RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 HSPA1LP34931 641 aa12.72□□□□□ -0.37
PPP4R1-225ENST00000583438 NLRP1Q9C000 1473 aa12.72□□□□□ -0.37
PPP4R1-225ENST00000583438 SYNMO15061 1565 aa12.71□□□□□ -0.37
PPP4R1-225ENST00000583438 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
PPP4R1-225ENST00000583438 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-225ENST00000583438 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
PPP4R1-225ENST00000583438 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-225ENST00000583438 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-225ENST00000583438 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-225ENST00000583438 PLCG2P16885 1265 aa12.69□□□□□ -0.38
PPP4R1-225ENST00000583438 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
PPP4R1-225ENST00000583438 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
PPP4R1-225ENST00000583438 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
PPP4R1-225ENST00000583438 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
PPP4R1-225ENST00000583438 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
PPP4R1-225ENST00000583438 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
PPP4R1-225ENST00000583438 WASHC2CQ9Y4E1 1318 aa12.66□□□□□ -0.38
PPP4R1-225ENST00000583438 PTPN23Q9H3S7 1636 aa12.66□□□□□ -0.38
PPP4R1-225ENST00000583438 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 SEC24BO95487 1268 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 C7P10643 843 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 SLIT1O75093 1534 aa12.65□□□□□ -0.38
PPP4R1-225ENST00000583438 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
PPP4R1-225ENST00000583438 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
PPP4R1-225ENST00000583438 ABCC5O15440 1437 aa12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 LTKP29376 864 aa12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
PPP4R1-225ENST00000583438 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-225ENST00000583438 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
PPP4R1-225ENST00000583438 TMEM121BQ9BXQ6 578 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-225ENST00000583438 BCANQ96GW7 911 aa12.6□□□□□ -0.39
PPP4R1-225ENST00000583438 TET3O43151 1660 aa12.6□□□□□ -0.39
PPP4R1-225ENST00000583438 PDE4AP27815 886 aa12.59□□□□□ -0.39
PPP4R1-225ENST00000583438 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-225ENST00000583438 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-225ENST00000583438 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
PPP4R1-225ENST00000583438 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
PPP4R1-225ENST00000583438 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
PPP4R1-225ENST00000583438 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
PPP4R1-225ENST00000583438 GCC2Q8IWJ2 1684 aa12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 NWD1Q149M9 1564 aa12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 DAPK1P53355 1430 aa12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 LMTK2Q8IWU2 1503 aa12.57□□□□□ -0.4
PPP4R1-225ENST00000583438 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
PPP4R1-225ENST00000583438 TOM1O60784 492 aa12.56□□□□□ -0.4
PPP4R1-225ENST00000583438 MFSD10Q14728 455 aa12.56□□□□□ -0.4
PPP4R1-225ENST00000583438 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
PPP4R1-225ENST00000583438 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
PPP4R1-225ENST00000583438 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
PPP4R1-225ENST00000583438 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
PPP4R1-225ENST00000583438 G3V3G9 751 aa12.54□□□□□ -0.4
PPP4R1-225ENST00000583438 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
PPP4R1-225ENST00000583438 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
PPP4R1-225ENST00000583438 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-225ENST00000583438 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
PPP4R1-225ENST00000583438 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-225ENST00000583438 RRP7BPQ9NSQ0 103 aa12.52□□□□□ -0.41
PPP4R1-225ENST00000583438 NOS1P29475 1434 aa12.52□□□□□ -0.41
PPP4R1-225ENST00000583438 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
PPP4R1-225ENST00000583438 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-225ENST00000583438 E9PCH4 1651 aa12.51□□□□□ -0.41
PPP4R1-225ENST00000583438 ADGRL2O95490 1459 aa12.49□□□□□ -0.41
PPP4R1-225ENST00000583438 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
PPP4R1-225ENST00000583438 E2F4Q16254 413 aa12.49□□□□□ -0.41
PPP4R1-225ENST00000583438 TXNDC2Q86VQ3 553 aa12.49□□□□□ -0.41
PPP4R1-225ENST00000583438 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 UNC13BO14795 1591 aa12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 TMEM94Q12767 1356 aa12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 IDI1Q13907 227 aa12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-225ENST00000583438 C2orf72A6NCS6 295 aa12.47□□□□□ -0.41
PPP4R1-225ENST00000583438 KIF3CO14782 793 aa12.47□□□□□ -0.41
PPP4R1-225ENST00000583438 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
PPP4R1-225ENST00000583438 DSG2Q14126 1118 aa12.46□□□□□ -0.41
PPP4R1-225ENST00000583438 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.41
PPP4R1-225ENST00000583438 CHIC2Q9UKJ5 165 aa12.46□□□□□ -0.41
PPP4R1-225ENST00000583438 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 NRXN3Q9Y4C0 1643 aa12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 NBR1Q14596 966 aa12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-225ENST00000583438 POTEAQ6S8J7 498 aa12.44□□□□□ -0.42
PPP4R1-225ENST00000583438 LRP6O75581 1613 aa12.44□□□□□ -0.42
PPP4R1-225ENST00000583438 FOXK1P85037 733 aa12.43□□□□□ -0.42
PPP4R1-225ENST00000583438 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
PPP4R1-225ENST00000583438 IQGAP3Q86VI3 1631 aa12.42□□□□□ -0.42
PPP4R1-225ENST00000583438 ADAMTS13Q76LX8 1427 aa12.41□□□□□ -0.42
PPP4R1-225ENST00000583438 ANKRD30AQ9BXX3 1397 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms