RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 DLC1Q96QB1 1528 aa39.21■■■■□ 3.87
SMARCD2-210ENST00000584400 NEUROD1Q13562 356 aa39.21■■■■□ 3.87
SMARCD2-210ENST00000584400 JCADQ9P266 1359 aa39.21■■■■□ 3.87
SMARCD2-210ENST00000584400 PRAM1Q96QH2 718 aa39.2■■■■□ 3.87
SMARCD2-210ENST00000584400 MED1Q15648 1581 aaPredicted RBP39.19■■■■□ 3.86
SMARCD2-210ENST00000584400 TRAK1Q9UPV9 953 aa39.18■■■■□ 3.86
SMARCD2-210ENST00000584400 L3MBTL2Q969R5 705 aa39.16■■■■□ 3.86
SMARCD2-210ENST00000584400 COL16A1Q07092 1604 aaPredicted RBP39.14■■■■□ 3.86
SMARCD2-210ENST00000584400 PHF23Q9BUL5 403 aaPredicted RBP39.12■■■■□ 3.85
SMARCD2-210ENST00000584400 SAFB2Q14151 953 aaKnown RBP eCLIP39.11■■■■□ 3.85
SMARCD2-210ENST00000584400 ORAI2Q96SN7 254 aa39.11■■■■□ 3.85
SMARCD2-210ENST00000584400 ESCO1Q5FWF5 840 aa39.1■■■■□ 3.85
SMARCD2-210ENST00000584400 LRRC59Q96AG4 307 aaKnown RBP39.09■■■■□ 3.85
SMARCD2-210ENST00000584400 KIAA1210Q9ULL0 1709 aa39.06■■■■□ 3.84
SMARCD2-210ENST00000584400 SPATA31A6Q5VVP1 1343 aa39.06■■■■□ 3.84
SMARCD2-210ENST00000584400 NHSL1Q5SYE7 1610 aa39.06■■■■□ 3.84
SMARCD2-210ENST00000584400 NUTM2FA1L443 756 aa39.03■■■■□ 3.84
SMARCD2-210ENST00000584400 NPHP3Q7Z494 1330 aa39.01■■■■□ 3.84
SMARCD2-210ENST00000584400 DDX17Q92841 729 aaKnown RBP39■■■■□ 3.83
SMARCD2-210ENST00000584400 NBPF1Q3BBV0 1214 aa38.98■■■■□ 3.83
SMARCD2-210ENST00000584400 EIF3AQ14152 1382 aaKnown RBP38.97■■■■□ 3.83
SMARCD2-210ENST00000584400 SOS2Q07890 1332 aaPredicted RBP38.97■■■■□ 3.83
SMARCD2-210ENST00000584400 FMN2Q9NZ56 1722 aa38.97■■■■□ 3.83
SMARCD2-210ENST00000584400 TONSLQ96HA7 1378 aa38.95■■■■□ 3.83
SMARCD2-210ENST00000584400 MINK1Q8N4C8 1332 aaPredicted RBP38.95■■■■□ 3.83
SMARCD2-210ENST00000584400 ADGRB2O60241 1585 aa38.94■■■■□ 3.82
SMARCD2-210ENST00000584400 HIRIP3Q9BW71 556 aaPredicted RBP38.93■■■■□ 3.82
SMARCD2-210ENST00000584400 SHPRHQ149N8 1683 aa38.93■■■■□ 3.82
SMARCD2-210ENST00000584400 FOXO3O43524 673 aa38.92■■■■□ 3.82
SMARCD2-210ENST00000584400 PCGF6Q9BYE7 350 aa38.92■■■■□ 3.82
SMARCD2-210ENST00000584400 ANKARQ7Z5J8 1434 aa38.91■■■■□ 3.82
SMARCD2-210ENST00000584400 WASLO00401 505 aaPredicted RBP38.9■■■■□ 3.82
SMARCD2-210ENST00000584400 PHF8Q9UPP1 1060 aa38.88■■■■□ 3.81
SMARCD2-210ENST00000584400 ARHGEF28Q8N1W1 1705 aaKnown RBP38.88■■■■□ 3.81
SMARCD2-210ENST00000584400 MEX3CQ5U5Q3 659 aaKnown RBP38.87■■■■□ 3.81
SMARCD2-210ENST00000584400 ILDR2Q71H61 639 aa38.86■■■■□ 3.81
SMARCD2-210ENST00000584400 PNPLA6Q8IY17 1366 aa38.85■■■■□ 3.81
SMARCD2-210ENST00000584400 KIF1AQ12756 1690 aa38.85■■■■□ 3.81
SMARCD2-210ENST00000584400 ROCK2O75116 1388 aaKnown RBP38.84■■■■□ 3.81
SMARCD2-210ENST00000584400 NUTM2BA6NNL0 878 aaPredicted RBP38.82■■■■□ 3.8
SMARCD2-210ENST00000584400 NUTM2EB1AL46 878 aaPredicted RBP38.82■■■■□ 3.8
SMARCD2-210ENST00000584400 NUTM2AQ8IVF1 878 aaPredicted RBP38.82■■■■□ 3.8
SMARCD2-210ENST00000584400 CENPJQ9HC77 1338 aaPredicted RBP38.81■■■■□ 3.8
SMARCD2-210ENST00000584400 PXDNQ92626 1479 aa38.79■■■■□ 3.8
SMARCD2-210ENST00000584400 TULP4Q9NRJ4 1543 aa38.79■■■■□ 3.8
SMARCD2-210ENST00000584400 PSME1Q06323 249 aa38.79■■■■□ 3.8
SMARCD2-210ENST00000584400 LRP6O75581 1613 aa38.78■■■■□ 3.8
SMARCD2-210ENST00000584400 TRPM1Q7Z4N2 1603 aa38.78■■■■□ 3.8
SMARCD2-210ENST00000584400 XPCQ01831 940 aaPredicted RBP38.78■■■■□ 3.8
SMARCD2-210ENST00000584400 KRT28Q7Z3Y7 464 aa38.77■■■■□ 3.8
SMARCD2-210ENST00000584400 NBPF8Q3BBV2 869 aa38.75■■■■□ 3.79
SMARCD2-210ENST00000584400 RGS17Q9UGC6 210 aaPredicted RBP38.75■■■■□ 3.79
SMARCD2-210ENST00000584400 CLSPNQ9HAW4 1339 aa38.74■■■■□ 3.79
SMARCD2-210ENST00000584400 CDK19Q9BWU1 502 aa38.74■■■■□ 3.79
SMARCD2-210ENST00000584400 PMFBP1Q8TBY8 1022 aa38.72■■■■□ 3.79
SMARCD2-210ENST00000584400 PRR36Q9H6K5 1346 aa38.71■■■■□ 3.79
SMARCD2-210ENST00000584400 USP32Q8NFA0 1604 aa38.71■■■■□ 3.79
SMARCD2-210ENST00000584400 NUDT16Q96DE0 195 aaKnown RBP38.7■■■■□ 3.79
SMARCD2-210ENST00000584400 GPRASP1Q5JY77 1395 aa38.7■■■■□ 3.78
SMARCD2-210ENST00000584400 SPATA31A3Q5VYP0 1347 aa38.68■■■■□ 3.78
SMARCD2-210ENST00000584400 ZNF772Q68DY9 489 aaPredicted RBP38.68■■■■□ 3.78
SMARCD2-210ENST00000584400 RGPD8O14715 1765 aaPredicted RBP38.67■■■■□ 3.78
SMARCD2-210ENST00000584400 SBNO1A3KN83 1393 aa38.66■■■■□ 3.78
SMARCD2-210ENST00000584400 NGDNQ8NEJ9 315 aaKnown RBP38.65■■■■□ 3.78
SMARCD2-210ENST00000584400 CARD11Q9BXL7 1154 aa38.65■■■■□ 3.78
SMARCD2-210ENST00000584400 CCDC61Q9Y6R9 512 aa38.64■■■■□ 3.78
SMARCD2-210ENST00000584400 ATP7BP35670 1465 aa38.63■■■■□ 3.77
SMARCD2-210ENST00000584400 SRPK2P78362 688 aaKnown RBP38.63■■■■□ 3.77
SMARCD2-210ENST00000584400 TIMELESSQ9UNS1 1208 aa38.62■■■■□ 3.77
SMARCD2-210ENST00000584400 COL22A1Q8NFW1 1626 aaPredicted RBP38.62■■■■□ 3.77
SMARCD2-210ENST00000584400 RALGAPBQ86X10 1494 aa38.61■■■■□ 3.77
SMARCD2-210ENST00000584400 ADAMTS2O95450 1211 aa38.61■■■■□ 3.77
SMARCD2-210ENST00000584400 TNS3Q68CZ2 1445 aa38.61■■■■□ 3.77
SMARCD2-210ENST00000584400 C8orf37Q96NL8 207 aa38.6■■■■□ 3.77
SMARCD2-210ENST00000584400 POTEAQ6S8J7 498 aa38.59■■■■□ 3.77
SMARCD2-210ENST00000584400 ARHGEF10O15013 1369 aa38.58■■■■□ 3.77
SMARCD2-210ENST00000584400 SOCS7O14512 581 aa38.58■■■■□ 3.77
SMARCD2-210ENST00000584400 EVC2Q86UK5 1308 aa38.58■■■■□ 3.77
SMARCD2-210ENST00000584400 QRICH2Q9H0J4 1663 aa38.56■■■■□ 3.76
SMARCD2-210ENST00000584400 ITSN1Q15811 1721 aa38.56■■■■□ 3.76
SMARCD2-210ENST00000584400 LMOD2Q6P5Q4 547 aa38.56■■■■□ 3.76
SMARCD2-210ENST00000584400 NGLY1Q96IV0 654 aa38.55■■■■□ 3.76
SMARCD2-210ENST00000584400 AFF2P51816 1311 aa38.55■■■■□ 3.76
SMARCD2-210ENST00000584400 PLEKHG3A1L390 1219 aa38.52■■■■□ 3.76
SMARCD2-210ENST00000584400 CABP2Q9NPB3 220 aa38.52■■■■□ 3.76
SMARCD2-210ENST00000584400 HAP1P54257 671 aaPredicted RBP38.51■■■■□ 3.76
SMARCD2-210ENST00000584400 CCER1Q8TC90 406 aaPredicted RBP38.51■■■■□ 3.76
SMARCD2-210ENST00000584400 POLR3AO14802 1390 aaPredicted RBP38.48■■■■□ 3.75
SMARCD2-210ENST00000584400 ACEP12821 1306 aa38.47■■■■□ 3.75
SMARCD2-210ENST00000584400 SBNO2Q9Y2G9 1366 aa38.46■■■■□ 3.75
SMARCD2-210ENST00000584400 PAK3O75914 559 aaPredicted RBP38.46■■■■□ 3.75
SMARCD2-210ENST00000584400 PPIP5K1Q6PFW1 1433 aa38.46■■■■□ 3.75
SMARCD2-210ENST00000584400 FNBP4Q8N3X1 1017 aaPredicted RBP38.43■■■■□ 3.74
SMARCD2-210ENST00000584400 TOPAZ1Q8N9V7 1692 aa38.43■■■■□ 3.74
SMARCD2-210ENST00000584400 USP21Q9UK80 565 aa38.41■■■■□ 3.74
SMARCD2-210ENST00000584400 RXRBP28702 533 aa38.4■■■■□ 3.74
SMARCD2-210ENST00000584400 TRPM3Q9HCF6 1732 aaPredicted RBP38.39■■■■□ 3.74
SMARCD2-210ENST00000584400 SLC24A1O60721 1099 aa38.39■■■■□ 3.74
SMARCD2-210ENST00000584400 CABLES1Q8TDN4 633 aa38.38■■■■□ 3.73
SMARCD2-210ENST00000584400 QTRT2Q9H974 415 aaKnown RBP38.38■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms