RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	SNIP1	Q8TAD8	396 aa	Known RBP	11.7	□□□□□ -0.54
RHOT1-216	ENST00000584692	FAM181B	A6NEQ2	426 aa		11.69	□□□□□ -0.54
RHOT1-216	ENST00000584692	HIC1	Q14526	733 aa		11.69	□□□□□ -0.54
RHOT1-216	ENST00000584692		J3QL48	77 aa		11.68	□□□□□ -0.54
RHOT1-216	ENST00000584692	WNT7A	O00755	349 aa		11.68	□□□□□ -0.54
RHOT1-216	ENST00000584692	LOR	P23490	312 aa	Predicted RBP	11.68	□□□□□ -0.54
RHOT1-216	ENST00000584692	MORN1	Q5T089	497 aa		11.68	□□□□□ -0.54
RHOT1-216	ENST00000584692	ZC3H15	Q8WU90	426 aa	Known RBP	11.68	□□□□□ -0.54
RHOT1-216	ENST00000584692	GNPAT	O15228	680 aa		11.66	□□□□□ -0.54
RHOT1-216	ENST00000584692	PXYLP1	Q8TE99	480 aa		11.66	□□□□□ -0.54
RHOT1-216	ENST00000584692	ZBTB24	O43167	697 aa	Predicted RBP	11.65	□□□□□ -0.54
RHOT1-216	ENST00000584692	RSPH4A	Q5TD94	716 aa		11.65	□□□□□ -0.54
RHOT1-216	ENST00000584692	ZMYND10	O75800	440 aa		11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	FMNL1	O95466	1100 aa	Predicted RBP	11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	GMPR	P36959	345 aa		11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	HPS1	Q92902	700 aa		11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	KIFC2	Q96AC6	838 aa		11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	MRGPRX2	Q96LB1	330 aa		11.64	□□□□□ -0.55
RHOT1-216	ENST00000584692	FUT2	Q10981	343 aa		11.63	□□□□□ -0.55
RHOT1-216	ENST00000584692	ZSCAN1	Q8NBB4	408 aa		11.63	□□□□□ -0.55
RHOT1-216	ENST00000584692	SLC27A5	Q9Y2P5	690 aa		11.63	□□□□□ -0.55
RHOT1-216	ENST00000584692	SLC16A10	Q8TF71	515 aa		11.62	□□□□□ -0.55
RHOT1-216	ENST00000584692	FECH	P22830	423 aa		11.6	□□□□□ -0.55
RHOT1-216	ENST00000584692	TRIM32	Q13049	653 aa		11.6	□□□□□ -0.55
RHOT1-216	ENST00000584692	BARGIN	Q6ZT62	677 aa		11.6	□□□□□ -0.55
RHOT1-216	ENST00000584692	OAT	P04181	439 aa		11.59	□□□□□ -0.55
RHOT1-216	ENST00000584692	NXF1	Q9UBU9	619 aa	Known RBP	11.59	□□□□□ -0.55
RHOT1-216	ENST00000584692	ATP6V1A	P38606	617 aa		11.58	□□□□□ -0.56
RHOT1-216	ENST00000584692	BRICD5	Q6PL45	260 aa		11.58	□□□□□ -0.56
RHOT1-216	ENST00000584692	RDH13	Q8NBN7	331 aa		11.58	□□□□□ -0.56
RHOT1-216	ENST00000584692	SUZ12	Q15022	739 aa	Known RBP	11.57	□□□□□ -0.56
RHOT1-216	ENST00000584692	METTL3	Q86U44	580 aa	Known RBP	11.57	□□□□□ -0.56
RHOT1-216	ENST00000584692	MAP2K5	Q13163	448 aa		11.56	□□□□□ -0.56
RHOT1-216	ENST00000584692	MSS51	Q4VC12	460 aa		11.56	□□□□□ -0.56
RHOT1-216	ENST00000584692	SALL2	Q9Y467	1007 aa	Predicted RBP	11.56	□□□□□ -0.56
RHOT1-216	ENST00000584692	RNF19B	Q6ZMZ0	732 aa		11.55	□□□□□ -0.56
RHOT1-216	ENST00000584692	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.55	□□□□□ -0.56
RHOT1-216	ENST00000584692	VEGFB	P49765	207 aa		11.54	□□□□□ -0.56
RHOT1-216	ENST00000584692	IRF6	O14896	467 aa		11.53	□□□□□ -0.56
RHOT1-216	ENST00000584692	TPRN	Q4KMQ1	711 aa		11.53	□□□□□ -0.56
RHOT1-216	ENST00000584692	IRF7	Q92985	503 aa		11.53	□□□□□ -0.56
RHOT1-216	ENST00000584692	DDX11L8	A8MPP1	907 aa		11.51	□□□□□ -0.57
RHOT1-216	ENST00000584692	REPIN1	Q9BWE0	567 aa	Known RBP	11.5	□□□□□ -0.57
RHOT1-216	ENST00000584692	DAXX	Q9UER7	740 aa	Predicted RBP	11.5	□□□□□ -0.57
RHOT1-216	ENST00000584692	ERBB4	Q15303	1308 aa		11.5	□□□□□ -0.57
RHOT1-216	ENST00000584692	GCGR	P47871	477 aa		11.49	□□□□□ -0.57
RHOT1-216	ENST00000584692	NPAS3	Q8IXF0	933 aa		11.49	□□□□□ -0.57
RHOT1-216	ENST00000584692	KRI1	Q8N9T8	703 aa	Known RBP	11.49	□□□□□ -0.57
RHOT1-216	ENST00000584692		H3BM21	787 aa		11.48	□□□□□ -0.57
RHOT1-216	ENST00000584692	BMP1	P13497	986 aa		11.48	□□□□□ -0.57
RHOT1-216	ENST00000584692	NLRP7	Q8WX94	980 aa		11.48	□□□□□ -0.57
RHOT1-216	ENST00000584692	CCDC102A	Q96A19	550 aa		11.48	□□□□□ -0.57
RHOT1-216	ENST00000584692	MMP16	P51512	607 aa		11.47	□□□□□ -0.57
RHOT1-216	ENST00000584692	RC3H1	Q5TC82	1133 aa	Known RBP	11.47	□□□□□ -0.57
RHOT1-216	ENST00000584692	SKOR1	P84550	965 aa		11.46	□□□□□ -0.57
RHOT1-216	ENST00000584692	TRIM46	Q7Z4K8	759 aa		11.46	□□□□□ -0.57
RHOT1-216	ENST00000584692	SLC24A3	Q9HC58	644 aa		11.45	□□□□□ -0.58
RHOT1-216	ENST00000584692	ALDH1A1	P00352	501 aa		11.44	□□□□□ -0.58
RHOT1-216	ENST00000584692	AK7	Q96M32	723 aa		11.44	□□□□□ -0.58
RHOT1-216	ENST00000584692	PRKCSH	P14314	528 aa	Predicted RBP	11.43	□□□□□ -0.58
RHOT1-216	ENST00000584692	PHOX2B	Q99453	314 aa		11.43	□□□□□ -0.58
RHOT1-216	ENST00000584692	DXO	O77932	396 aa	Known RBP	11.4	□□□□□ -0.58
RHOT1-216	ENST00000584692	TRIM66	O15016	1216 aa		11.39	□□□□□ -0.59
RHOT1-216	ENST00000584692	WNT7B	P56706	349 aa		11.39	□□□□□ -0.59
RHOT1-216	ENST00000584692	CCDC24	Q8N4L8	307 aa		11.39	□□□□□ -0.59
RHOT1-216	ENST00000584692	CAPN5	O15484	640 aa	Predicted RBP	11.38	□□□□□ -0.59
RHOT1-216	ENST00000584692	AMHR2	Q16671	573 aa		11.38	□□□□□ -0.59
RHOT1-216	ENST00000584692		Q3C1V9	767 aa		11.38	□□□□□ -0.59
RHOT1-216	ENST00000584692	SULF1	Q8IWU6	871 aa		11.38	□□□□□ -0.59
RHOT1-216	ENST00000584692	KCTD17	Q8N5Z5	321 aa		11.37	□□□□□ -0.59
RHOT1-216	ENST00000584692	GRIPAP1	Q4V328	841 aa		11.36	□□□□□ -0.59
RHOT1-216	ENST00000584692	USB1	Q9BQ65	265 aa	Known RBP	11.35	□□□□□ -0.59
RHOT1-216	ENST00000584692	GSK3A	P49840	483 aa		11.34	□□□□□ -0.59
RHOT1-216	ENST00000584692	SIAH2	O43255	324 aa		11.33	□□□□□ -0.6
RHOT1-216	ENST00000584692	ZFP42	Q96MM3	310 aa		11.33	□□□□□ -0.6
RHOT1-216	ENST00000584692	KCNMA1	Q12791	1236 aa		11.32	□□□□□ -0.6
RHOT1-216	ENST00000584692	CLCN1	P35523	988 aa		11.31	□□□□□ -0.6
RHOT1-216	ENST00000584692	MDM2	Q00987	491 aa	Predicted RBP	11.31	□□□□□ -0.6
RHOT1-216	ENST00000584692	PDE4D	Q08499	809 aa		11.31	□□□□□ -0.6
RHOT1-216	ENST00000584692	GPCPD1	Q9NPB8	672 aa		11.3	□□□□□ -0.6
RHOT1-216	ENST00000584692	WASF2	Q9Y6W5	498 aa		11.3	□□□□□ -0.6
RHOT1-216	ENST00000584692	PARP9	Q8IXQ6	854 aa		11.28	□□□□□ -0.6
RHOT1-216	ENST00000584692	EHBP1	Q8NDI1	1231 aa		11.28	□□□□□ -0.6
RHOT1-216	ENST00000584692	VSIG8	P0DPA2	414 aa		11.27	□□□□□ -0.61
RHOT1-216	ENST00000584692	TTLL12	Q14166	644 aa	Predicted RBP	11.27	□□□□□ -0.61
RHOT1-216	ENST00000584692	HLA-C	Q95604	372 aa		11.26	□□□□□ -0.61
RHOT1-216	ENST00000584692	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.25	□□□□□ -0.61
RHOT1-216	ENST00000584692	SOBP	A7XYQ1	873 aa		11.24	□□□□□ -0.61
RHOT1-216	ENST00000584692	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.24	□□□□□ -0.61
RHOT1-216	ENST00000584692	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.23	□□□□□ -0.61
RHOT1-216	ENST00000584692	KDM4A	O75164	1064 aa		11.21	□□□□□ -0.61
RHOT1-216	ENST00000584692	CD46	P15529	392 aa		11.21	□□□□□ -0.61
RHOT1-216	ENST00000584692	TMEM151A	Q8N4L1	468 aa		11.21	□□□□□ -0.61
RHOT1-216	ENST00000584692	JUND	P17535	347 aa		11.2	□□□□□ -0.62
RHOT1-216	ENST00000584692	SSTR3	P32745	418 aa	Predicted RBP	11.2	□□□□□ -0.62
RHOT1-216	ENST00000584692	BRPF1	P55201	1214 aa	Predicted RBP	11.19	□□□□□ -0.62
RHOT1-216	ENST00000584692	MRPL14	Q6P1L8	145 aa	Known RBP	11.19	□□□□□ -0.62
RHOT1-216	ENST00000584692	PURB	Q96QR8	312 aa	Known RBP	11.19	□□□□□ -0.62
RHOT1-216	ENST00000584692	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.19	□□□□□ -0.62
RHOT1-216	ENST00000584692	GDF11	O95390	407 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms