RNA–Protein interactions for RNA: ENST00000582789.5

SENP3-207, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-207ENST00000582789 RAB11FIP3O75154 756 aa8.65□□□□□ -1.02
SENP3-207ENST00000582789 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
SENP3-207ENST00000582789 ZC3H6P61129 1189 aaKnown RBP8.65□□□□□ -1.02
SENP3-207ENST00000582789 FAM50AQ14320 339 aaKnown RBP8.65□□□□□ -1.02
SENP3-207ENST00000582789 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
SENP3-207ENST00000582789 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
SENP3-207ENST00000582789 SF3A1Q15459 793 aaKnown RBP8.64□□□□□ -1.03
SENP3-207ENST00000582789 AMHR2Q16671 573 aa8.64□□□□□ -1.03
SENP3-207ENST00000582789 ZNF787Q6DD87 383 aa8.64□□□□□ -1.03
SENP3-207ENST00000582789 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
SENP3-207ENST00000582789 SGSM3Q96HU1 749 aa8.64□□□□□ -1.03
SENP3-207ENST00000582789 PPP1R1BQ9UD71 204 aaPredicted RBP8.64□□□□□ -1.03
SENP3-207ENST00000582789 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
SENP3-207ENST00000582789 TBC1D12O60347 775 aa8.63□□□□□ -1.03
SENP3-207ENST00000582789 TMC2Q8TDI7 906 aa8.63□□□□□ -1.03
SENP3-207ENST00000582789 KDM4FA0A1W2PPD8 638 aa8.61□□□□□ -1.03
SENP3-207ENST00000582789 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
SENP3-207ENST00000582789 ZNF16P17020 682 aaPredicted RBP8.61□□□□□ -1.03
SENP3-207ENST00000582789 RALBP1Q15311 655 aa8.61□□□□□ -1.03
SENP3-207ENST00000582789 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
SENP3-207ENST00000582789 MORC4Q8TE76 937 aa8.61□□□□□ -1.03
SENP3-207ENST00000582789 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
SENP3-207ENST00000582789 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
SENP3-207ENST00000582789 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
SENP3-207ENST00000582789 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
SENP3-207ENST00000582789 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
SENP3-207ENST00000582789 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
SENP3-207ENST00000582789 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
SENP3-207ENST00000582789 HMGB1P1B2RPK0 211 aaPredicted RBP8.59□□□□□ -1.03
SENP3-207ENST00000582789 BHMG1C9JSJ3 638 aaPredicted RBP8.59□□□□□ -1.03
SENP3-207ENST00000582789 ERCC3P19447 782 aa8.59□□□□□ -1.03
SENP3-207ENST00000582789 BAZ1AQ9NRL2 1556 aaPredicted RBP8.59□□□□□ -1.03
SENP3-207ENST00000582789 EIF4G1Q04637 1599 aaKnown RBP8.58□□□□□ -1.04
SENP3-207ENST00000582789 FOSBP53539 338 aa8.58□□□□□ -1.04
SENP3-207ENST00000582789 SLC4A5Q9BY07 1137 aa8.58□□□□□ -1.04
SENP3-207ENST00000582789 METTL14Q9HCE5 456 aaKnown RBP8.58□□□□□ -1.04
SENP3-207ENST00000582789 GNEQ9Y223 722 aaKnown RBP8.58□□□□□ -1.04
SENP3-207ENST00000582789 CC2D2AQ9P2K1 1620 aa8.58□□□□□ -1.04
SENP3-207ENST00000582789 MLLT3P42568 568 aaPredicted RBP8.57□□□□□ -1.04
SENP3-207ENST00000582789 NAALADL2Q58DX5 795 aa8.57□□□□□ -1.04
SENP3-207ENST00000582789 DNAJC14Q6Y2X3 702 aaPredicted RBP8.57□□□□□ -1.04
SENP3-207ENST00000582789 FAM43BQ6ZT52 329 aaPredicted RBP8.57□□□□□ -1.04
SENP3-207ENST00000582789 FBXO22Q8NEZ5 403 aa8.57□□□□□ -1.04
SENP3-207ENST00000582789 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
SENP3-207ENST00000582789 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
SENP3-207ENST00000582789 UBA5Q9GZZ9 404 aa8.57□□□□□ -1.04
SENP3-207ENST00000582789 MINK1Q8N4C8 1332 aaPredicted RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 FOXD4L6Q3SYB3 417 aaPredicted RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 SH3D19Q5HYK7 790 aa8.56□□□□□ -1.04
SENP3-207ENST00000582789 FOXD4L3Q6VB84 417 aaPredicted RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
SENP3-207ENST00000582789 NME8Q8N427 588 aa8.56□□□□□ -1.04
SENP3-207ENST00000582789 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 MAGEC2Q9UBF1 373 aaPredicted RBP8.56□□□□□ -1.04
SENP3-207ENST00000582789 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
SENP3-207ENST00000582789 GPR37O15354 613 aa8.55□□□□□ -1.04
SENP3-207ENST00000582789 GLMNQ92990 594 aa8.55□□□□□ -1.04
SENP3-207ENST00000582789 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
SENP3-207ENST00000582789 NRG2O14511 850 aaPredicted RBP8.54□□□□□ -1.04
SENP3-207ENST00000582789 PEX14O75381 377 aa8.54□□□□□ -1.04
SENP3-207ENST00000582789 NEFMP07197 916 aa8.54□□□□□ -1.04
SENP3-207ENST00000582789 SMC5Q8IY18 1101 aa8.54□□□□□ -1.04
SENP3-207ENST00000582789 KLHL42Q9P2K6 505 aa8.54□□□□□ -1.04
SENP3-207ENST00000582789 WIZO95785 1651 aa8.53□□□□□ -1.04
SENP3-207ENST00000582789 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
SENP3-207ENST00000582789 BCL2L13Q9BXK5 485 aa8.53□□□□□ -1.04
SENP3-207ENST00000582789 KCNC4Q03721 635 aa8.52□□□□□ -1.05
SENP3-207ENST00000582789 OS9Q13438 667 aaPredicted RBP8.52□□□□□ -1.05
SENP3-207ENST00000582789 NOP9Q86U38 636 aaKnown RBP8.52□□□□□ -1.05
SENP3-207ENST00000582789 GPATCH3Q96I76 525 aa8.52□□□□□ -1.05
SENP3-207ENST00000582789 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
SENP3-207ENST00000582789 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
SENP3-207ENST00000582789 MAP2K5Q13163 448 aa8.51□□□□□ -1.05
SENP3-207ENST00000582789 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
SENP3-207ENST00000582789 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
SENP3-207ENST00000582789 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 PPFIA4O75335 1185 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 VAMP1P23763 118 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 GIPC2Q8TF65 315 aa8.5□□□□□ -1.05
SENP3-207ENST00000582789 PTMAP06454 111 aaKnown RBP8.49□□□□□ -1.05
SENP3-207ENST00000582789 MS4A1P11836 297 aa8.49□□□□□ -1.05
SENP3-207ENST00000582789 TTLL12Q14166 644 aaPredicted RBP8.49□□□□□ -1.05
SENP3-207ENST00000582789 LONRF3Q496Y0 759 aa8.49□□□□□ -1.05
SENP3-207ENST00000582789 WWC1Q8IX03 1113 aa8.49□□□□□ -1.05
SENP3-207ENST00000582789 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
SENP3-207ENST00000582789 EVI5LQ96CN4 794 aa8.49□□□□□ -1.05
SENP3-207ENST00000582789 SMARCA4P51532 1647 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 CCDC194A0A1B0GVG4 234 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 IRF6O14896 467 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 CREB3O43889 395 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 EIF3JO75822 258 aaKnown RBP8.48□□□□□ -1.05
SENP3-207ENST00000582789 RTL5Q5HYW3 569 aaPredicted RBP8.48□□□□□ -1.05
SENP3-207ENST00000582789 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
SENP3-207ENST00000582789 CLSPNQ9HAW4 1339 aa8.48□□□□□ -1.05
SENP3-207ENST00000582789 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
SENP3-207ENST00000582789 POM121CA8CG34 1229 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms