RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
CDK5RAP3-222ENST00000581708 LRRC59Q96AG4 307 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-222ENST00000581708 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
CDK5RAP3-222ENST00000581708 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
CDK5RAP3-222ENST00000581708 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
CDK5RAP3-222ENST00000581708 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
CDK5RAP3-222ENST00000581708 SOS2Q07890 1332 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-222ENST00000581708 KDM2AQ9Y2K7 1162 aa18.3■□□□□ 0.52
CDK5RAP3-222ENST00000581708 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
CDK5RAP3-222ENST00000581708 NPHP3Q7Z494 1330 aa18.29■□□□□ 0.52
CDK5RAP3-222ENST00000581708 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
CDK5RAP3-222ENST00000581708 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP3-222ENST00000581708 FMN2Q9NZ56 1722 aa18.27■□□□□ 0.52
CDK5RAP3-222ENST00000581708 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.52
CDK5RAP3-222ENST00000581708 PRAM1Q96QH2 718 aa18.27■□□□□ 0.52
CDK5RAP3-222ENST00000581708 POGKQ9P215 609 aa18.26■□□□□ 0.51
CDK5RAP3-222ENST00000581708 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
CDK5RAP3-222ENST00000581708 KIAA1210Q9ULL0 1709 aa18.26■□□□□ 0.51
CDK5RAP3-222ENST00000581708 LRP6O75581 1613 aa18.25■□□□□ 0.51
CDK5RAP3-222ENST00000581708 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
CDK5RAP3-222ENST00000581708 KIF1AQ12756 1690 aa18.25■□□□□ 0.51
CDK5RAP3-222ENST00000581708 MEX3CQ5U5Q3 659 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-222ENST00000581708 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-222ENST00000581708 ZNF772Q68DY9 489 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-222ENST00000581708 DDX17Q92841 729 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-222ENST00000581708 ANKARQ7Z5J8 1434 aa18.23■□□□□ 0.51
CDK5RAP3-222ENST00000581708 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
CDK5RAP3-222ENST00000581708 PXDNQ92626 1479 aa18.21■□□□□ 0.51
CDK5RAP3-222ENST00000581708 FOXO3O43524 673 aa18.2■□□□□ 0.5
CDK5RAP3-222ENST00000581708 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-222ENST00000581708 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-222ENST00000581708 POTEAQ6S8J7 498 aa18.19■□□□□ 0.5
CDK5RAP3-222ENST00000581708 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-222ENST00000581708 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-222ENST00000581708 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-222ENST00000581708 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
CDK5RAP3-222ENST00000581708 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDK5RAP3-222ENST00000581708 PHF8Q9UPP1 1060 aa18.17■□□□□ 0.5
CDK5RAP3-222ENST00000581708 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-222ENST00000581708 PSME1Q06323 249 aa18.16■□□□□ 0.5
CDK5RAP3-222ENST00000581708 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-222ENST00000581708 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
CDK5RAP3-222ENST00000581708 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
CDK5RAP3-222ENST00000581708 RGPD8O14715 1765 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-222ENST00000581708 KRT28Q7Z3Y7 464 aa18.13■□□□□ 0.49
CDK5RAP3-222ENST00000581708 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
CDK5RAP3-222ENST00000581708 AFF2P51816 1311 aa18.12■□□□□ 0.49
CDK5RAP3-222ENST00000581708 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-222ENST00000581708 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
CDK5RAP3-222ENST00000581708 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
CDK5RAP3-222ENST00000581708 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
CDK5RAP3-222ENST00000581708 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
CDK5RAP3-222ENST00000581708 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-222ENST00000581708 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
CDK5RAP3-222ENST00000581708 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
CDK5RAP3-222ENST00000581708 RXRBP28702 533 aa18.08■□□□□ 0.48
CDK5RAP3-222ENST00000581708 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-222ENST00000581708 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
CDK5RAP3-222ENST00000581708 ITSN1Q15811 1721 aa18.07■□□□□ 0.48
CDK5RAP3-222ENST00000581708 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
CDK5RAP3-222ENST00000581708 PRR36Q9H6K5 1346 aa18.06■□□□□ 0.48
CDK5RAP3-222ENST00000581708 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-222ENST00000581708 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
CDK5RAP3-222ENST00000581708 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP3-222ENST00000581708 ATP7BP35670 1465 aa18.05■□□□□ 0.48
CDK5RAP3-222ENST00000581708 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-222ENST00000581708 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
CDK5RAP3-222ENST00000581708 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-222ENST00000581708 CDK19Q9BWU1 502 aa18.04■□□□□ 0.48
CDK5RAP3-222ENST00000581708 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-222ENST00000581708 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
CDK5RAP3-222ENST00000581708 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-222ENST00000581708 USP21Q9UK80 565 aa18.02■□□□□ 0.48
CDK5RAP3-222ENST00000581708 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
CDK5RAP3-222ENST00000581708 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-222ENST00000581708 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-222ENST00000581708 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
CDK5RAP3-222ENST00000581708 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-222ENST00000581708 TONSLQ96HA7 1378 aa18■□□□□ 0.47
CDK5RAP3-222ENST00000581708 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
CDK5RAP3-222ENST00000581708 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-222ENST00000581708 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
CDK5RAP3-222ENST00000581708 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
CDK5RAP3-222ENST00000581708 ATRNO75882 1429 aa17.98■□□□□ 0.47
CDK5RAP3-222ENST00000581708 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-222ENST00000581708 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
CDK5RAP3-222ENST00000581708 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-222ENST00000581708 LMOD2Q6P5Q4 547 aa17.97■□□□□ 0.47
CDK5RAP3-222ENST00000581708 SLIT2O94813 1529 aa17.97■□□□□ 0.47
CDK5RAP3-222ENST00000581708 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
CDK5RAP3-222ENST00000581708 ABCA3Q99758 1704 aa17.95■□□□□ 0.46
CDK5RAP3-222ENST00000581708 SRPK2P78362 688 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-222ENST00000581708 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
CDK5RAP3-222ENST00000581708 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
CDK5RAP3-222ENST00000581708 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms