RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MEX3CQ5U5Q3 659 aaKnown RBP19.7■□□□□ 0.74
TRAF4-215ENST00000584944 ASXL1Q8IXJ9 1541 aa19.7■□□□□ 0.74
TRAF4-215ENST00000584944 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
TRAF4-215ENST00000584944 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
TRAF4-215ENST00000584944 POGKQ9P215 609 aa19.69■□□□□ 0.74
TRAF4-215ENST00000584944 LRPPRCP42704 1394 aaKnown RBP19.69■□□□□ 0.74
TRAF4-215ENST00000584944 YTHDC2Q9H6S0 1430 aaKnown RBP19.68■□□□□ 0.74
TRAF4-215ENST00000584944 ZNF772Q68DY9 489 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-215ENST00000584944 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
TRAF4-215ENST00000584944 NHSL1Q5SYE7 1610 aa19.66■□□□□ 0.74
TRAF4-215ENST00000584944 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
TRAF4-215ENST00000584944 ABCC11Q96J66 1382 aa19.65■□□□□ 0.74
TRAF4-215ENST00000584944 NALCNQ8IZF0 1738 aa19.65■□□□□ 0.74
TRAF4-215ENST00000584944 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
TRAF4-215ENST00000584944 LRRC59Q96AG4 307 aaKnown RBP19.64■□□□□ 0.73
TRAF4-215ENST00000584944 CARD11Q9BXL7 1154 aa19.64■□□□□ 0.73
TRAF4-215ENST00000584944 KIAA1210Q9ULL0 1709 aa19.63■□□□□ 0.73
TRAF4-215ENST00000584944 PTCH1Q13635 1447 aa19.63■□□□□ 0.73
TRAF4-215ENST00000584944 NUTM2BA6NNL0 878 aaPredicted RBP19.63■□□□□ 0.73
TRAF4-215ENST00000584944 NUTM2EB1AL46 878 aaPredicted RBP19.63■□□□□ 0.73
TRAF4-215ENST00000584944 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
TRAF4-215ENST00000584944 NUTM2AQ8IVF1 878 aaPredicted RBP19.63■□□□□ 0.73
TRAF4-215ENST00000584944 DDX17Q92841 729 aaKnown RBP19.63■□□□□ 0.73
TRAF4-215ENST00000584944 ROBO2Q9HCK4 1378 aa19.62■□□□□ 0.73
TRAF4-215ENST00000584944 SAFB2Q14151 953 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRAF4-215ENST00000584944 PRAM1Q96QH2 718 aa19.62■□□□□ 0.73
TRAF4-215ENST00000584944 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
TRAF4-215ENST00000584944 C1orf167Q5SNV9 1468 aa19.6■□□□□ 0.73
TRAF4-215ENST00000584944 TECPR2O15040 1411 aa19.59■□□□□ 0.73
TRAF4-215ENST00000584944 ADGRB1O14514 1584 aa19.59■□□□□ 0.73
TRAF4-215ENST00000584944 WAPLQ7Z5K2 1190 aa19.59■□□□□ 0.73
TRAF4-215ENST00000584944 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.73
TRAF4-215ENST00000584944 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
TRAF4-215ENST00000584944 RXRBP28702 533 aa19.58■□□□□ 0.72
TRAF4-215ENST00000584944 SIRT1Q96EB6 747 aa19.58■□□□□ 0.72
TRAF4-215ENST00000584944 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.72
TRAF4-215ENST00000584944 AFF2P51816 1311 aa19.57■□□□□ 0.72
TRAF4-215ENST00000584944 KNDC1Q76NI1 1749 aa19.55■□□□□ 0.72
TRAF4-215ENST00000584944 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
TRAF4-215ENST00000584944 DLC1Q96QB1 1528 aa19.55■□□□□ 0.72
TRAF4-215ENST00000584944 SOS2Q07890 1332 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-215ENST00000584944 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRAF4-215ENST00000584944 CDK12Q9NYV4 1490 aaPredicted RBP19.54■□□□□ 0.72
TRAF4-215ENST00000584944 CENPJQ9HC77 1338 aaPredicted RBP19.53■□□□□ 0.72
TRAF4-215ENST00000584944 MINK1Q8N4C8 1332 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-215ENST00000584944 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
TRAF4-215ENST00000584944 PLEKHH1Q9ULM0 1364 aa19.52■□□□□ 0.72
TRAF4-215ENST00000584944 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-215ENST00000584944 GPRASP1Q5JY77 1395 aa19.51■□□□□ 0.71
TRAF4-215ENST00000584944 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
TRAF4-215ENST00000584944 QTRT2Q9H974 415 aaKnown RBP19.5■□□□□ 0.71
TRAF4-215ENST00000584944 ADAMTS2O95450 1211 aa19.47■□□□□ 0.71
TRAF4-215ENST00000584944 RBM6P78332 1123 aaKnown RBP19.47■□□□□ 0.71
TRAF4-215ENST00000584944 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
TRAF4-215ENST00000584944 ARHGEF28Q8N1W1 1705 aaKnown RBP19.46■□□□□ 0.71
TRAF4-215ENST00000584944 CDC42BPGQ6DT37 1551 aa19.46■□□□□ 0.71
TRAF4-215ENST00000584944 NUTM2FA1L443 756 aa19.46■□□□□ 0.71
TRAF4-215ENST00000584944 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
TRAF4-215ENST00000584944 USP47Q96K76 1375 aa19.45■□□□□ 0.7
TRAF4-215ENST00000584944 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
TRAF4-215ENST00000584944 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
TRAF4-215ENST00000584944 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
TRAF4-215ENST00000584944 NPHP3Q7Z494 1330 aa19.44■□□□□ 0.7
TRAF4-215ENST00000584944 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
TRAF4-215ENST00000584944 RGS12O14924 1447 aa19.43■□□□□ 0.7
TRAF4-215ENST00000584944 WASLO00401 505 aaPredicted RBP19.42■□□□□ 0.7
TRAF4-215ENST00000584944 COL22A1Q8NFW1 1626 aaPredicted RBP19.42■□□□□ 0.7
TRAF4-215ENST00000584944 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
TRAF4-215ENST00000584944 FOXO3O43524 673 aa19.41■□□□□ 0.7
TRAF4-215ENST00000584944 FNBP4Q8N3X1 1017 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-215ENST00000584944 PXDNQ92626 1479 aa19.41■□□□□ 0.7
TRAF4-215ENST00000584944 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
TRAF4-215ENST00000584944 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
TRAF4-215ENST00000584944 USP21Q9UK80 565 aa19.4■□□□□ 0.7
TRAF4-215ENST00000584944 TRPC5Q9UL62 973 aaPredicted RBP19.38■□□□□ 0.69
TRAF4-215ENST00000584944 ADGRB2O60241 1585 aa19.37■□□□□ 0.69
TRAF4-215ENST00000584944 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-215ENST00000584944 TMF1P82094 1093 aa19.36■□□□□ 0.69
TRAF4-215ENST00000584944 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
TRAF4-215ENST00000584944 ATRNO75882 1429 aa19.35■□□□□ 0.69
TRAF4-215ENST00000584944 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
TRAF4-215ENST00000584944 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
TRAF4-215ENST00000584944 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
TRAF4-215ENST00000584944 SBNO2Q9Y2G9 1366 aa19.34■□□□□ 0.69
TRAF4-215ENST00000584944 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
TRAF4-215ENST00000584944 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.68
TRAF4-215ENST00000584944 TULP4Q9NRJ4 1543 aa19.33■□□□□ 0.68
TRAF4-215ENST00000584944 MARF1Q9Y4F3 1742 aaKnown RBP19.32■□□□□ 0.68
TRAF4-215ENST00000584944 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
TRAF4-215ENST00000584944 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
TRAF4-215ENST00000584944 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
TRAF4-215ENST00000584944 BCL9LQ86UU0 1499 aa19.32■□□□□ 0.68
TRAF4-215ENST00000584944 SPATA31A3Q5VYP0 1347 aa19.31■□□□□ 0.68
TRAF4-215ENST00000584944 POLR3GLQ9BT43 218 aa19.31■□□□□ 0.68
TRAF4-215ENST00000584944 PSME1Q06323 249 aa19.3■□□□□ 0.68
TRAF4-215ENST00000584944 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
TRAF4-215ENST00000584944 TMC1Q8TDI8 760 aa19.3■□□□□ 0.68
TRAF4-215ENST00000584944 ATAD2Q6PL18 1390 aa19.3■□□□□ 0.68
TRAF4-215ENST00000584944 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
TRAF4-215ENST00000584944 KRT28Q7Z3Y7 464 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms