RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KDM5DQ9BY66 1539 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 USHBP1Q8N6Y0 703 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
RFFL-212ENST00000584655 FYB1O15117 783 aa13.4□□□□□ -0.26
RFFL-212ENST00000584655 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
RFFL-212ENST00000584655 RIPK4P57078 832 aa13.39□□□□□ -0.27
RFFL-212ENST00000584655 PRKAR2BP31323 418 aa13.39□□□□□ -0.27
RFFL-212ENST00000584655 KDM5CP41229 1560 aa13.39□□□□□ -0.27
RFFL-212ENST00000584655 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
RFFL-212ENST00000584655 CLTCL1P53675 1640 aa13.38□□□□□ -0.27
RFFL-212ENST00000584655 METP08581 1390 aa13.37□□□□□ -0.27
RFFL-212ENST00000584655 FOXO3O43524 673 aa13.37□□□□□ -0.27
RFFL-212ENST00000584655 NLRP6P59044 892 aa13.37□□□□□ -0.27
RFFL-212ENST00000584655 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
RFFL-212ENST00000584655 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
RFFL-212ENST00000584655 E9PCH4 1651 aa13.36□□□□□ -0.27
RFFL-212ENST00000584655 KCNA6P17658 529 aa13.36□□□□□ -0.27
RFFL-212ENST00000584655 COG3Q96JB2 828 aa13.36□□□□□ -0.27
RFFL-212ENST00000584655 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
RFFL-212ENST00000584655 AMPHP49418 695 aa13.35□□□□□ -0.27
RFFL-212ENST00000584655 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
RFFL-212ENST00000584655 PARD3Q8TEW0 1356 aa13.34□□□□□ -0.27
RFFL-212ENST00000584655 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
RFFL-212ENST00000584655 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
RFFL-212ENST00000584655 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
RFFL-212ENST00000584655 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
RFFL-212ENST00000584655 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
RFFL-212ENST00000584655 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
RFFL-212ENST00000584655 A0A1W2PP64 1363 aa13.33□□□□□ -0.28
RFFL-212ENST00000584655 EXOSC9Q06265 439 aaKnown RBP13.33□□□□□ -0.28
RFFL-212ENST00000584655 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
RFFL-212ENST00000584655 HDGFP51858 240 aaKnown RBP13.32□□□□□ -0.28
RFFL-212ENST00000584655 CEP152O94986 1710 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 WASLO00401 505 aaPredicted RBP13.32□□□□□ -0.28
RFFL-212ENST00000584655 MCM10Q7L590 875 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 ABTB2Q8N961 1025 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 KIDINS220Q9ULH0 1771 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 ITPRIPQ8IWB1 547 aa13.32□□□□□ -0.28
RFFL-212ENST00000584655 RIMS2Q9UQ26 1411 aa13.31□□□□□ -0.28
RFFL-212ENST00000584655 ZC3H6P61129 1189 aaKnown RBP13.31□□□□□ -0.28
RFFL-212ENST00000584655 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
RFFL-212ENST00000584655 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 CCDC61Q9Y6R9 512 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 TNRQ92752 1358 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 PTPRTO14522 1441 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
RFFL-212ENST00000584655 ARXQ96QS3 562 aa13.29□□□□□ -0.28
RFFL-212ENST00000584655 ACEP12821 1306 aa13.29□□□□□ -0.28
RFFL-212ENST00000584655 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
RFFL-212ENST00000584655 PSME1Q06323 249 aa13.29□□□□□ -0.28
RFFL-212ENST00000584655 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
RFFL-212ENST00000584655 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
RFFL-212ENST00000584655 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
RFFL-212ENST00000584655 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
RFFL-212ENST00000584655 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.28
RFFL-212ENST00000584655 ABCC3O15438 1527 aa13.27□□□□□ -0.28
RFFL-212ENST00000584655 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.28
RFFL-212ENST00000584655 IQGAP3Q86VI3 1631 aa13.27□□□□□ -0.29
RFFL-212ENST00000584655 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
RFFL-212ENST00000584655 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
RFFL-212ENST00000584655 ORAI2Q96SN7 254 aa13.27□□□□□ -0.29
RFFL-212ENST00000584655 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
RFFL-212ENST00000584655 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
RFFL-212ENST00000584655 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
RFFL-212ENST00000584655 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
RFFL-212ENST00000584655 SLFN5Q08AF3 891 aa13.26□□□□□ -0.29
RFFL-212ENST00000584655 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
RFFL-212ENST00000584655 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.25□□□□□ -0.29
RFFL-212ENST00000584655 TRPM2O94759 1503 aa13.25□□□□□ -0.29
RFFL-212ENST00000584655 PLXNC1O60486 1568 aa13.25□□□□□ -0.29
RFFL-212ENST00000584655 RLBP1P12271 317 aa13.25□□□□□ -0.29
RFFL-212ENST00000584655 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
RFFL-212ENST00000584655 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
RFFL-212ENST00000584655 PRR36Q9H6K5 1346 aa13.25□□□□□ -0.29
RFFL-212ENST00000584655 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
RFFL-212ENST00000584655 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
RFFL-212ENST00000584655 UNC13BO14795 1591 aa13.24□□□□□ -0.29
RFFL-212ENST00000584655 NEO1Q92859 1461 aa13.24□□□□□ -0.29
RFFL-212ENST00000584655 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
RFFL-212ENST00000584655 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
RFFL-212ENST00000584655 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
RFFL-212ENST00000584655 ZNF330Q9Y3S2 320 aaPredicted RBP13.23□□□□□ -0.29
RFFL-212ENST00000584655 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
RFFL-212ENST00000584655 TRPM1Q7Z4N2 1603 aa13.23□□□□□ -0.29
RFFL-212ENST00000584655 E9PSI1 815 aa13.23□□□□□ -0.29
RFFL-212ENST00000584655 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
RFFL-212ENST00000584655 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
RFFL-212ENST00000584655 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
RFFL-212ENST00000584655 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
RFFL-212ENST00000584655 ROBO2Q9HCK4 1378 aa13.22□□□□□ -0.29
RFFL-212ENST00000584655 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
RFFL-212ENST00000584655 LRRC59Q96AG4 307 aaKnown RBP13.22□□□□□ -0.29
RFFL-212ENST00000584655 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
RFFL-212ENST00000584655 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
RFFL-212ENST00000584655 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
RFFL-212ENST00000584655 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms