RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 ZNF772Q68DY9 489 aaPredicted RBP30.28■■■□□ 2.44
TOP3A-218ENST00000584669 TMEM132EQ6IEE7 984 aa30.27■■■□□ 2.44
TOP3A-218ENST00000584669 ORAI2Q96SN7 254 aa30.27■■■□□ 2.44
TOP3A-218ENST00000584669 DCAF11Q8TEB1 546 aa30.26■■■□□ 2.43
TOP3A-218ENST00000584669 KDM2AQ9Y2K7 1162 aa30.26■■■□□ 2.43
TOP3A-218ENST00000584669 DHX57Q6P158 1386 aaKnown RBP30.26■■■□□ 2.43
TOP3A-218ENST00000584669 CFAP70Q5T0N1 1121 aa30.24■■■□□ 2.43
TOP3A-218ENST00000584669 C14orf93Q9H972 538 aaKnown RBP30.24■■■□□ 2.43
TOP3A-218ENST00000584669 PNPLA6Q8IY17 1366 aa30.24■■■□□ 2.43
TOP3A-218ENST00000584669 LRPPRCP42704 1394 aaKnown RBP30.23■■■□□ 2.43
TOP3A-218ENST00000584669 TECPR2O15040 1411 aa30.21■■■□□ 2.43
TOP3A-218ENST00000584669 YTHDC2Q9H6S0 1430 aaKnown RBP30.21■■■□□ 2.43
TOP3A-218ENST00000584669 WAPLQ7Z5K2 1190 aa30.2■■■□□ 2.43
TOP3A-218ENST00000584669 CDC42BPGQ6DT37 1551 aa30.19■■■□□ 2.42
TOP3A-218ENST00000584669 AFF2P51816 1311 aa30.19■■■□□ 2.42
TOP3A-218ENST00000584669 C8orf37Q96NL8 207 aa30.18■■■□□ 2.42
TOP3A-218ENST00000584669 ABCC11Q96J66 1382 aa30.17■■■□□ 2.42
TOP3A-218ENST00000584669 ESCO1Q5FWF5 840 aa30.17■■■□□ 2.42
TOP3A-218ENST00000584669 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
TOP3A-218ENST00000584669 SOS2Q07890 1332 aaPredicted RBP30.15■■■□□ 2.42
TOP3A-218ENST00000584669 ADGRB1O14514 1584 aa30.15■■■□□ 2.42
TOP3A-218ENST00000584669 PLEKHH1Q9ULM0 1364 aa30.15■■■□□ 2.42
TOP3A-218ENST00000584669 ADAMTS2O95450 1211 aa30.14■■■□□ 2.42
TOP3A-218ENST00000584669 RXRBP28702 533 aa30.13■■■□□ 2.41
TOP3A-218ENST00000584669 STAC3Q96MF2 364 aa30.13■■■□□ 2.41
TOP3A-218ENST00000584669 SIN3AQ96ST3 1273 aa30.13■■■□□ 2.41
TOP3A-218ENST00000584669 NPHP3Q7Z494 1330 aa30.1■■■□□ 2.41
TOP3A-218ENST00000584669 XPCQ01831 940 aaPredicted RBP30.09■■■□□ 2.41
TOP3A-218ENST00000584669 KIAA1210Q9ULL0 1709 aa30.08■■■□□ 2.41
TOP3A-218ENST00000584669 NGLY1Q96IV0 654 aa30.07■■■□□ 2.4
TOP3A-218ENST00000584669 FOXO3O43524 673 aa30.06■■■□□ 2.4
TOP3A-218ENST00000584669 DLC1Q96QB1 1528 aa30.06■■■□□ 2.4
TOP3A-218ENST00000584669 NEUROD1Q13562 356 aa30.05■■■□□ 2.4
TOP3A-218ENST00000584669 FMN2Q9NZ56 1722 aa30.04■■■□□ 2.4
TOP3A-218ENST00000584669 SAFB2Q14151 953 aaKnown RBP eCLIP30.03■■■□□ 2.4
TOP3A-218ENST00000584669 SIRT1Q96EB6 747 aa30.03■■■□□ 2.4
TOP3A-218ENST00000584669 RGPD8O14715 1765 aaPredicted RBP30.03■■■□□ 2.4
TOP3A-218ENST00000584669 ARHGEF28Q8N1W1 1705 aaKnown RBP30.02■■■□□ 2.4
TOP3A-218ENST00000584669 PXDNQ92626 1479 aa30.02■■■□□ 2.4
TOP3A-218ENST00000584669 QTRT2Q9H974 415 aaKnown RBP30.02■■■□□ 2.4
TOP3A-218ENST00000584669 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
TOP3A-218ENST00000584669 TRAK1Q9UPV9 953 aa30■■■□□ 2.39
TOP3A-218ENST00000584669 PRAM1Q96QH2 718 aa29.99■■■□□ 2.39
TOP3A-218ENST00000584669 CDK12Q9NYV4 1490 aaPredicted RBP29.98■■■□□ 2.39
TOP3A-218ENST00000584669 POGKQ9P215 609 aa29.97■■■□□ 2.39
TOP3A-218ENST00000584669 COL22A1Q8NFW1 1626 aaPredicted RBP29.96■■■□□ 2.39
TOP3A-218ENST00000584669 RBM6P78332 1123 aaKnown RBP29.96■■■□□ 2.39
TOP3A-218ENST00000584669 USP21Q9UK80 565 aa29.95■■■□□ 2.39
TOP3A-218ENST00000584669 KIF1AQ12756 1690 aa29.93■■■□□ 2.38
TOP3A-218ENST00000584669 UPF1Q92900 1129 aaKnown RBP eCLIP29.93■■■□□ 2.38
TOP3A-218ENST00000584669 RGS12O14924 1447 aa29.92■■■□□ 2.38
TOP3A-218ENST00000584669 ADGRB2O60241 1585 aa29.92■■■□□ 2.38
TOP3A-218ENST00000584669 TRPM1Q7Z4N2 1603 aa29.92■■■□□ 2.38
TOP3A-218ENST00000584669 NBPF1Q3BBV0 1214 aa29.91■■■□□ 2.38
TOP3A-218ENST00000584669 PHF8Q9UPP1 1060 aa29.9■■■□□ 2.38
TOP3A-218ENST00000584669 KRT28Q7Z3Y7 464 aa29.89■■■□□ 2.38
TOP3A-218ENST00000584669 PCGF6Q9BYE7 350 aa29.88■■■□□ 2.37
TOP3A-218ENST00000584669 TRPC5Q9UL62 973 aaPredicted RBP29.88■■■□□ 2.37
TOP3A-218ENST00000584669 USP32Q8NFA0 1604 aa29.87■■■□□ 2.37
TOP3A-218ENST00000584669 FNBP4Q8N3X1 1017 aaPredicted RBP29.86■■■□□ 2.37
TOP3A-218ENST00000584669 SPATA31A3Q5VYP0 1347 aa29.86■■■□□ 2.37
TOP3A-218ENST00000584669 PLEKHG5O94827 1062 aa29.85■■■□□ 2.37
TOP3A-218ENST00000584669 HIRIP3Q9BW71 556 aaPredicted RBP29.85■■■□□ 2.37
TOP3A-218ENST00000584669 MINK1Q8N4C8 1332 aaPredicted RBP29.85■■■□□ 2.37
TOP3A-218ENST00000584669 PSME1Q06323 249 aa29.82■■■□□ 2.36
TOP3A-218ENST00000584669 ATRNO75882 1429 aa29.81■■■□□ 2.36
TOP3A-218ENST00000584669 HAP1P54257 671 aaPredicted RBP29.81■■■□□ 2.36
TOP3A-218ENST00000584669 LMOD2Q6P5Q4 547 aa29.81■■■□□ 2.36
TOP3A-218ENST00000584669 MARF1Q9Y4F3 1742 aaKnown RBP29.81■■■□□ 2.36
TOP3A-218ENST00000584669 PMFBP1Q8TBY8 1022 aa29.8■■■□□ 2.36
TOP3A-218ENST00000584669 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
TOP3A-218ENST00000584669 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
TOP3A-218ENST00000584669 TONSLQ96HA7 1378 aa29.78■■■□□ 2.36
TOP3A-218ENST00000584669 QRICH2Q9H0J4 1663 aa29.78■■■□□ 2.36
TOP3A-218ENST00000584669 BCL9LQ86UU0 1499 aa29.77■■■□□ 2.36
TOP3A-218ENST00000584669 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
TOP3A-218ENST00000584669 CABLES1Q8TDN4 633 aa29.75■■■□□ 2.35
TOP3A-218ENST00000584669 TULP4Q9NRJ4 1543 aa29.75■■■□□ 2.35
TOP3A-218ENST00000584669 SBNO1A3KN83 1393 aa29.74■■■□□ 2.35
TOP3A-218ENST00000584669 EIF3AQ14152 1382 aaKnown RBP29.74■■■□□ 2.35
TOP3A-218ENST00000584669 WASLO00401 505 aaPredicted RBP29.73■■■□□ 2.35
TOP3A-218ENST00000584669 ITSN1Q15811 1721 aa29.72■■■□□ 2.35
TOP3A-218ENST00000584669 PRR36Q9H6K5 1346 aa29.71■■■□□ 2.35
TOP3A-218ENST00000584669 ARHGEF10O15013 1369 aa29.71■■■□□ 2.35
TOP3A-218ENST00000584669 ROCK2O75116 1388 aaKnown RBP29.71■■■□□ 2.35
TOP3A-218ENST00000584669 ATAD2Q6PL18 1390 aa29.71■■■□□ 2.35
TOP3A-218ENST00000584669 UNC5CLQ8IV45 518 aa29.69■■■□□ 2.34
TOP3A-218ENST00000584669 GJD4Q96KN9 370 aaPredicted RBP29.69■■■□□ 2.34
TOP3A-218ENST00000584669 GPRASP1Q5JY77 1395 aa29.68■■■□□ 2.34
TOP3A-218ENST00000584669 SLIT2O94813 1529 aa29.67■■■□□ 2.34
TOP3A-218ENST00000584669 CENPJQ9HC77 1338 aaPredicted RBP29.67■■■□□ 2.34
TOP3A-218ENST00000584669 TOPAZ1Q8N9V7 1692 aa29.66■■■□□ 2.34
TOP3A-218ENST00000584669 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.65■■■□□ 2.34
TOP3A-218ENST00000584669 NGDNQ8NEJ9 315 aaKnown RBP29.65■■■□□ 2.34
TOP3A-218ENST00000584669 ATP7BP35670 1465 aa29.65■■■□□ 2.34
TOP3A-218ENST00000584669 CDK19Q9BWU1 502 aa29.64■■■□□ 2.34
TOP3A-218ENST00000584669 ABCA3Q99758 1704 aa29.62■■■□□ 2.33
TOP3A-218ENST00000584669 TRPM3Q9HCF6 1732 aaPredicted RBP29.62■■■□□ 2.33
TOP3A-218ENST00000584669 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
TOP3A-218ENST00000584669 CCDC9Q9Y3X0 531 aaKnown RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms