 2.39
RETREG3-202ENST00000585726 SBNO1A3KN83 1393 aa29.98■■■□□ 2.39
RETREG3-202ENST00000585726 TNS3Q68CZ2 1445 aa29.97■■■□□ 2.39
RETREG3-202ENST00000585726 PUS7Q96PZ0 661 aaKnown RBP29.97■■■□□ 2.39
RETREG3-202ENST00000585726 SLC12A5Q9H2X9 1139 aa29.96■■■□□ 2.39
RETREG3-202ENST00000585726 POLR3GLQ9BT43 218 aa29.95■■■□□ 2.39
RETREG3-202ENST00000585726 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
RETREG3-202ENST00000585726 MED1Q15648 1581 aaPredicted RBP29.94■■■□□ 2.38
RETREG3-202ENST00000585726 MEX3CQ5U5Q3 659 aaKnown RBP29.92■■■□□ 2.38
RETREG3-202ENST00000585726 TRPM3Q9HCF6 1732 aaPredicted RBP29.92■■■□□ 2.38
RETREG3-202ENST00000585726 ARHGEF10O15013 1369 aa29.9■■■□□ 2.38
RETREG3-202ENST00000585726 LRP6O75581 1613 aa29.9■■■□□ 2.38
RETREG3-202ENST00000585726 NUTM2GQ5VZR2 741 aa29.89■■■□□ 2.38
RETREG3-202ENST00000585726 CABLES1Q8TDN4 633 aa29.89■■■□□ 2.38
RETREG3-202ENST00000585726 ZNF692Q9BU19 519 aaPredicted RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms