RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
ERBB2-216ENST00000584014 MSH6P52701 1360 aa11.8□□□□□ -0.52
ERBB2-216ENST00000584014 ABCC11Q96J66 1382 aa11.8□□□□□ -0.52
ERBB2-216ENST00000584014 ADGRB1O14514 1584 aa11.8□□□□□ -0.52
ERBB2-216ENST00000584014 XIRP1Q702N8 1843 aaKnown RBP11.8□□□□□ -0.52
ERBB2-216ENST00000584014 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
ERBB2-216ENST00000584014 KNDC1Q76NI1 1749 aa11.78□□□□□ -0.52
ERBB2-216ENST00000584014 TOM1O60784 492 aa11.78□□□□□ -0.52
ERBB2-216ENST00000584014 MYT1Q01538 1121 aa11.78□□□□□ -0.52
ERBB2-216ENST00000584014 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
ERBB2-216ENST00000584014 PTCH1Q13635 1447 aa11.77□□□□□ -0.52
ERBB2-216ENST00000584014 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-216ENST00000584014 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
ERBB2-216ENST00000584014 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
ERBB2-216ENST00000584014 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-216ENST00000584014 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
ERBB2-216ENST00000584014 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 SIRT1Q96EB6 747 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
ERBB2-216ENST00000584014 TECPR2O15040 1411 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 ADGRL3Q9HAR2 1447 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
ERBB2-216ENST00000584014 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
ERBB2-216ENST00000584014 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
ERBB2-216ENST00000584014 POLR3GLQ9BT43 218 aa11.74□□□□□ -0.53
ERBB2-216ENST00000584014 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
ERBB2-216ENST00000584014 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
ERBB2-216ENST00000584014 USP47Q96K76 1375 aa11.73□□□□□ -0.53
ERBB2-216ENST00000584014 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
ERBB2-216ENST00000584014 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
ERBB2-216ENST00000584014 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
ERBB2-216ENST00000584014 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
ERBB2-216ENST00000584014 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
ERBB2-216ENST00000584014 ESCO1Q5FWF5 840 aa11.72□□□□□ -0.53
ERBB2-216ENST00000584014 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
ERBB2-216ENST00000584014 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.53
ERBB2-216ENST00000584014 WASLO00401 505 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-216ENST00000584014 EIF4G2P78344 907 aaKnown RBP eCLIP11.71□□□□□ -0.53
ERBB2-216ENST00000584014 HSPA5P11021 654 aaKnown RBP11.7□□□□□ -0.54
ERBB2-216ENST00000584014 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
ERBB2-216ENST00000584014 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
ERBB2-216ENST00000584014 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
ERBB2-216ENST00000584014 PMFBP1Q8TBY8 1022 aa11.69□□□□□ -0.54
ERBB2-216ENST00000584014 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
ERBB2-216ENST00000584014 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
ERBB2-216ENST00000584014 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
ERBB2-216ENST00000584014 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
ERBB2-216ENST00000584014 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
ERBB2-216ENST00000584014 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 NUDT16Q96DE0 195 aaKnown RBP11.67□□□□□ -0.54
ERBB2-216ENST00000584014 ROBO1Q9Y6N7 1651 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 DCCP43146 1447 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 MST1RQ04912 1400 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
ERBB2-216ENST00000584014 C1orf167Q5SNV9 1468 aa11.66□□□□□ -0.54
ERBB2-216ENST00000584014 FOXO3O43524 673 aa11.66□□□□□ -0.54
ERBB2-216ENST00000584014 TMF1P82094 1093 aa11.66□□□□□ -0.54
ERBB2-216ENST00000584014 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
ERBB2-216ENST00000584014 NGDNQ8NEJ9 315 aaKnown RBP11.65□□□□□ -0.54
ERBB2-216ENST00000584014 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
ERBB2-216ENST00000584014 PRR36Q9H6K5 1346 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 HSPA1LP34931 641 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 PSME1Q06323 249 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 LMOD2Q6P5Q4 547 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
ERBB2-216ENST00000584014 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-216ENST00000584014 TESK2Q96S53 571 aa11.63□□□□□ -0.55
ERBB2-216ENST00000584014 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
ERBB2-216ENST00000584014 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
ERBB2-216ENST00000584014 USP32Q8NFA0 1604 aa11.62□□□□□ -0.55
ERBB2-216ENST00000584014 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
ERBB2-216ENST00000584014 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
ERBB2-216ENST00000584014 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
ERBB2-216ENST00000584014 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
ERBB2-216ENST00000584014 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
ERBB2-216ENST00000584014 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
ERBB2-216ENST00000584014 ANKARQ7Z5J8 1434 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 ITSN1Q15811 1721 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
ERBB2-216ENST00000584014 ACEP12821 1306 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
ERBB2-216ENST00000584014 ATP7BP35670 1465 aa11.59□□□□□ -0.55
ERBB2-216ENST00000584014 SBNO2Q9Y2G9 1366 aa11.59□□□□□ -0.55
ERBB2-216ENST00000584014 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.56
ERBB2-216ENST00000584014 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
ERBB2-216ENST00000584014 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
ERBB2-216ENST00000584014 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
ERBB2-216ENST00000584014 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
ERBB2-216ENST00000584014 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
ERBB2-216ENST00000584014 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
ERBB2-216ENST00000584014 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
ERBB2-216ENST00000584014 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
ERBB2-216ENST00000584014 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
ERBB2-216ENST00000584014 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
ERBB2-216ENST00000584014 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms