RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 ESCO1Q5FWF5 840 aa21.45■■□□□ 1.02
SCN4A-203ENST00000584310 NALCNQ8IZF0 1738 aa21.45■■□□□ 1.02
SCN4A-203ENST00000584310 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
SCN4A-203ENST00000584310 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
SCN4A-203ENST00000584310 KNDC1Q76NI1 1749 aa21.41■■□□□ 1.02
SCN4A-203ENST00000584310 CDC42BPGQ6DT37 1551 aa21.41■■□□□ 1.02
SCN4A-203ENST00000584310 TRAK1Q9UPV9 953 aa21.41■■□□□ 1.02
SCN4A-203ENST00000584310 SAFB2Q14151 953 aaKnown RBP eCLIP21.4■■□□□ 1.02
SCN4A-203ENST00000584310 ORAI2Q96SN7 254 aa21.39■■□□□ 1.01
SCN4A-203ENST00000584310 COL16A1Q07092 1604 aaPredicted RBP21.39■■□□□ 1.01
SCN4A-203ENST00000584310 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
SCN4A-203ENST00000584310 NUTM2FA1L443 756 aa21.38■■□□□ 1.01
SCN4A-203ENST00000584310 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
SCN4A-203ENST00000584310 ILDR2Q71H61 639 aa21.38■■□□□ 1.01
SCN4A-203ENST00000584310 PLEKHH1Q9ULM0 1364 aa21.37■■□□□ 1.01
SCN4A-203ENST00000584310 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
SCN4A-203ENST00000584310 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
SCN4A-203ENST00000584310 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
SCN4A-203ENST00000584310 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
SCN4A-203ENST00000584310 SOCS7O14512 581 aa21.35■■□□□ 1.01
SCN4A-203ENST00000584310 PSME1Q06323 249 aa21.33■■□□□ 1.01
SCN4A-203ENST00000584310 ZNF772Q68DY9 489 aaPredicted RBP21.33■■□□□ 1.01
SCN4A-203ENST00000584310 DDX17Q92841 729 aaKnown RBP21.33■■□□□ 1.01
SCN4A-203ENST00000584310 SOS2Q07890 1332 aaPredicted RBP21.32■■□□□ 1
SCN4A-203ENST00000584310 FOXO3O43524 673 aa21.32■■□□□ 1
SCN4A-203ENST00000584310 NHSL1Q5SYE7 1610 aa21.32■■□□□ 1
SCN4A-203ENST00000584310 ADGRB1O14514 1584 aa21.31■■□□□ 1
SCN4A-203ENST00000584310 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
SCN4A-203ENST00000584310 PHF8Q9UPP1 1060 aa21.3■■□□□ 1
SCN4A-203ENST00000584310 SHPRHQ149N8 1683 aa21.3■■□□□ 1
SCN4A-203ENST00000584310 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
SCN4A-203ENST00000584310 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
SCN4A-203ENST00000584310 PNPLA6Q8IY17 1366 aa21.28■■□□□ 1
SCN4A-203ENST00000584310 HIRIP3Q9BW71 556 aaPredicted RBP21.28■■□□□ 1
SCN4A-203ENST00000584310 ANKARQ7Z5J8 1434 aa21.27■■□□□ 1
SCN4A-203ENST00000584310 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
SCN4A-203ENST00000584310 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
SCN4A-203ENST00000584310 HAP1P54257 671 aaPredicted RBP21.25■□□□□ 0.99
SCN4A-203ENST00000584310 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
SCN4A-203ENST00000584310 XPCQ01831 940 aaPredicted RBP21.24■□□□□ 0.99
SCN4A-203ENST00000584310 KRT28Q7Z3Y7 464 aa21.24■□□□□ 0.99
SCN4A-203ENST00000584310 C8orf37Q96NL8 207 aa21.24■□□□□ 0.99
SCN4A-203ENST00000584310 FMN2Q9NZ56 1722 aa21.24■□□□□ 0.99
SCN4A-203ENST00000584310 GPRASP1Q5JY77 1395 aa21.23■□□□□ 0.99
SCN4A-203ENST00000584310 NGLY1Q96IV0 654 aa21.23■□□□□ 0.99
SCN4A-203ENST00000584310 KIAA1210Q9ULL0 1709 aa21.23■□□□□ 0.99
SCN4A-203ENST00000584310 ADAMTS2O95450 1211 aa21.22■□□□□ 0.99
SCN4A-203ENST00000584310 RGS17Q9UGC6 210 aaPredicted RBP21.22■□□□□ 0.99
SCN4A-203ENST00000584310 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
SCN4A-203ENST00000584310 NGDNQ8NEJ9 315 aaKnown RBP21.21■□□□□ 0.99
SCN4A-203ENST00000584310 ADGRB2O60241 1585 aa21.21■□□□□ 0.99
SCN4A-203ENST00000584310 LRP6O75581 1613 aa21.21■□□□□ 0.99
SCN4A-203ENST00000584310 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
SCN4A-203ENST00000584310 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
SCN4A-203ENST00000584310 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
SCN4A-203ENST00000584310 PMFBP1Q8TBY8 1022 aa21.19■□□□□ 0.98
SCN4A-203ENST00000584310 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
SCN4A-203ENST00000584310 AFF2P51816 1311 aa21.18■□□□□ 0.98
SCN4A-203ENST00000584310 PXDNQ92626 1479 aa21.18■□□□□ 0.98
SCN4A-203ENST00000584310 TULP4Q9NRJ4 1543 aa21.18■□□□□ 0.98
SCN4A-203ENST00000584310 RXRBP28702 533 aa21.17■□□□□ 0.98
SCN4A-203ENST00000584310 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
SCN4A-203ENST00000584310 SPATA31A3Q5VYP0 1347 aa21.17■□□□□ 0.98
SCN4A-203ENST00000584310 ARHGEF10O15013 1369 aa21.17■□□□□ 0.98
SCN4A-203ENST00000584310 CDK19Q9BWU1 502 aa21.16■□□□□ 0.98
SCN4A-203ENST00000584310 SBNO1A3KN83 1393 aa21.15■□□□□ 0.98
SCN4A-203ENST00000584310 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
SCN4A-203ENST00000584310 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.97
SCN4A-203ENST00000584310 TNS3Q68CZ2 1445 aa21.13■□□□□ 0.97
SCN4A-203ENST00000584310 ARHGEF28Q8N1W1 1705 aaKnown RBP21.13■□□□□ 0.97
SCN4A-203ENST00000584310 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
SCN4A-203ENST00000584310 USP21Q9UK80 565 aa21.12■□□□□ 0.97
SCN4A-203ENST00000584310 EVC2Q86UK5 1308 aa21.11■□□□□ 0.97
SCN4A-203ENST00000584310 QTRT2Q9H974 415 aaKnown RBP21.11■□□□□ 0.97
SCN4A-203ENST00000584310 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
SCN4A-203ENST00000584310 TRPC5Q9UL62 973 aaPredicted RBP21.1■□□□□ 0.97
SCN4A-203ENST00000584310 COL22A1Q8NFW1 1626 aaPredicted RBP21.09■□□□□ 0.97
SCN4A-203ENST00000584310 PRR36Q9H6K5 1346 aa21.08■□□□□ 0.97
SCN4A-203ENST00000584310 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
SCN4A-203ENST00000584310 RBM6P78332 1123 aaKnown RBP21.08■□□□□ 0.97
SCN4A-203ENST00000584310 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
SCN4A-203ENST00000584310 FNBP4Q8N3X1 1017 aaPredicted RBP21.06■□□□□ 0.96
SCN4A-203ENST00000584310 ITSN1Q15811 1721 aa21.05■□□□□ 0.96
SCN4A-203ENST00000584310 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
SCN4A-203ENST00000584310 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
SCN4A-203ENST00000584310 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
SCN4A-203ENST00000584310 ATP7BP35670 1465 aa21.04■□□□□ 0.96
SCN4A-203ENST00000584310 RGPD8O14715 1765 aaPredicted RBP21.04■□□□□ 0.96
SCN4A-203ENST00000584310 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
SCN4A-203ENST00000584310 PLEKHG3A1L390 1219 aa21.03■□□□□ 0.96
SCN4A-203ENST00000584310 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
SCN4A-203ENST00000584310 ACEP12821 1306 aa21.03■□□□□ 0.96
SCN4A-203ENST00000584310 NBPF8Q3BBV2 869 aa21.02■□□□□ 0.96
SCN4A-203ENST00000584310 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
SCN4A-203ENST00000584310 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
SCN4A-203ENST00000584310 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
SCN4A-203ENST00000584310 PPIP5K1Q6PFW1 1433 aa21■□□□□ 0.95
SCN4A-203ENST00000584310 UNC5CLQ8IV45 518 aa20.99■□□□□ 0.95
SCN4A-203ENST00000584310 QRICH2Q9H0J4 1663 aa20.99■□□□□ 0.95
SCN4A-203ENST00000584310 POLR3AO14802 1390 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms