RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 COL16A1Q07092 1604 aaPredicted RBP20.21■□□□□ 0.83
GGA3-215ENST00000582821 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
GGA3-215ENST00000582821 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
GGA3-215ENST00000582821 MED1Q15648 1581 aaPredicted RBP20.2■□□□□ 0.82
GGA3-215ENST00000582821 JCADQ9P266 1359 aa20.2■□□□□ 0.82
GGA3-215ENST00000582821 PRAM1Q96QH2 718 aa20.19■□□□□ 0.82
GGA3-215ENST00000582821 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
GGA3-215ENST00000582821 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
GGA3-215ENST00000582821 NEUROD1Q13562 356 aa20.17■□□□□ 0.82
GGA3-215ENST00000582821 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
GGA3-215ENST00000582821 POGKQ9P215 609 aa20.17■□□□□ 0.82
GGA3-215ENST00000582821 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
GGA3-215ENST00000582821 FMN2Q9NZ56 1722 aa20.13■□□□□ 0.81
GGA3-215ENST00000582821 SOS2Q07890 1332 aaPredicted RBP20.12■□□□□ 0.81
GGA3-215ENST00000582821 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
GGA3-215ENST00000582821 NBPF1Q3BBV0 1214 aa20.12■□□□□ 0.81
GGA3-215ENST00000582821 ESCO1Q5FWF5 840 aa20.12■□□□□ 0.81
GGA3-215ENST00000582821 SPATA31A6Q5VVP1 1343 aa20.11■□□□□ 0.81
GGA3-215ENST00000582821 DDX17Q92841 729 aaKnown RBP20.11■□□□□ 0.81
GGA3-215ENST00000582821 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
GGA3-215ENST00000582821 ADGRB2O60241 1585 aa20.09■□□□□ 0.81
GGA3-215ENST00000582821 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
GGA3-215ENST00000582821 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.81
GGA3-215ENST00000582821 NUTM2FA1L443 756 aa20.08■□□□□ 0.81
GGA3-215ENST00000582821 ILDR2Q71H61 639 aa20.07■□□□□ 0.8
GGA3-215ENST00000582821 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
GGA3-215ENST00000582821 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
GGA3-215ENST00000582821 MINK1Q8N4C8 1332 aaPredicted RBP20.05■□□□□ 0.8
GGA3-215ENST00000582821 ANKARQ7Z5J8 1434 aa20.05■□□□□ 0.8
GGA3-215ENST00000582821 WASLO00401 505 aaPredicted RBP20.05■□□□□ 0.8
GGA3-215ENST00000582821 FOXO3O43524 673 aa20.05■□□□□ 0.8
GGA3-215ENST00000582821 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
GGA3-215ENST00000582821 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
GGA3-215ENST00000582821 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
GGA3-215ENST00000582821 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
GGA3-215ENST00000582821 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
GGA3-215ENST00000582821 PHF8Q9UPP1 1060 aa20.03■□□□□ 0.8
GGA3-215ENST00000582821 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
GGA3-215ENST00000582821 KIF1AQ12756 1690 aa20.03■□□□□ 0.8
GGA3-215ENST00000582821 NBPF8Q3BBV2 869 aa20.02■□□□□ 0.8
GGA3-215ENST00000582821 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
GGA3-215ENST00000582821 PXDNQ92626 1479 aa20.02■□□□□ 0.8
GGA3-215ENST00000582821 USP32Q8NFA0 1604 aa20.01■□□□□ 0.79
GGA3-215ENST00000582821 LRP6O75581 1613 aa20■□□□□ 0.79
GGA3-215ENST00000582821 TULP4Q9NRJ4 1543 aa19.99■□□□□ 0.79
GGA3-215ENST00000582821 PRR36Q9H6K5 1346 aa19.99■□□□□ 0.79
GGA3-215ENST00000582821 CENPJQ9HC77 1338 aaPredicted RBP19.99■□□□□ 0.79
GGA3-215ENST00000582821 GPRASP1Q5JY77 1395 aa19.98■□□□□ 0.79
GGA3-215ENST00000582821 KRT28Q7Z3Y7 464 aa19.98■□□□□ 0.79
GGA3-215ENST00000582821 CLSPNQ9HAW4 1339 aa19.98■□□□□ 0.79
GGA3-215ENST00000582821 ROCK2O75116 1388 aaKnown RBP19.97■□□□□ 0.79
GGA3-215ENST00000582821 PSME1Q06323 249 aa19.97■□□□□ 0.79
GGA3-215ENST00000582821 CDK19Q9BWU1 502 aa19.97■□□□□ 0.79
GGA3-215ENST00000582821 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
GGA3-215ENST00000582821 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
GGA3-215ENST00000582821 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
GGA3-215ENST00000582821 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
GGA3-215ENST00000582821 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
GGA3-215ENST00000582821 COL22A1Q8NFW1 1626 aaPredicted RBP19.95■□□□□ 0.78
GGA3-215ENST00000582821 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
GGA3-215ENST00000582821 MEX3CQ5U5Q3 659 aaKnown RBP19.94■□□□□ 0.78
GGA3-215ENST00000582821 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
GGA3-215ENST00000582821 SBNO1A3KN83 1393 aa19.93■□□□□ 0.78
GGA3-215ENST00000582821 POTEAQ6S8J7 498 aa19.92■□□□□ 0.78
GGA3-215ENST00000582821 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
GGA3-215ENST00000582821 CCDC61Q9Y6R9 512 aa19.92■□□□□ 0.78
GGA3-215ENST00000582821 ATP7BP35670 1465 aa19.92■□□□□ 0.78
GGA3-215ENST00000582821 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
GGA3-215ENST00000582821 ITSN1Q15811 1721 aa19.9■□□□□ 0.78
GGA3-215ENST00000582821 RALGAPBQ86X10 1494 aa19.9■□□□□ 0.78
GGA3-215ENST00000582821 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
GGA3-215ENST00000582821 PLEKHG3A1L390 1219 aa19.89■□□□□ 0.77
GGA3-215ENST00000582821 SOCS7O14512 581 aa19.89■□□□□ 0.77
GGA3-215ENST00000582821 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
GGA3-215ENST00000582821 TNS3Q68CZ2 1445 aa19.88■□□□□ 0.77
GGA3-215ENST00000582821 NGDNQ8NEJ9 315 aaKnown RBP19.88■□□□□ 0.77
GGA3-215ENST00000582821 EVC2Q86UK5 1308 aa19.86■□□□□ 0.77
GGA3-215ENST00000582821 ADAMTS2O95450 1211 aa19.86■□□□□ 0.77
GGA3-215ENST00000582821 SRPK2P78362 688 aaKnown RBP19.86■□□□□ 0.77
GGA3-215ENST00000582821 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
GGA3-215ENST00000582821 POLR3AO14802 1390 aaPredicted RBP19.85■□□□□ 0.77
GGA3-215ENST00000582821 ARHGEF10O15013 1369 aa19.85■□□□□ 0.77
GGA3-215ENST00000582821 TOPAZ1Q8N9V7 1692 aa19.85■□□□□ 0.77
GGA3-215ENST00000582821 AFF2P51816 1311 aa19.85■□□□□ 0.77
GGA3-215ENST00000582821 C8orf37Q96NL8 207 aa19.85■□□□□ 0.77
GGA3-215ENST00000582821 CABP2Q9NPB3 220 aa19.85■□□□□ 0.77
GGA3-215ENST00000582821 SBNO2Q9Y2G9 1366 aa19.84■□□□□ 0.77
GGA3-215ENST00000582821 NGLY1Q96IV0 654 aa19.84■□□□□ 0.77
GGA3-215ENST00000582821 FNBP4Q8N3X1 1017 aaPredicted RBP19.83■□□□□ 0.77
GGA3-215ENST00000582821 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
GGA3-215ENST00000582821 ACEP12821 1306 aa19.82■□□□□ 0.76
GGA3-215ENST00000582821 ALS2Q96Q42 1657 aa19.81■□□□□ 0.76
GGA3-215ENST00000582821 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
GGA3-215ENST00000582821 PPIP5K1Q6PFW1 1433 aa19.79■□□□□ 0.76
GGA3-215ENST00000582821 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
GGA3-215ENST00000582821 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
GGA3-215ENST00000582821 QTRT2Q9H974 415 aaKnown RBP19.78■□□□□ 0.76
GGA3-215ENST00000582821 CABP1Q9NZU7 370 aa19.78■□□□□ 0.76
GGA3-215ENST00000582821 PAK3O75914 559 aaPredicted RBP19.77■□□□□ 0.76
GGA3-215ENST00000582821 RXRBP28702 533 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms